RNA–Protein interactions for RNA: ENST00000347598.8

CACNA1C-204, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,655 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-204ENST00000347598 TIRAPP58753 221 aa9.6□□□□□ -0.87
CACNA1C-204ENST00000347598 HIST1H2BLQ99880 126 aa9.6□□□□□ -0.87
CACNA1C-204ENST00000347598 RNASE2P10153 161 aaKnown RBP9.6□□□□□ -0.87
CACNA1C-204ENST00000347598 ICE1Q9Y2F5 2266 aa9.59□□□□□ -0.87
CACNA1C-204ENST00000347598 BUB3O43684 328 aa9.59□□□□□ -0.87
CACNA1C-204ENST00000347598 EGR2P11161 476 aaPredicted RBP9.59□□□□□ -0.87
CACNA1C-204ENST00000347598 NOP10Q9NPE3 64 aaKnown RBP9.59□□□□□ -0.87
CACNA1C-204ENST00000347598 RNASE13Q5GAN3 156 aaKnown RBP9.59□□□□□ -0.87
CACNA1C-204ENST00000347598 J3QLI3 93 aa9.59□□□□□ -0.87
CACNA1C-204ENST00000347598 SIPA1L3O60292 1781 aaPredicted RBP9.59□□□□□ -0.87
CACNA1C-204ENST00000347598 NDUFB8O95169 186 aa9.59□□□□□ -0.87
CACNA1C-204ENST00000347598 CDKN1BP46527 198 aa9.59□□□□□ -0.87
CACNA1C-204ENST00000347598 STPG4Q8N801 248 aa9.59□□□□□ -0.87
CACNA1C-204ENST00000347598 H0YIZ8 118 aa9.58□□□□□ -0.88
CACNA1C-204ENST00000347598 Q6P435 159 aa9.58□□□□□ -0.88
CACNA1C-204ENST00000347598 DOCK4Q8N1I0 1966 aa9.58□□□□□ -0.88
CACNA1C-204ENST00000347598 PRB2P02812 416 aaPredicted RBP9.58□□□□□ -0.88
CACNA1C-204ENST00000347598 TSSC4Q9Y5U2 329 aaPredicted RBP9.58□□□□□ -0.88
CACNA1C-204ENST00000347598 TRACP01848 142 aa9.58□□□□□ -0.88
CACNA1C-204ENST00000347598 C8orf86Q6ZUL3 223 aa9.58□□□□□ -0.88
CACNA1C-204ENST00000347598 UBE2CO00762 179 aa9.58□□□□□ -0.88
CACNA1C-204ENST00000347598 LINC01551Q86U37 167 aa9.58□□□□□ -0.88
CACNA1C-204ENST00000347598 TRAV13-2A0A0B4J235 113 aa9.58□□□□□ -0.88
CACNA1C-204ENST00000347598 IGHV4-28A0A0C4DH34 117 aa9.58□□□□□ -0.88
CACNA1C-204ENST00000347598 K7ENP7 123 aa9.58□□□□□ -0.88
CACNA1C-204ENST00000347598 ZNF124Q15973 351 aa9.58□□□□□ -0.88
CACNA1C-204ENST00000347598 A0A1B0GUS0 222 aa9.57□□□□□ -0.88
CACNA1C-204ENST00000347598 PFN1P07737 140 aaKnown RBP9.57□□□□□ -0.88
CACNA1C-204ENST00000347598 COL24A1Q17RW2 1714 aa9.57□□□□□ -0.88
CACNA1C-204ENST00000347598 FLVCR1-AS1Q8TAF5 88 aa9.57□□□□□ -0.88
CACNA1C-204ENST00000347598 RP1P56715 2156 aa9.57□□□□□ -0.88
CACNA1C-204ENST00000347598 ETDCA0A1B0GVM5 59 aa9.57□□□□□ -0.88
CACNA1C-204ENST00000347598 IGKV1-16P04430 117 aa9.57□□□□□ -0.88
CACNA1C-204ENST00000347598 LY6G6FQ5SQ64 297 aa9.57□□□□□ -0.88
CACNA1C-204ENST00000347598 TEX36Q5VZQ5 186 aa9.57□□□□□ -0.88
CACNA1C-204ENST00000347598 LAIR2Q6ISS4 152 aa9.57□□□□□ -0.88
CACNA1C-204ENST00000347598 C3orf79P0CE67 100 aa9.57□□□□□ -0.88
CACNA1C-204ENST00000347598 MPV17L2Q567V2 206 aa9.57□□□□□ -0.88
CACNA1C-204ENST00000347598 NMSQ5H8A3 153 aa9.57□□□□□ -0.88
CACNA1C-204ENST00000347598 MRPL52Q86TS9 123 aaKnown RBP9.57□□□□□ -0.88
CACNA1C-204ENST00000347598 HIST3H2BBQ8N257 126 aa9.57□□□□□ -0.88
CACNA1C-204ENST00000347598 FANCMQ8IYD8 2048 aa9.56□□□□□ -0.88
CACNA1C-204ENST00000347598 LINC00479Q96M42 142 aa9.56□□□□□ -0.88
CACNA1C-204ENST00000347598 GFRA4Q9GZZ7 299 aa9.56□□□□□ -0.88
CACNA1C-204ENST00000347598 LRRC37AA6NMS7 1700 aa9.56□□□□□ -0.88
CACNA1C-204ENST00000347598 A0A1W2PPI3 338 aa9.56□□□□□ -0.88
CACNA1C-204ENST00000347598 PDE6HQ13956 83 aa9.56□□□□□ -0.88
CACNA1C-204ENST00000347598 Q6ZS92 163 aa9.56□□□□□ -0.88
CACNA1C-204ENST00000347598 RSPO3Q9BXY4 272 aaPredicted RBP9.56□□□□□ -0.88
CACNA1C-204ENST00000347598 REG4Q9BYZ8 158 aa9.56□□□□□ -0.88
CACNA1C-204ENST00000347598 F8W735 103 aaPredicted RBP9.56□□□□□ -0.88
CACNA1C-204ENST00000347598 ZNF134P52741 427 aa9.56□□□□□ -0.88
CACNA1C-204ENST00000347598 SLAQ13239 276 aa9.56□□□□□ -0.88
CACNA1C-204ENST00000347598 FAM120AOSQ5T036 256 aa9.56□□□□□ -0.88
CACNA1C-204ENST00000347598 UTF1Q5T230 341 aa9.56□□□□□ -0.88
CACNA1C-204ENST00000347598 C2orf66Q6UXQ4 117 aa9.56□□□□□ -0.88
CACNA1C-204ENST00000347598 C1orf43Q9BWL3 253 aa9.56□□□□□ -0.88
CACNA1C-204ENST00000347598 ARID2Q68CP9 1835 aa9.56□□□□□ -0.88
CACNA1C-204ENST00000347598 BRCA1P38398 1863 aaKnown RBP9.56□□□□□ -0.88
CACNA1C-204ENST00000347598 NDUFA4O00483 81 aa9.55□□□□□ -0.88
CACNA1C-204ENST00000347598 HERVK_113P63121 156 aa9.55□□□□□ -0.88
CACNA1C-204ENST00000347598 Q8N8P6 123 aa9.55□□□□□ -0.88
CACNA1C-204ENST00000347598 CCL18P55774 89 aa9.55□□□□□ -0.88
CACNA1C-204ENST00000347598 C9orf66Q5T8R8 295 aa9.55□□□□□ -0.88
CACNA1C-204ENST00000347598 PRSS46E5RG02 174 aa9.55□□□□□ -0.88
CACNA1C-204ENST00000347598 FGF6P10767 208 aa9.55□□□□□ -0.88
CACNA1C-204ENST00000347598 IGHV3-30P01768 117 aa9.55□□□□□ -0.88
CACNA1C-204ENST00000347598 IGHV3-33P01772 117 aa9.55□□□□□ -0.88
CACNA1C-204ENST00000347598 IGHV3-30-3P0DP02 117 aa9.55□□□□□ -0.88
CACNA1C-204ENST00000347598 IGHV3-30-5P0DP03 117 aa9.55□□□□□ -0.88
CACNA1C-204ENST00000347598 BTCP35070 178 aa9.55□□□□□ -0.88
CACNA1C-204ENST00000347598 CCL24O00175 119 aa9.55□□□□□ -0.88
CACNA1C-204ENST00000347598 MPZP25189 248 aa9.55□□□□□ -0.88
CACNA1C-204ENST00000347598 LMO1P25800 156 aa9.55□□□□□ -0.88
CACNA1C-204ENST00000347598 CFHR4Q92496 578 aa9.55□□□□□ -0.88
CACNA1C-204ENST00000347598 SDHAF1A6NFY7 115 aa9.54□□□□□ -0.88
CACNA1C-204ENST00000347598 C15orf62A8K5M9 175 aa9.54□□□□□ -0.88
CACNA1C-204ENST00000347598 UBE2AP49459 152 aa9.54□□□□□ -0.88
CACNA1C-204ENST00000347598 LYPD3O95274 346 aa9.54□□□□□ -0.88
CACNA1C-204ENST00000347598 NDUFA12Q9UI09 145 aa9.54□□□□□ -0.88
CACNA1C-204ENST00000347598 SHISA9B4DS77 424 aa9.54□□□□□ -0.88
CACNA1C-204ENST00000347598 COL5A3P25940 1745 aaPredicted RBP9.54□□□□□ -0.88
CACNA1C-204ENST00000347598 PRSS57Q6UWY2 283 aa9.54□□□□□ -0.88
CACNA1C-204ENST00000347598 RHOHQ15669 191 aa9.54□□□□□ -0.88
CACNA1C-204ENST00000347598 MRPL27Q9P0M9 148 aaKnown RBP9.54□□□□□ -0.88
CACNA1C-204ENST00000347598 TMEM14EPQ6UXP3 125 aa9.53□□□□□ -0.88
CACNA1C-204ENST00000347598 LY96Q9Y6Y9 160 aa9.53□□□□□ -0.88
CACNA1C-204ENST00000347598 COL4A5P29400 1685 aa9.53□□□□□ -0.88
CACNA1C-204ENST00000347598 TMEM258P61165 79 aa9.53□□□□□ -0.88
CACNA1C-204ENST00000347598 THSD7AQ9UPZ6 1657 aa9.53□□□□□ -0.88
CACNA1C-204ENST00000347598 RS1O15537 224 aa9.53□□□□□ -0.88
CACNA1C-204ENST00000347598 GFI1Q99684 422 aa9.53□□□□□ -0.88
CACNA1C-204ENST00000347598 RALGAPA2Q2PPJ7 1873 aa9.53□□□□□ -0.88
CACNA1C-204ENST00000347598 BAALCQ8WXS3 180 aa9.53□□□□□ -0.88
CACNA1C-204ENST00000347598 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.53□□□□□ -0.88
CACNA1C-204ENST00000347598 CITED1Q99966 193 aa9.53□□□□□ -0.88
CACNA1C-204ENST00000347598 ABCA7Q8IZY2 2146 aa9.52□□□□□ -0.88
CACNA1C-204ENST00000347598 U3KQE9 123 aa9.52□□□□□ -0.88
CACNA1C-204ENST00000347598 FER1L5A0AVI2 2057 aa9.52□□□□□ -0.89
CACNA1C-204ENST00000347598 NYNRINQ9P2P1 1898 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms