RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 RAB37Q96AX2 223 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 CHCHD1Q96BP2 118 aaKnown RBP5.76□□□□□ -1.49
ZNF540-202ENST00000343599 RNF5Q99942 180 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 PRSS22Q9GZN4 317 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 LSM4Q9Y4Z0 139 aaKnown RBP5.76□□□□□ -1.49
ZNF540-202ENST00000343599 LRBAP50851 2863 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 TRGV10A0A0A0MS01 117 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 IGKV1-9A0A0C4DH69 117 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 TMEM213A2RRL7 107 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 NXPH3O95157 252 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 PPYP01298 95 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 OR5AL1P0C617 328 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 ZFP36P26651 326 aaKnown RBP5.76□□□□□ -1.49
ZNF540-202ENST00000343599 KIR2DS1Q14954 304 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 ZFAND6Q6FIF0 208 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 OSR1Q8TAX0 266 aaPredicted RBP5.76□□□□□ -1.49
ZNF540-202ENST00000343599 ARPC1AQ92747 370 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 SPTSSAQ969W0 71 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 C18orf15Q96N68 181 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 OSTCQ9NRP0 149 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 SMG1Q96Q15 3661 aaKnown RBP5.76□□□□□ -1.49
ZNF540-202ENST00000343599 IZUMO1RA6ND01 250 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 ZNF503-AS2A6NEH8 195 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 SYNGR2O43760 224 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 CT45A10P0DMU9 189 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 SLC38A11Q08AI6 406 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 FOXI1Q12951 378 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 SYT8Q8NBV8 401 aa5.76□□□□□ -1.49
ZNF540-202ENST00000343599 PHLDA1Q8WV24 401 aaPredicted RBP5.76□□□□□ -1.49
ZNF540-202ENST00000343599 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.75□□□□□ -1.49
ZNF540-202ENST00000343599 IGHV1-24A0A0C4DH33 117 aa5.75□□□□□ -1.49
ZNF540-202ENST00000343599 SCO2A0A1W2PP80 73 aa5.75□□□□□ -1.49
ZNF540-202ENST00000343599 E9PLD3 99 aa5.75□□□□□ -1.49
ZNF540-202ENST00000343599 C11orf98E9PRG8 122 aa5.75□□□□□ -1.49
ZNF540-202ENST00000343599 KISS1Q15726 138 aa5.75□□□□□ -1.49
ZNF540-202ENST00000343599 ZNF799Q96GE5 643 aa5.75□□□□□ -1.49
ZNF540-202ENST00000343599 TCF19Q9Y242 345 aa5.75□□□□□ -1.49
ZNF540-202ENST00000343599 PRRC2CQ9Y520 2896 aaKnown RBP5.75□□□□□ -1.49
ZNF540-202ENST00000343599 A0A0G2JRQ6 117 aa5.75□□□□□ -1.49
ZNF540-202ENST00000343599 FAM90A26D6RGX4 464 aa5.75□□□□□ -1.49
ZNF540-202ENST00000343599 CCDC179H3BU77 68 aa5.75□□□□□ -1.49
ZNF540-202ENST00000343599 PRDX2P32119 198 aa5.75□□□□□ -1.49
ZNF540-202ENST00000343599 NNATQ16517 81 aa5.75□□□□□ -1.49
ZNF540-202ENST00000343599 TMEM14EPQ6UXP3 125 aa5.75□□□□□ -1.49
ZNF540-202ENST00000343599 Q6ZPA2 131 aa5.75□□□□□ -1.49
ZNF540-202ENST00000343599 STPG3Q8N7X2 389 aa5.75□□□□□ -1.49
ZNF540-202ENST00000343599 MAP1LC3CQ9BXW4 147 aa5.75□□□□□ -1.49
ZNF540-202ENST00000343599 ZNF702PQ9H963 129 aa5.75□□□□□ -1.49
ZNF540-202ENST00000343599 COA3Q9Y2R0 106 aaPredicted RBP5.75□□□□□ -1.49
ZNF540-202ENST00000343599 WDFY3Q8IZQ1 3526 aa5.75□□□□□ -1.49
ZNF540-202ENST00000343599 MPDZO75970 2070 aa5.75□□□□□ -1.49
ZNF540-202ENST00000343599 RHODO00212 210 aa5.74□□□□□ -1.49
ZNF540-202ENST00000343599 LEPROTL1O95214 131 aa5.74□□□□□ -1.49
ZNF540-202ENST00000343599 ELANEP08246 267 aa5.74□□□□□ -1.49
ZNF540-202ENST00000343599 ZNF823P16415 610 aa5.74□□□□□ -1.49
ZNF540-202ENST00000343599 DIAPH2-AS1Q14236 149 aa5.74□□□□□ -1.49
ZNF540-202ENST00000343599 C9orf66Q5T8R8 295 aa5.74□□□□□ -1.49
ZNF540-202ENST00000343599 LINC00173Q6ZV60 143 aa5.74□□□□□ -1.49
ZNF540-202ENST00000343599 SLC25A33Q9BSK2 321 aa5.74□□□□□ -1.49
ZNF540-202ENST00000343599 TMEM126AQ9H061 195 aa5.74□□□□□ -1.49
ZNF540-202ENST00000343599 X6R8D5 127 aa5.74□□□□□ -1.49
ZNF540-202ENST00000343599 TMEM78Q5T7P6 136 aa5.74□□□□□ -1.49
ZNF540-202ENST00000343599 Q6ZR03 302 aa5.74□□□□□ -1.49
ZNF540-202ENST00000343599 TMEM147Q9BVK8 224 aa5.74□□□□□ -1.49
ZNF540-202ENST00000343599 AMMECR1Q9Y4X0 333 aaPredicted RBP5.74□□□□□ -1.49
ZNF540-202ENST00000343599 A0A1W2PRE2 83 aa5.73□□□□□ -1.49
ZNF540-202ENST00000343599 CXorf1O96002 111 aa5.73□□□□□ -1.49
ZNF540-202ENST00000343599 NDUFV3P56181 108 aaKnown RBP5.73□□□□□ -1.49
ZNF540-202ENST00000343599 ZNF121P58317 390 aaPredicted RBP5.73□□□□□ -1.49
ZNF540-202ENST00000343599 ZNF816Q0VGE8 651 aaPredicted RBP5.73□□□□□ -1.49
ZNF540-202ENST00000343599 DEFB112Q30KQ8 113 aa5.73□□□□□ -1.49
ZNF540-202ENST00000343599 GAGE13Q4V321 117 aa5.73□□□□□ -1.49
ZNF540-202ENST00000343599 HCP5Q6MZN7 132 aa5.73□□□□□ -1.49
ZNF540-202ENST00000343599 ZNF818PQ6ZRF7 136 aa5.73□□□□□ -1.49
ZNF540-202ENST00000343599 Q8N1Y9 231 aa5.73□□□□□ -1.49
ZNF540-202ENST00000343599 OR5AN1Q8NGI8 311 aa5.73□□□□□ -1.49
ZNF540-202ENST00000343599 NPCDR1Q9BY65 106 aa5.73□□□□□ -1.49
ZNF540-202ENST00000343599 ZNF816-ZNF321PA0A0X1KG74 233 aa5.73□□□□□ -1.49
ZNF540-202ENST00000343599 SPINK4O60575 86 aa5.73□□□□□ -1.49
ZNF540-202ENST00000343599 SEC61GP60059 68 aa5.73□□□□□ -1.49
ZNF540-202ENST00000343599 KRTAP10-3P60369 221 aa5.73□□□□□ -1.49
ZNF540-202ENST00000343599 SPENQ96T58 3664 aaKnown RBP5.73□□□□□ -1.49
ZNF540-202ENST00000343599 SMIM9A6NGZ8 99 aa5.73□□□□□ -1.49
ZNF540-202ENST00000343599 APOMO95445 188 aa5.73□□□□□ -1.49
ZNF540-202ENST00000343599 IAPPP10997 89 aa5.73□□□□□ -1.49
ZNF540-202ENST00000343599 FOXG1P55316 489 aaPredicted RBP5.73□□□□□ -1.49
ZNF540-202ENST00000343599 RPL8P62917 257 aaKnown RBP5.73□□□□□ -1.49
ZNF540-202ENST00000343599 GDF5OSQ5U4N7 250 aa5.73□□□□□ -1.49
ZNF540-202ENST00000343599 GAPTQ8N292 157 aa5.73□□□□□ -1.49
ZNF540-202ENST00000343599 ZNF331Q9NQX6 463 aaPredicted RBP5.73□□□□□ -1.49
ZNF540-202ENST00000343599 OPRK1P41145 380 aa5.72□□□□□ -1.49
ZNF540-202ENST00000343599 Q6ZRM9 215 aa5.72□□□□□ -1.49
ZNF540-202ENST00000343599 DNAJC30Q96LL9 226 aa5.72□□□□□ -1.49
ZNF540-202ENST00000343599 RTL8AQ9BWD3 113 aa5.72□□□□□ -1.49
ZNF540-202ENST00000343599 TP53TG1Q9Y2A0 90 aa5.72□□□□□ -1.49
ZNF540-202ENST00000343599 CELSR3Q9NYQ7 3312 aa5.72□□□□□ -1.49
ZNF540-202ENST00000343599 IGHV3-15A0A0B4J1V0 119 aa5.72□□□□□ -1.49
ZNF540-202ENST00000343599 FNDC10F2Z333 226 aa5.72□□□□□ -1.49
ZNF540-202ENST00000343599 LY6LH3BQJ8 138 aa5.72□□□□□ -1.49
ZNF540-202ENST00000343599 FCGR3BO75015 233 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms