RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 APOHP02749 345 aaPredicted RBP8.74□□□□□ -1.01
CLCN6-202ENST00000346436 MYCNOSP40205 109 aa8.74□□□□□ -1.01
CLCN6-202ENST00000346436 TMEM131Q92545 1883 aa8.74□□□□□ -1.01
CLCN6-202ENST00000346436 MUC22E2RYF6 1773 aaPredicted RBP8.74□□□□□ -1.01
CLCN6-202ENST00000346436 JPT2Q9H910 190 aa8.74□□□□□ -1.01
CLCN6-202ENST00000346436 OSTCQ9NRP0 149 aa8.74□□□□□ -1.01
CLCN6-202ENST00000346436 SELENOKQ9Y6D0 94 aa8.74□□□□□ -1.01
CLCN6-202ENST00000346436 PPBPP02775 128 aa8.74□□□□□ -1.01
CLCN6-202ENST00000346436 GP9P14770 177 aa8.74□□□□□ -1.01
CLCN6-202ENST00000346436 CST9LQ9H4G1 147 aa8.74□□□□□ -1.01
CLCN6-202ENST00000346436 XCL2Q9UBD3 114 aa8.74□□□□□ -1.01
CLCN6-202ENST00000346436 EPDR1Q9UM22 224 aa8.74□□□□□ -1.01
CLCN6-202ENST00000346436 IGHV4-30-2A0A087WSY4 118 aa8.73□□□□□ -1.01
CLCN6-202ENST00000346436 TRAV12-3A0A0B4J271 114 aa8.73□□□□□ -1.01
CLCN6-202ENST00000346436 ZNF134P52741 427 aa8.73□□□□□ -1.01
CLCN6-202ENST00000346436 MORN3Q6PF18 240 aaPredicted RBP8.73□□□□□ -1.01
CLCN6-202ENST00000346436 CRIP3Q6Q6R5 217 aa8.73□□□□□ -1.01
CLCN6-202ENST00000346436 TMEM136Q6ZRR5 245 aa8.73□□□□□ -1.01
CLCN6-202ENST00000346436 ZNF843Q8N446 348 aa8.73□□□□□ -1.01
CLCN6-202ENST00000346436 PARD6GQ9BYG4 376 aaPredicted RBP8.73□□□□□ -1.01
CLCN6-202ENST00000346436 EDA2RQ9HAV5 297 aa8.73□□□□□ -1.01
CLCN6-202ENST00000346436 NDUFA4O00483 81 aa8.73□□□□□ -1.01
CLCN6-202ENST00000346436 INSL3P51460 131 aa8.73□□□□□ -1.01
CLCN6-202ENST00000346436 ORMDL2Q53FV1 153 aa8.73□□□□□ -1.01
CLCN6-202ENST00000346436 PRSS57Q6UWY2 283 aa8.73□□□□□ -1.01
CLCN6-202ENST00000346436 HIST1H4GQ99525 98 aa8.73□□□□□ -1.01
CLCN6-202ENST00000346436 GNB1LQ9BYB4 327 aa8.73□□□□□ -1.01
CLCN6-202ENST00000346436 A0A1W2PRE2 83 aa8.73□□□□□ -1.01
CLCN6-202ENST00000346436 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.73□□□□□ -1.01
CLCN6-202ENST00000346436 Q6ZPA2 131 aa8.73□□□□□ -1.01
CLCN6-202ENST00000346436 WFDC12Q8WWY7 111 aa8.73□□□□□ -1.01
CLCN6-202ENST00000346436 TOMM40O96008 361 aa8.73□□□□□ -1.01
CLCN6-202ENST00000346436 FXYD7P58549 80 aa8.73□□□□□ -1.01
CLCN6-202ENST00000346436 ORMDL3Q8N138 153 aa8.73□□□□□ -1.01
CLCN6-202ENST00000346436 LAMTOR2Q9Y2Q5 125 aa8.73□□□□□ -1.01
CLCN6-202ENST00000346436 ADORA2A-AS1P86434 159 aa8.72□□□□□ -1.01
CLCN6-202ENST00000346436 EXOC3-AS1Q8N2X6 119 aa8.72□□□□□ -1.01
CLCN6-202ENST00000346436 ERCC8Q13216 396 aa8.72□□□□□ -1.01
CLCN6-202ENST00000346436 VWC2Q2TAL6 325 aa8.72□□□□□ -1.01
CLCN6-202ENST00000346436 RPL15P61313 204 aaKnown RBP8.72□□□□□ -1.01
CLCN6-202ENST00000346436 NDPQ00604 133 aa8.72□□□□□ -1.01
CLCN6-202ENST00000346436 FOXE3Q13461 319 aa8.72□□□□□ -1.01
CLCN6-202ENST00000346436 EML6Q6ZMW3 1958 aa8.72□□□□□ -1.01
CLCN6-202ENST00000346436 TRAV9-1A0A075B6T8 112 aa8.72□□□□□ -1.01
CLCN6-202ENST00000346436 TRAV8-1A0A0A6YYK1 113 aa8.72□□□□□ -1.01
CLCN6-202ENST00000346436 IGHV4-61A0A0C4DH41 118 aa8.72□□□□□ -1.01
CLCN6-202ENST00000346436 C7orf71A4D174 169 aa8.72□□□□□ -1.01
CLCN6-202ENST00000346436 C1orf194Q5T5A4 169 aa8.72□□□□□ -1.01
CLCN6-202ENST00000346436 RASL11AQ6T310 242 aa8.72□□□□□ -1.01
CLCN6-202ENST00000346436 POLR3KQ9Y2Y1 108 aaPredicted RBP8.72□□□□□ -1.01
CLCN6-202ENST00000346436 PTPRQQ9UMZ3 2332 aa8.72□□□□□ -1.01
CLCN6-202ENST00000346436 A8MWP6 167 aa8.71□□□□□ -1.01
CLCN6-202ENST00000346436 TNFRSF6BO95407 300 aa8.71□□□□□ -1.01
CLCN6-202ENST00000346436 IGHV4-39P01824 125 aa8.71□□□□□ -1.01
CLCN6-202ENST00000346436 NIT1Q86X76 327 aa8.71□□□□□ -1.01
CLCN6-202ENST00000346436 FAM208BQ5VWN6 2430 aa8.71□□□□□ -1.01
CLCN6-202ENST00000346436 IGLV1-44P01699 117 aa8.71□□□□□ -1.01
CLCN6-202ENST00000346436 IGHV4-59P01825 116 aa8.71□□□□□ -1.01
CLCN6-202ENST00000346436 TEX36Q5VZQ5 186 aa8.71□□□□□ -1.01
CLCN6-202ENST00000346436 KAAG1Q9UBP8 84 aa8.71□□□□□ -1.01
CLCN6-202ENST00000346436 WNK2Q9Y3S1 2297 aa8.71□□□□□ -1.02
CLCN6-202ENST00000346436 IGLV3-9A0A075B6K5 115 aa8.71□□□□□ -1.02
CLCN6-202ENST00000346436 LOXL1Q08397 574 aaPredicted RBP8.71□□□□□ -1.02
CLCN6-202ENST00000346436 ZNF124Q15973 351 aa8.71□□□□□ -1.02
CLCN6-202ENST00000346436 PRR14LQ5THK1 2151 aa8.71□□□□□ -1.02
CLCN6-202ENST00000346436 MED13LQ71F56 2210 aa8.71□□□□□ -1.02
CLCN6-202ENST00000346436 MMP23AO75900 390 aa8.71□□□□□ -1.02
CLCN6-202ENST00000346436 PSG3Q16557 428 aa8.71□□□□□ -1.02
CLCN6-202ENST00000346436 SPRNQ5BIV9 151 aa8.71□□□□□ -1.02
CLCN6-202ENST00000346436 PRO3102Q9H379 93 aa8.71□□□□□ -1.02
CLCN6-202ENST00000346436 C22orf46C9J442 243 aa8.7□□□□□ -1.02
CLCN6-202ENST00000346436 PCP4P48539 62 aa8.7□□□□□ -1.02
CLCN6-202ENST00000346436 RNF182Q8N6D2 247 aa8.7□□□□□ -1.02
CLCN6-202ENST00000346436 SCRT1Q9BWW7 348 aa8.7□□□□□ -1.02
CLCN6-202ENST00000346436 GAGE10A6NGK3 116 aa8.7□□□□□ -1.02
CLCN6-202ENST00000346436 LGALS1P09382 135 aaKnown RBP8.7□□□□□ -1.02
CLCN6-202ENST00000346436 SRSF1Q07955 248 aaKnown RBP eCLIP8.7□□□□□ -1.02
CLCN6-202ENST00000346436 SH2D6Q7Z4S9 175 aa8.7□□□□□ -1.02
CLCN6-202ENST00000346436 PIFOQ8TCI5 191 aa8.7□□□□□ -1.02
CLCN6-202ENST00000346436 SLC25A39Q9BZJ4 359 aaPredicted RBP8.7□□□□□ -1.02
CLCN6-202ENST00000346436 JKAMPQ9P055 326 aa8.7□□□□□ -1.02
CLCN6-202ENST00000346436 NUP210LQ5VU65 1888 aa8.7□□□□□ -1.02
CLCN6-202ENST00000346436 ADAMTS9Q9P2N4 1935 aa8.7□□□□□ -1.02
CLCN6-202ENST00000346436 SHISA9B4DS77 424 aa8.7□□□□□ -1.02
CLCN6-202ENST00000346436 CD5LO43866 347 aa8.7□□□□□ -1.02
CLCN6-202ENST00000346436 PPIFP30405 207 aaKnown RBP8.7□□□□□ -1.02
CLCN6-202ENST00000346436 C6orf226Q5I0X4 101 aa8.7□□□□□ -1.02
CLCN6-202ENST00000346436 LYPD1Q8N2G4 141 aa8.7□□□□□ -1.02
CLCN6-202ENST00000346436 NUP35Q8NFH5 326 aa8.7□□□□□ -1.02
CLCN6-202ENST00000346436 RASL10AQ92737 203 aa8.7□□□□□ -1.02
CLCN6-202ENST00000346436 C3orf79P0CE67 100 aa8.7□□□□□ -1.02
CLCN6-202ENST00000346436 LINC00158P58513 81 aa8.7□□□□□ -1.02
CLCN6-202ENST00000346436 ZNF876PQ49A33 203 aa8.7□□□□□ -1.02
CLCN6-202ENST00000346436 MKI67P46013 3256 aaKnown RBP8.69□□□□□ -1.02
CLCN6-202ENST00000346436 PTPRSQ13332 1948 aa8.69□□□□□ -1.02
CLCN6-202ENST00000346436 RNASE2P10153 161 aaKnown RBP8.69□□□□□ -1.02
CLCN6-202ENST00000346436 LINC00311Q8N616 119 aa8.69□□□□□ -1.02
CLCN6-202ENST00000346436 MED13Q9UHV7 2174 aa8.69□□□□□ -1.02
CLCN6-202ENST00000346436 LOC107984156A0A0G2JMH3 177 aa8.69□□□□□ -1.02
CLCN6-202ENST00000346436 SPART-AS1P0CW21 52 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms