RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 VDAC2P45880 294 aaPredicted RBP6.49□□□□□ -1.37
UBE4B-202ENST00000343090 LCNL1Q6ZST4 164 aa6.49□□□□□ -1.37
UBE4B-202ENST00000343090 TPSG1Q9NRR2 321 aa6.49□□□□□ -1.37
UBE4B-202ENST00000343090 IGLC1P0CG04 106 aa6.49□□□□□ -1.37
UBE4B-202ENST00000343090 FGF23Q9GZV9 251 aaPredicted RBP6.49□□□□□ -1.37
UBE4B-202ENST00000343090 DOPEY2Q9Y3R5 2298 aa6.49□□□□□ -1.37
UBE4B-202ENST00000343090 CACNA1BQ00975 2339 aa6.49□□□□□ -1.37
UBE4B-202ENST00000343090 SHANK1Q9Y566 2161 aa6.49□□□□□ -1.37
UBE4B-202ENST00000343090 IGHV3-73A0A0B4J1V6 119 aa6.49□□□□□ -1.37
UBE4B-202ENST00000343090 Q86TA4 180 aa6.49□□□□□ -1.37
UBE4B-202ENST00000343090 F8W1H4 67 aa6.49□□□□□ -1.37
UBE4B-202ENST00000343090 GGTLC3B5MD39 225 aa6.48□□□□□ -1.37
UBE4B-202ENST00000343090 C15orf65H3BRN8 121 aa6.48□□□□□ -1.37
UBE4B-202ENST00000343090 ARMS2P0C7Q2 107 aa6.48□□□□□ -1.37
UBE4B-202ENST00000343090 SLC25A2Q9BXI2 301 aa6.48□□□□□ -1.37
UBE4B-202ENST00000343090 K7ERJ3 54 aa6.48□□□□□ -1.37
UBE4B-202ENST00000343090 IFI27P40305 119 aaPredicted RBP6.48□□□□□ -1.37
UBE4B-202ENST00000343090 EFNA4P52798 201 aa6.48□□□□□ -1.37
UBE4B-202ENST00000343090 TRAV8-4A0A0B4J246 113 aa6.48□□□□□ -1.37
UBE4B-202ENST00000343090 A0A0U1RRA0 63 aa6.48□□□□□ -1.37
UBE4B-202ENST00000343090 H3BUX3 64 aa6.48□□□□□ -1.37
UBE4B-202ENST00000343090 GNLYP22749 145 aa6.48□□□□□ -1.37
UBE4B-202ENST00000343090 DLX4Q92988 240 aaPredicted RBP6.48□□□□□ -1.37
UBE4B-202ENST00000343090 NDUFA4L2Q9NRX3 87 aa6.48□□□□□ -1.37
UBE4B-202ENST00000343090 COL4A3Q01955 1670 aa6.48□□□□□ -1.37
UBE4B-202ENST00000343090 TRAV26-1A0A087WT03 109 aa6.48□□□□□ -1.37
UBE4B-202ENST00000343090 RNF182Q8N6D2 247 aa6.48□□□□□ -1.37
UBE4B-202ENST00000343090 C8orf49Q96NF6 230 aa6.48□□□□□ -1.37
UBE4B-202ENST00000343090 TMEM213A2RRL7 107 aa6.48□□□□□ -1.37
UBE4B-202ENST00000343090 FRMD6-AS1P0C7T7 363 aa6.48□□□□□ -1.37
UBE4B-202ENST00000343090 ZNF688P0C7X2 276 aa6.48□□□□□ -1.37
UBE4B-202ENST00000343090 LAGE3Q14657 143 aa6.48□□□□□ -1.37
UBE4B-202ENST00000343090 TRGV2A0A075B6R0 118 aa6.47□□□□□ -1.37
UBE4B-202ENST00000343090 TRAV2A0A0B4J234 112 aa6.47□□□□□ -1.37
UBE4B-202ENST00000343090 DPH3P1Q9H4G8 78 aa6.47□□□□□ -1.37
UBE4B-202ENST00000343090 KIF26AQ9ULI4 1882 aaPredicted RBP6.47□□□□□ -1.37
UBE4B-202ENST00000343090 SRRM4A7MD48 611 aaKnown RBP6.47□□□□□ -1.37
UBE4B-202ENST00000343090 H3BMG7 143 aa6.47□□□□□ -1.37
UBE4B-202ENST00000343090 IGHV4-39P01824 125 aa6.47□□□□□ -1.37
UBE4B-202ENST00000343090 WT1-ASQ06250 92 aa6.47□□□□□ -1.37
UBE4B-202ENST00000343090 SRSF8Q9BRL6 282 aaKnown RBP6.47□□□□□ -1.37
UBE4B-202ENST00000343090 BPESC1Q9GZL8 116 aa6.47□□□□□ -1.37
UBE4B-202ENST00000343090 PGPEP1Q9NXJ5 209 aa6.47□□□□□ -1.37
UBE4B-202ENST00000343090 MED13LQ71F56 2210 aa6.47□□□□□ -1.37
UBE4B-202ENST00000343090 TRAV12-3A0A0B4J271 114 aa6.47□□□□□ -1.37
UBE4B-202ENST00000343090 FCN3O75636 299 aa6.47□□□□□ -1.37
UBE4B-202ENST00000343090 CFHR2P36980 270 aa6.47□□□□□ -1.37
UBE4B-202ENST00000343090 CRYBA4P53673 196 aa6.47□□□□□ -1.37
UBE4B-202ENST00000343090 SSBP2P81877 361 aaPredicted RBP6.47□□□□□ -1.37
UBE4B-202ENST00000343090 ORMDL2Q53FV1 153 aa6.47□□□□□ -1.37
UBE4B-202ENST00000343090 CFAP161Q6P656 301 aa6.47□□□□□ -1.37
UBE4B-202ENST00000343090 C14orf178Q8N769 122 aaPredicted RBP6.47□□□□□ -1.37
UBE4B-202ENST00000343090 RNF5Q99942 180 aa6.47□□□□□ -1.37
UBE4B-202ENST00000343090 SHANK2-AS3Q9BTD1 123 aa6.47□□□□□ -1.37
UBE4B-202ENST00000343090 PRSS22Q9GZN4 317 aa6.47□□□□□ -1.37
UBE4B-202ENST00000343090 ABCA1O95477 2261 aa6.47□□□□□ -1.37
UBE4B-202ENST00000343090 OVOL1O14753 267 aa6.47□□□□□ -1.37
UBE4B-202ENST00000343090 SAA4P35542 130 aa6.47□□□□□ -1.37
UBE4B-202ENST00000343090 TMEM155Q4W5P6 130 aa6.47□□□□□ -1.37
UBE4B-202ENST00000343090 SPRNQ5BIV9 151 aa6.47□□□□□ -1.37
UBE4B-202ENST00000343090 FNDC10F2Z333 226 aa6.46□□□□□ -1.37
UBE4B-202ENST00000343090 RUSC1-AS1Q66K80 236 aa6.46□□□□□ -1.37
UBE4B-202ENST00000343090 LINC00173Q6ZV60 143 aa6.46□□□□□ -1.37
UBE4B-202ENST00000343090 TMEM158Q8WZ71 300 aa6.46□□□□□ -1.37
UBE4B-202ENST00000343090 MINOS1Q5TGZ0 78 aa6.46□□□□□ -1.38
UBE4B-202ENST00000343090 ZNF833PQ6ZTB9 187 aa6.46□□□□□ -1.38
UBE4B-202ENST00000343090 SCRT2Q9NQ03 307 aa6.46□□□□□ -1.38
UBE4B-202ENST00000343090 PEMTQ9UBM1 199 aa6.46□□□□□ -1.38
UBE4B-202ENST00000343090 MINOS1-NBL1R4GNA1 71 aa6.46□□□□□ -1.38
UBE4B-202ENST00000343090 B5MCH6 92 aa6.46□□□□□ -1.38
UBE4B-202ENST00000343090 M0R1W7 72 aa6.46□□□□□ -1.38
UBE4B-202ENST00000343090 CD28P10747 220 aa6.46□□□□□ -1.38
UBE4B-202ENST00000343090 HTN3P15516 51 aa6.46□□□□□ -1.38
UBE4B-202ENST00000343090 NPC2P61916 151 aa6.46□□□□□ -1.38
UBE4B-202ENST00000343090 AMTNQ6UX39 209 aa6.46□□□□□ -1.38
UBE4B-202ENST00000343090 IGFBPL1Q8WX77 278 aa6.46□□□□□ -1.38
UBE4B-202ENST00000343090 C11orf52Q96A22 123 aa6.46□□□□□ -1.38
UBE4B-202ENST00000343090 LOXP28300 417 aaPredicted RBP6.46□□□□□ -1.38
UBE4B-202ENST00000343090 ZC2HC1BQ5TFG8 222 aa6.46□□□□□ -1.38
UBE4B-202ENST00000343090 C1orf122Q6ZSJ8 110 aa6.46□□□□□ -1.38
UBE4B-202ENST00000343090 STHQ8IWL8 128 aa6.46□□□□□ -1.38
UBE4B-202ENST00000343090 VGLL1Q99990 258 aa6.46□□□□□ -1.38
UBE4B-202ENST00000343090 YAE1D1Q9NRH1 226 aa6.46□□□□□ -1.38
UBE4B-202ENST00000343090 TMEM8BA6NDV4 472 aa6.45□□□□□ -1.38
UBE4B-202ENST00000343090 PLA2G5P39877 138 aa6.45□□□□□ -1.38
UBE4B-202ENST00000343090 KLF5Q13887 457 aaPredicted RBP6.45□□□□□ -1.38
UBE4B-202ENST00000343090 C11orf1Q9H5F2 150 aa6.45□□□□□ -1.38
UBE4B-202ENST00000343090 FAM215AQ9Y5M1 114 aa6.45□□□□□ -1.38
UBE4B-202ENST00000343090 NUP210Q8TEM1 1887 aaPredicted RBP6.45□□□□□ -1.38
UBE4B-202ENST00000343090 GATA4P43694 442 aa6.45□□□□□ -1.38
UBE4B-202ENST00000343090 SH2D6Q7Z4S9 175 aa6.45□□□□□ -1.38
UBE4B-202ENST00000343090 RBMY1BA6NDE4 496 aaKnown RBP6.45□□□□□ -1.38
UBE4B-202ENST00000343090 RBMY1EA6NEQ0 496 aaKnown RBP6.45□□□□□ -1.38
UBE4B-202ENST00000343090 DKK1O94907 266 aa6.45□□□□□ -1.38
UBE4B-202ENST00000343090 IGLV1-44P01699 117 aa6.45□□□□□ -1.38
UBE4B-202ENST00000343090 RBMY1DP0C7P1 496 aaKnown RBP6.45□□□□□ -1.38
UBE4B-202ENST00000343090 RBMY1A1P0DJD3 496 aaKnown RBP6.45□□□□□ -1.38
UBE4B-202ENST00000343090 RBMY1CP0DJD4 496 aa6.45□□□□□ -1.38
UBE4B-202ENST00000343090 TMEM95Q3KNT9 176 aa6.45□□□□□ -1.38
UBE4B-202ENST00000343090 C3orf36Q3SXR2 165 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms