RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 PRDM13Q9H4Q3 707 aa10.88□□□□□ -0.67
CDK5RAP1-202ENST00000346416 ZNF331Q9NQX6 463 aaPredicted RBP10.88□□□□□ -0.67
CDK5RAP1-202ENST00000346416 IGHV3-49A0A0A0MS15 119 aa10.88□□□□□ -0.67
CDK5RAP1-202ENST00000346416 NPIPB6E9PJ23 425 aa10.88□□□□□ -0.67
CDK5RAP1-202ENST00000346416 PF4V1P10720 104 aa10.88□□□□□ -0.67
CDK5RAP1-202ENST00000346416 TCF24Q7RTU0 167 aa10.88□□□□□ -0.67
CDK5RAP1-202ENST00000346416 GBGT1Q8N5D6 347 aa10.88□□□□□ -0.67
CDK5RAP1-202ENST00000346416 USMG5Q96IX5 58 aa10.88□□□□□ -0.67
CDK5RAP1-202ENST00000346416 SERTM2A0A1B0GWG4 89 aa10.87□□□□□ -0.67
CDK5RAP1-202ENST00000346416 TRBV12-3P01733 135 aa10.87□□□□□ -0.67
CDK5RAP1-202ENST00000346416 IGHG4P01861 327 aa10.87□□□□□ -0.67
CDK5RAP1-202ENST00000346416 HLA-DQA1P01909 254 aa10.87□□□□□ -0.67
CDK5RAP1-202ENST00000346416 CRISP2P16562 243 aa10.87□□□□□ -0.67
CDK5RAP1-202ENST00000346416 HLA-DMBP28068 263 aa10.87□□□□□ -0.67
CDK5RAP1-202ENST00000346416 C1orf194Q5T5A4 169 aa10.87□□□□□ -0.67
CDK5RAP1-202ENST00000346416 TMEM256Q8N2U0 113 aa10.87□□□□□ -0.67
CDK5RAP1-202ENST00000346416 GTSF1Q8WW33 167 aa10.87□□□□□ -0.67
CDK5RAP1-202ENST00000346416 IGKV2-40A0A087WW87 121 aaPredicted RBP10.87□□□□□ -0.67
CDK5RAP1-202ENST00000346416 A0A087X0K7 114 aa10.87□□□□□ -0.67
CDK5RAP1-202ENST00000346416 TSTD3H0UI37 97 aa10.87□□□□□ -0.67
CDK5RAP1-202ENST00000346416 CHEK1O14757 476 aa10.87□□□□□ -0.67
CDK5RAP1-202ENST00000346416 IGKV2D-40P01614 121 aaPredicted RBP10.87□□□□□ -0.67
CDK5RAP1-202ENST00000346416 IGLV1-40P01703 118 aa10.87□□□□□ -0.67
CDK5RAP1-202ENST00000346416 IGHV3-11P01762 117 aa10.87□□□□□ -0.67
CDK5RAP1-202ENST00000346416 GZMBP10144 247 aa10.87□□□□□ -0.67
CDK5RAP1-202ENST00000346416 RASL11AQ6T310 242 aa10.87□□□□□ -0.67
CDK5RAP1-202ENST00000346416 ARL6IP6Q8N6S5 226 aa10.87□□□□□ -0.67
CDK5RAP1-202ENST00000346416 WIPF2Q8TF74 440 aaPredicted RBP10.87□□□□□ -0.67
CDK5RAP1-202ENST00000346416 Q96MF0 132 aa10.87□□□□□ -0.67
CDK5RAP1-202ENST00000346416 FSHBP01225 129 aa10.86□□□□□ -0.67
CDK5RAP1-202ENST00000346416 PKIAP61925 76 aa10.86□□□□□ -0.67
CDK5RAP1-202ENST00000346416 KIAA1644Q3SXP7 199 aa10.86□□□□□ -0.67
CDK5RAP1-202ENST00000346416 LCNL1Q6ZST4 164 aa10.86□□□□□ -0.67
CDK5RAP1-202ENST00000346416 U3KQE9 123 aa10.86□□□□□ -0.67
CDK5RAP1-202ENST00000346416 PRRC2AP48634 2157 aaKnown RBP10.85□□□□□ -0.67
CDK5RAP1-202ENST00000346416 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.85□□□□□ -0.67
CDK5RAP1-202ENST00000346416 ZNF705FA8MVS1 300 aaPredicted RBP10.85□□□□□ -0.67
CDK5RAP1-202ENST00000346416 CFHR3Q02985 330 aa10.85□□□□□ -0.67
CDK5RAP1-202ENST00000346416 TMEM95Q3KNT9 176 aa10.85□□□□□ -0.67
CDK5RAP1-202ENST00000346416 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.85□□□□□ -0.67
CDK5RAP1-202ENST00000346416 OR4B1Q8NGF8 309 aa10.85□□□□□ -0.67
CDK5RAP1-202ENST00000346416 OR2D3Q8NGH3 330 aa10.85□□□□□ -0.67
CDK5RAP1-202ENST00000346416 C8orf49Q96NF6 230 aa10.85□□□□□ -0.67
CDK5RAP1-202ENST00000346416 GFRA4Q9GZZ7 299 aa10.85□□□□□ -0.67
CDK5RAP1-202ENST00000346416 NUPR1O60356 82 aa10.85□□□□□ -0.67
CDK5RAP1-202ENST00000346416 CRIP1P50238 77 aa10.85□□□□□ -0.67
CDK5RAP1-202ENST00000346416 GDF5OSQ5U4N7 250 aa10.85□□□□□ -0.67
CDK5RAP1-202ENST00000346416 LCN12Q6JVE5 192 aa10.85□□□□□ -0.67
CDK5RAP1-202ENST00000346416 C16orf54Q6UWD8 224 aa10.85□□□□□ -0.67
CDK5RAP1-202ENST00000346416 ATP5L2Q7Z4Y8 100 aa10.85□□□□□ -0.67
CDK5RAP1-202ENST00000346416 TP53TG3Q9ULZ0 132 aa10.85□□□□□ -0.67
CDK5RAP1-202ENST00000346416 HELZ2Q9BYK8 2649 aaKnown RBP10.84□□□□□ -0.67
CDK5RAP1-202ENST00000346416 ZNF469Q96JG9 3925 aaPredicted RBP10.84□□□□□ -0.67
CDK5RAP1-202ENST00000346416 APCSP02743 223 aa10.84□□□□□ -0.67
CDK5RAP1-202ENST00000346416 CAMPP49913 170 aa10.84□□□□□ -0.67
CDK5RAP1-202ENST00000346416 SLAQ13239 276 aa10.84□□□□□ -0.67
CDK5RAP1-202ENST00000346416 UNQ9165/PRO28630Q6UXU0 137 aa10.84□□□□□ -0.67
CDK5RAP1-202ENST00000346416 KRTAP1-3Q8IUG1 177 aa10.84□□□□□ -0.67
CDK5RAP1-202ENST00000346416 OR4X2Q8NGF9 303 aa10.84□□□□□ -0.67
CDK5RAP1-202ENST00000346416 PGLYRP4Q96LB8 373 aa10.84□□□□□ -0.67
CDK5RAP1-202ENST00000346416 TLN2Q9Y4G6 2542 aa10.84□□□□□ -0.67
CDK5RAP1-202ENST00000346416 ITPR3Q14573 2671 aa10.84□□□□□ -0.67
CDK5RAP1-202ENST00000346416 A0A0G2JLM5 398 aa10.84□□□□□ -0.67
CDK5RAP1-202ENST00000346416 A0A1B0GXF2 115 aa10.84□□□□□ -0.67
CDK5RAP1-202ENST00000346416 FAM231BA6NCW3 169 aa10.84□□□□□ -0.67
CDK5RAP1-202ENST00000346416 NDUFA4O00483 81 aa10.84□□□□□ -0.67
CDK5RAP1-202ENST00000346416 CT45A10P0DMU9 189 aa10.84□□□□□ -0.67
CDK5RAP1-202ENST00000346416 RBPMS2Q6ZRY4 209 aaKnown RBP10.84□□□□□ -0.67
CDK5RAP1-202ENST00000346416 RNF182Q8N6D2 247 aa10.84□□□□□ -0.67
CDK5RAP1-202ENST00000346416 VGLL1Q99990 258 aa10.84□□□□□ -0.67
CDK5RAP1-202ENST00000346416 SLC50A1Q9BRV3 221 aa10.84□□□□□ -0.67
CDK5RAP1-202ENST00000346416 ZNF580Q9UK33 172 aa10.84□□□□□ -0.67
CDK5RAP1-202ENST00000346416 CCDC168Q8NDH2 2452 aa10.83□□□□□ -0.68
CDK5RAP1-202ENST00000346416 DEFA6Q01524 100 aa10.83□□□□□ -0.68
CDK5RAP1-202ENST00000346416 Q0VG73 95 aa10.83□□□□□ -0.68
CDK5RAP1-202ENST00000346416 PRSS57Q6UWY2 283 aa10.83□□□□□ -0.68
CDK5RAP1-202ENST00000346416 C9orf139Q6ZV77 190 aa10.83□□□□□ -0.68
CDK5RAP1-202ENST00000346416 FBLL1A6NHQ2 334 aaKnown RBP10.82□□□□□ -0.68
CDK5RAP1-202ENST00000346416 F2Z2F3 143 aa10.82□□□□□ -0.68
CDK5RAP1-202ENST00000346416 LINC00310P59036 64 aa10.82□□□□□ -0.68
CDK5RAP1-202ENST00000346416 IQCJQ1A5X6 159 aa10.82□□□□□ -0.68
CDK5RAP1-202ENST00000346416 SAPCD1Q5SSQ6 148 aa10.82□□□□□ -0.68
CDK5RAP1-202ENST00000346416 HIST2H2BCQ6DN03 193 aa10.82□□□□□ -0.68
CDK5RAP1-202ENST00000346416 Q6YL49 198 aa10.82□□□□□ -0.68
CDK5RAP1-202ENST00000346416 BAGE3Q86Y29 109 aa10.82□□□□□ -0.68
CDK5RAP1-202ENST00000346416 Q8TAT8 98 aa10.82□□□□□ -0.68
CDK5RAP1-202ENST00000346416 PRR25Q96S07 402 aa10.82□□□□□ -0.68
CDK5RAP1-202ENST00000346416 VPREB3Q9UKI3 123 aa10.82□□□□□ -0.68
CDK5RAP1-202ENST00000346416 PRAC2D3DTV9 90 aa10.82□□□□□ -0.68
CDK5RAP1-202ENST00000346416 SERF1AO75920 110 aa10.82□□□□□ -0.68
CDK5RAP1-202ENST00000346416 PLA2G2AP14555 144 aa10.82□□□□□ -0.68
CDK5RAP1-202ENST00000346416 SRIP30626 198 aa10.82□□□□□ -0.68
CDK5RAP1-202ENST00000346416 PAFAH1B2P68402 229 aa10.82□□□□□ -0.68
CDK5RAP1-202ENST00000346416 HBBP68871 147 aa10.82□□□□□ -0.68
CDK5RAP1-202ENST00000346416 SSBP4Q9BWG4 385 aaPredicted RBP10.82□□□□□ -0.68
CDK5RAP1-202ENST00000346416 ESDP10768 282 aa10.81□□□□□ -0.68
CDK5RAP1-202ENST00000346416 FAM209BQ5JX69 171 aa10.81□□□□□ -0.68
CDK5RAP1-202ENST00000346416 CYB5R2Q6BCY4 276 aa10.81□□□□□ -0.68
CDK5RAP1-202ENST00000346416 C8orf86Q6ZUL3 223 aa10.81□□□□□ -0.68
CDK5RAP1-202ENST00000346416 COX8CQ7Z4L0 72 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms