RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 ACOT6Q3I5F7 207 aaPredicted RBP13.01□□□□□ -0.33
USF2-202ENST00000343550 ZNF705AQ6ZN79 300 aaPredicted RBP13.01□□□□□ -0.33
USF2-202ENST00000343550 RNF141Q8WVD5 230 aa13.01□□□□□ -0.33
USF2-202ENST00000343550 ZNF503Q96F45 646 aa13.01□□□□□ -0.33
USF2-202ENST00000343550 PAXXQ9BUH6 204 aa13.01□□□□□ -0.33
USF2-202ENST00000343550 C11orf68Q9H3H3 251 aaKnown RBP13.01□□□□□ -0.33
USF2-202ENST00000343550 OR10J4P0C629 311 aa13□□□□□ -0.33
USF2-202ENST00000343550 RBMY1A1P0DJD3 496 aaKnown RBP13□□□□□ -0.33
USF2-202ENST00000343550 RBMY1CP0DJD4 496 aa13□□□□□ -0.33
USF2-202ENST00000343550 ATP6V0CP27449 155 aa13□□□□□ -0.33
USF2-202ENST00000343550 RBMY1FQ15415 496 aaKnown RBP13□□□□□ -0.33
USF2-202ENST00000343550 C11orf45Q8TAV5 145 aa13□□□□□ -0.33
USF2-202ENST00000343550 FXYD5Q96DB9 178 aa13□□□□□ -0.33
USF2-202ENST00000343550 PSMG3Q9BT73 122 aaPredicted RBP13□□□□□ -0.33
USF2-202ENST00000343550 IGHV4-28A0A0C4DH34 117 aa12.99□□□□□ -0.33
USF2-202ENST00000343550 ARPC5O15511 151 aa12.99□□□□□ -0.33
USF2-202ENST00000343550 RPL7L1Q6DKI1 246 aaKnown RBP12.99□□□□□ -0.33
USF2-202ENST00000343550 C1orf158Q8N1D5 194 aa12.99□□□□□ -0.33
USF2-202ENST00000343550 OR2G3Q8NGZ4 309 aa12.99□□□□□ -0.33
USF2-202ENST00000343550 M0R2Z0 102 aa12.98□□□□□ -0.33
USF2-202ENST00000343550 CRXO43186 299 aaPredicted RBP12.98□□□□□ -0.33
USF2-202ENST00000343550 OR7C2O60412 319 aa12.98□□□□□ -0.33
USF2-202ENST00000343550 TAS2R45P59539 299 aa12.98□□□□□ -0.33
USF2-202ENST00000343550 NANOS2P60321 138 aaKnown RBP12.98□□□□□ -0.33
USF2-202ENST00000343550 RAB2AP61019 212 aa12.98□□□□□ -0.33
USF2-202ENST00000343550 SERF2P84101 59 aa12.98□□□□□ -0.33
USF2-202ENST00000343550 SPINK13Q1W4C9 94 aa12.98□□□□□ -0.33
USF2-202ENST00000343550 EXOC3-AS1Q8N2X6 119 aa12.98□□□□□ -0.33
USF2-202ENST00000343550 RPP25LQ8N5L8 163 aaKnown RBP12.98□□□□□ -0.33
USF2-202ENST00000343550 OR10G4Q8NGN3 311 aa12.98□□□□□ -0.33
USF2-202ENST00000343550 OR10G9Q8NGN4 311 aa12.98□□□□□ -0.33
USF2-202ENST00000343550 OR10G7Q8NGN6 311 aa12.98□□□□□ -0.33
USF2-202ENST00000343550 IGF2BP2-AS1Q96M15 143 aa12.98□□□□□ -0.33
USF2-202ENST00000343550 NEU1Q99519 415 aa12.98□□□□□ -0.33
USF2-202ENST00000343550 KMT2AQ03164 3969 aa12.98□□□□□ -0.33
USF2-202ENST00000343550 BORCS7-ASMTA0A0B4J1R7 106 aa12.98□□□□□ -0.33
USF2-202ENST00000343550 A0A1W2PPV4 95 aa12.98□□□□□ -0.33
USF2-202ENST00000343550 M0R3E3 92 aa12.98□□□□□ -0.33
USF2-202ENST00000343550 EIF3GO75821 320 aaKnown RBP eCLIP12.98□□□□□ -0.33
USF2-202ENST00000343550 AMBPP02760 352 aa12.98□□□□□ -0.33
USF2-202ENST00000343550 KHDC3LQ587J8 217 aa12.98□□□□□ -0.33
USF2-202ENST00000343550 LGALS9CQ6DKI2 356 aa12.98□□□□□ -0.33
USF2-202ENST00000343550 OR10J6PQ8NGY7 276 aa12.98□□□□□ -0.33
USF2-202ENST00000343550 MRPL53Q96EL3 112 aaKnown RBP12.98□□□□□ -0.33
USF2-202ENST00000343550 PPP1R14DQ9NXH3 145 aa12.98□□□□□ -0.33
USF2-202ENST00000343550 PRELID1Q9Y255 219 aa12.98□□□□□ -0.33
USF2-202ENST00000343550 IGHV3OR16-12A0A075B7B8 117 aa12.97□□□□□ -0.33
USF2-202ENST00000343550 SMIM9A6NGZ8 99 aa12.97□□□□□ -0.33
USF2-202ENST00000343550 TAAR5O14804 337 aa12.97□□□□□ -0.33
USF2-202ENST00000343550 ICAM4Q14773 271 aa12.97□□□□□ -0.33
USF2-202ENST00000343550 Q6ZNX1 250 aa12.97□□□□□ -0.33
USF2-202ENST00000343550 OR11H4Q8NGC9 324 aa12.97□□□□□ -0.33
USF2-202ENST00000343550 SH3BGRL3Q9H299 93 aa12.97□□□□□ -0.33
USF2-202ENST00000343550 AAMDCQ9H7C9 122 aa12.97□□□□□ -0.33
USF2-202ENST00000343550 HMSDA8MTL9 139 aa12.96□□□□□ -0.33
USF2-202ENST00000343550 BOLA2-SMG1P6H3BVE0 249 aa12.96□□□□□ -0.33
USF2-202ENST00000343550 FAM122CQ6P4D5 195 aa12.96□□□□□ -0.33
USF2-202ENST00000343550 GNPNAT1Q96EK6 184 aaPredicted RBP12.96□□□□□ -0.33
USF2-202ENST00000343550 CYTL1Q9NRR1 136 aa12.96□□□□□ -0.33
USF2-202ENST00000343550 GOLT1BQ9Y3E0 138 aa12.96□□□□□ -0.33
USF2-202ENST00000343550 FRAS1Q86XX4 4008 aa12.95□□□□□ -0.34
USF2-202ENST00000343550 TRAV12-2A0A075B6T6 113 aa12.95□□□□□ -0.34
USF2-202ENST00000343550 RANP62826 216 aaKnown RBP12.95□□□□□ -0.34
USF2-202ENST00000343550 PHYHIPLQ96FC7 376 aa12.95□□□□□ -0.34
USF2-202ENST00000343550 NPIPB6E9PJ23 425 aa12.94□□□□□ -0.34
USF2-202ENST00000343550 MBP02144 154 aa12.94□□□□□ -0.34
USF2-202ENST00000343550 CT45A10P0DMU9 189 aa12.94□□□□□ -0.34
USF2-202ENST00000343550 UBE2L3P68036 154 aaKnown RBP12.94□□□□□ -0.34
USF2-202ENST00000343550 PQLC2Q6ZP29 291 aa12.94□□□□□ -0.34
USF2-202ENST00000343550 BAP18Q8IXM2 172 aa12.94□□□□□ -0.34
USF2-202ENST00000343550 LYPD1Q8N2G4 141 aa12.94□□□□□ -0.34
USF2-202ENST00000343550 HMGB3O15347 200 aaKnown RBP12.93□□□□□ -0.34
USF2-202ENST00000343550 CDKN1BP46527 198 aa12.93□□□□□ -0.34
USF2-202ENST00000343550 KCNRGQ8N5I3 272 aa12.93□□□□□ -0.34
USF2-202ENST00000343550 RAB24Q969Q5 203 aa12.93□□□□□ -0.34
USF2-202ENST00000343550 INSP01308 110 aa12.93□□□□□ -0.34
USF2-202ENST00000343550 CDC34P49427 236 aaPredicted RBP12.93□□□□□ -0.34
USF2-202ENST00000343550 ERCC8Q13216 396 aa12.93□□□□□ -0.34
USF2-202ENST00000343550 ZNF345Q14585 488 aa12.93□□□□□ -0.34
USF2-202ENST00000343550 C2CD4CQ8TF44 421 aa12.93□□□□□ -0.34
USF2-202ENST00000343550 ST6GAL2Q96JF0 529 aa12.93□□□□□ -0.34
USF2-202ENST00000343550 TMEM208Q9BTX3 173 aa12.93□□□□□ -0.34
USF2-202ENST00000343550 STAG3L2P0CL84 134 aa12.92□□□□□ -0.34
USF2-202ENST00000343550 STAG3L3P0CL85 134 aa12.92□□□□□ -0.34
USF2-202ENST00000343550 KIR3DS1Q14943 382 aa12.92□□□□□ -0.34
USF2-202ENST00000343550 LINC00477Q96M19 166 aa12.92□□□□□ -0.34
USF2-202ENST00000343550 AGPAT4-IT1Q9H0P7 198 aa12.92□□□□□ -0.34
USF2-202ENST00000343550 Q9H3A6 140 aa12.92□□□□□ -0.34
USF2-202ENST00000343550 A0A0D9SG52 128 aa12.91□□□□□ -0.34
USF2-202ENST00000343550 HBE1P02100 147 aa12.91□□□□□ -0.34
USF2-202ENST00000343550 PRM2P04554 102 aa12.91□□□□□ -0.34
USF2-202ENST00000343550 TSPOP30536 169 aa12.91□□□□□ -0.34
USF2-202ENST00000343550 C9orf47Q6ZRZ4 202 aa12.91□□□□□ -0.34
USF2-202ENST00000343550 ODF3Q96PU9 254 aa12.91□□□□□ -0.34
USF2-202ENST00000343550 ARPC5LQ9BPX5 153 aa12.91□□□□□ -0.34
USF2-202ENST00000343550 ACTR3CQ9C0K3 210 aaPredicted RBP12.91□□□□□ -0.34
USF2-202ENST00000343550 TMEM189A5PLL7 270 aa12.9□□□□□ -0.34
USF2-202ENST00000343550 ARL14EPLP0DKL9 152 aa12.9□□□□□ -0.34
USF2-202ENST00000343550 TCTAP57738 103 aa12.9□□□□□ -0.34
USF2-202ENST00000343550 RRN3P1Q2M238 152 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms