RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 TAX1BP3O14907 124 aa3.84□□□□□ -1.79
CSMD3-203ENST00000343508 NEGR1Q7Z3B1 354 aa3.84□□□□□ -1.79
CSMD3-203ENST00000343508 UBE2WQ96B02 151 aa3.84□□□□□ -1.79
CSMD3-203ENST00000343508 ZC2HC1AQ96GY0 325 aa3.84□□□□□ -1.79
CSMD3-203ENST00000343508 IGHV3-35A0A0C4DH35 117 aa3.84□□□□□ -1.79
CSMD3-203ENST00000343508 PAX8Q06710 450 aa3.84□□□□□ -1.79
CSMD3-203ENST00000343508 IGHG3P01860 377 aa3.84□□□□□ -1.79
CSMD3-203ENST00000343508 TRGV3P03979 118 aa3.84□□□□□ -1.79
CSMD3-203ENST00000343508 SELENOKQ9Y6D0 94 aa3.84□□□□□ -1.79
CSMD3-203ENST00000343508 MED12Q93074 2177 aa3.84□□□□□ -1.79
CSMD3-203ENST00000343508 OOSP1A8MZH6 123 aa3.84□□□□□ -1.79
CSMD3-203ENST00000343508 F8VRH5 84 aa3.84□□□□□ -1.79
CSMD3-203ENST00000343508 CCL21O00585 134 aa3.84□□□□□ -1.79
CSMD3-203ENST00000343508 GHRHP01286 108 aa3.84□□□□□ -1.79
CSMD3-203ENST00000343508 PRTN3P24158 256 aa3.84□□□□□ -1.79
CSMD3-203ENST00000343508 WT1-ASQ06250 92 aa3.84□□□□□ -1.79
CSMD3-203ENST00000343508 ODF3L1Q8IXM7 274 aa3.84□□□□□ -1.79
CSMD3-203ENST00000343508 DYNLRB2Q8TF09 96 aa3.84□□□□□ -1.79
CSMD3-203ENST00000343508 TMEM141Q96I45 108 aa3.84□□□□□ -1.79
CSMD3-203ENST00000343508 SMKR1H3BMG3 65 aa3.84□□□□□ -1.79
CSMD3-203ENST00000343508 MINOS1Q5TGZ0 78 aa3.84□□□□□ -1.79
CSMD3-203ENST00000343508 C8orf31Q8N9H6 132 aa3.84□□□□□ -1.79
CSMD3-203ENST00000343508 C8orf49Q96NF6 230 aa3.84□□□□□ -1.79
CSMD3-203ENST00000343508 MINOS1-NBL1R4GNA1 71 aa3.84□□□□□ -1.79
CSMD3-203ENST00000343508 C9JAW5 83 aa3.84□□□□□ -1.79
CSMD3-203ENST00000343508 ETDBQ3ZM63 59 aa3.84□□□□□ -1.79
CSMD3-203ENST00000343508 C9orf139Q6ZV77 190 aa3.84□□□□□ -1.79
CSMD3-203ENST00000343508 LINC00311Q8N616 119 aa3.84□□□□□ -1.79
CSMD3-203ENST00000343508 PPDPFLQ8WWR9 84 aa3.84□□□□□ -1.79
CSMD3-203ENST00000343508 M0R1W7 72 aa3.84□□□□□ -1.8
CSMD3-203ENST00000343508 SLC25A16P16260 332 aa3.84□□□□□ -1.8
CSMD3-203ENST00000343508 CNTFRP26992 372 aa3.84□□□□□ -1.8
CSMD3-203ENST00000343508 HLA-DMBP28068 263 aa3.84□□□□□ -1.8
CSMD3-203ENST00000343508 CLEC2AQ6UVW9 174 aa3.84□□□□□ -1.8
CSMD3-203ENST00000343508 C2orf82Q6UX34 121 aa3.84□□□□□ -1.8
CSMD3-203ENST00000343508 SPATA12Q7Z6I5 190 aa3.84□□□□□ -1.8
CSMD3-203ENST00000343508 TMEM95Q3KNT9 176 aa3.84□□□□□ -1.8
CSMD3-203ENST00000343508 TEX48A0A1B0GUV7 120 aa3.84□□□□□ -1.8
CSMD3-203ENST00000343508 H3BRN7 92 aa3.84□□□□□ -1.8
CSMD3-203ENST00000343508 ZNF474Q6S9Z5 364 aaPredicted RBP3.84□□□□□ -1.8
CSMD3-203ENST00000343508 CTRLP40313 264 aa3.84□□□□□ -1.8
CSMD3-203ENST00000343508 ANKRD39Q53RE8 183 aa3.84□□□□□ -1.8
CSMD3-203ENST00000343508 TEX36Q5VZQ5 186 aa3.84□□□□□ -1.8
CSMD3-203ENST00000343508 Q6ZR03 302 aa3.84□□□□□ -1.8
CSMD3-203ENST00000343508 C15orf32Q32M92 178 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 PLEKHB2Q96CS7 222 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 IGLV1-44P01699 117 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 HLA-DRB4P13762 266 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 PRSS57Q6UWY2 283 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 OVOL2Q9BRP0 275 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 NPFFR1Q9GZQ6 430 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 HLA-DRB4X5D2U9 266 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 CEP350Q5VT06 3117 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 TMEM213A2RRL7 107 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 TRBV25-1A0A075B6N4 114 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 A0A087WX48 190 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 NDUFS7O75251 213 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 LHBP01229 141 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 C12orf74Q32Q52 190 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 RNASE6Q93091 150 aaKnown RBP3.83□□□□□ -1.8
CSMD3-203ENST00000343508 PRO1854Q9UHT4 67 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 MOB4Q9Y3A3 225 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 RBAKDNA6NC62 111 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 SDK2Q58EX2 2172 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 FAM223BA6NKX1 122 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 FAM223AQ8IWN6 122 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 HIGD1BQ9P298 99 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 DKK2Q9UBU2 259 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 SHANK1Q9Y566 2161 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 C2orf70A6NJV1 201 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 INS-IGF2F8WCM5 200 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 PRR31Q5SQ13 230 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 DTX2Q86UW9 622 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 Q8TCH9 128 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 MRPL35Q9NZE8 188 aaKnown RBP3.83□□□□□ -1.8
CSMD3-203ENST00000343508 MKI67P46013 3256 aaKnown RBP3.83□□□□□ -1.8
CSMD3-203ENST00000343508 PMVKQ15126 192 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 RAX2Q96IS3 184 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 C1QTNF4Q9BXJ3 329 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 CR1LQ2VPA4 569 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 C20orf78Q9BR46 151 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 PRDM6Q9NQX0 595 aa3.83□□□□□ -1.8
CSMD3-203ENST00000343508 SRRM4A7MD48 611 aaKnown RBP3.83□□□□□ -1.8
CSMD3-203ENST00000343508 SRSF2Q01130 221 aaKnown RBP3.83□□□□□ -1.8
CSMD3-203ENST00000343508 MORN3Q6PF18 240 aaPredicted RBP3.82□□□□□ -1.8
CSMD3-203ENST00000343508 Q6ZVH6 145 aa3.82□□□□□ -1.8
CSMD3-203ENST00000343508 ASXL3Q9C0F0 2248 aa3.82□□□□□ -1.8
CSMD3-203ENST00000343508 TANC2Q9HCD6 1990 aa3.82□□□□□ -1.8
CSMD3-203ENST00000343508 Q8TAT8 98 aa3.82□□□□□ -1.8
CSMD3-203ENST00000343508 CD28P10747 220 aa3.82□□□□□ -1.8
CSMD3-203ENST00000343508 PIMREGQ9BSJ6 248 aa3.82□□□□□ -1.8
CSMD3-203ENST00000343508 FGF23Q9GZV9 251 aaPredicted RBP3.82□□□□□ -1.8
CSMD3-203ENST00000343508 C5orf64Q2M2E5 130 aa3.82□□□□□ -1.8
CSMD3-203ENST00000343508 RTTNQ86VV8 2226 aa3.82□□□□□ -1.8
CSMD3-203ENST00000343508 IGHV3OR16-13A0A075B7E8 117 aa3.82□□□□□ -1.8
CSMD3-203ENST00000343508 IGHV3-74A0A0B4J1X5 117 aa3.82□□□□□ -1.8
CSMD3-203ENST00000343508 TRBV7-9A0A0J9YWB2 115 aa3.82□□□□□ -1.8
CSMD3-203ENST00000343508 UCNP55089 124 aa3.82□□□□□ -1.8
CSMD3-203ENST00000343508 RRN3P1Q2M238 152 aa3.82□□□□□ -1.8
CSMD3-203ENST00000343508 C2orf66Q6UXQ4 117 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms