RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 DAZ1Q9NQZ3 744 aaKnown RBP14.49□□□□□ -0.09
SMAD4-201ENST00000342988 TRBV5-3A0A0A0MS03 114 aa14.49□□□□□ -0.09
SMAD4-201ENST00000342988 RNF5Q99942 180 aa14.49□□□□□ -0.09
SMAD4-201ENST00000342988 A8MWP6 167 aa14.49□□□□□ -0.09
SMAD4-201ENST00000342988 CD55P08174 381 aa14.49□□□□□ -0.09
SMAD4-201ENST00000342988 AZU1P20160 251 aa14.49□□□□□ -0.09
SMAD4-201ENST00000342988 LCNL1Q6ZST4 164 aa14.49□□□□□ -0.09
SMAD4-201ENST00000342988 NRXN3Q9Y4C0 1643 aa14.48□□□□□ -0.09
SMAD4-201ENST00000342988 SLC25A16P16260 332 aa14.48□□□□□ -0.09
SMAD4-201ENST00000342988 DEFB105AQ8NG35 78 aa14.48□□□□□ -0.09
SMAD4-201ENST00000342988 REPIN1Q9BWE0 567 aaKnown RBP14.48□□□□□ -0.09
SMAD4-201ENST00000342988 TINCRA0A1B0GVN0 87 aa14.48□□□□□ -0.09
SMAD4-201ENST00000342988 CELA2AP08217 269 aa14.48□□□□□ -0.09
SMAD4-201ENST00000342988 PIP4P2Q8N4L2 257 aa14.48□□□□□ -0.09
SMAD4-201ENST00000342988 FAM216BQ8N7L0 139 aa14.48□□□□□ -0.09
SMAD4-201ENST00000342988 ZNF106Q9H2Y7 1883 aaKnown RBP14.48□□□□□ -0.09
SMAD4-201ENST00000342988 A0A087WWL8 130 aa14.48□□□□□ -0.09
SMAD4-201ENST00000342988 CASC2Q6XLA1 102 aa14.48□□□□□ -0.09
SMAD4-201ENST00000342988 C20orf204Q6ZNR8 217 aa14.47□□□□□ -0.09
SMAD4-201ENST00000342988 SPANXB1Q9NS25 103 aaPredicted RBP14.47□□□□□ -0.09
SMAD4-201ENST00000342988 MPZP25189 248 aa14.47□□□□□ -0.09
SMAD4-201ENST00000342988 ETDBQ3ZM63 59 aa14.47□□□□□ -0.09
SMAD4-201ENST00000342988 K7EP13 123 aa14.47□□□□□ -0.09
SMAD4-201ENST00000342988 FXYD7P58549 80 aa14.47□□□□□ -0.09
SMAD4-201ENST00000342988 PLXNA4Q9HCM2 1894 aa14.47□□□□□ -0.09
SMAD4-201ENST00000342988 MRPS18CQ9Y3D5 142 aaKnown RBP14.47□□□□□ -0.09
SMAD4-201ENST00000342988 A0A1W2PPM0 123 aa14.47□□□□□ -0.09
SMAD4-201ENST00000342988 FAM231BA6NCW3 169 aa14.46□□□□□ -0.09
SMAD4-201ENST00000342988 C9JQL5 133 aa14.46□□□□□ -0.09
SMAD4-201ENST00000342988 KIAA1549LQ6ZVL6 1849 aa14.46□□□□□ -0.09
SMAD4-201ENST00000342988 A0A1B0GWJ7 208 aa14.46□□□□□ -0.09
SMAD4-201ENST00000342988 TIMM23O14925 209 aa14.46□□□□□ -0.09
SMAD4-201ENST00000342988 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.46□□□□□ -0.09
SMAD4-201ENST00000342988 NUP210LQ5VU65 1888 aa14.46□□□□□ -0.09
SMAD4-201ENST00000342988 KIAA1671Q9BY89 1806 aa14.46□□□□□ -0.1
SMAD4-201ENST00000342988 C19orf48Q6RUI8 117 aa14.46□□□□□ -0.1
SMAD4-201ENST00000342988 TMEM256Q8N2U0 113 aa14.46□□□□□ -0.1
SMAD4-201ENST00000342988 PSMB8P28062 276 aa14.45□□□□□ -0.1
SMAD4-201ENST00000342988 FNDC10F2Z333 226 aa14.45□□□□□ -0.1
SMAD4-201ENST00000342988 ETDCA0A1B0GVM5 59 aa14.45□□□□□ -0.1
SMAD4-201ENST00000342988 PSPNO60542 156 aa14.45□□□□□ -0.1
SMAD4-201ENST00000342988 C11orf44Q8N8P7 122 aa14.45□□□□□ -0.1
SMAD4-201ENST00000342988 VMO1Q7Z5L0 202 aa14.45□□□□□ -0.1
SMAD4-201ENST00000342988 VSIG2Q96IQ7 327 aa14.45□□□□□ -0.1
SMAD4-201ENST00000342988 PTPN13Q12923 2485 aa14.45□□□□□ -0.1
SMAD4-201ENST00000342988 CDCP2Q5VXM1 449 aa14.45□□□□□ -0.1
SMAD4-201ENST00000342988 SPTSSBQ8NFR3 76 aa14.45□□□□□ -0.1
SMAD4-201ENST00000342988 TEX22C9J3V5 150 aa14.45□□□□□ -0.1
SMAD4-201ENST00000342988 RPP25Q9BUL9 199 aaKnown RBP14.45□□□□□ -0.1
SMAD4-201ENST00000342988 PRB4P10163 310 aaPredicted RBP14.45□□□□□ -0.1
SMAD4-201ENST00000342988 PYY3Q5JQD4 70 aa14.44□□□□□ -0.1
SMAD4-201ENST00000342988 K7EP34 96 aa14.44□□□□□ -0.1
SMAD4-201ENST00000342988 PSG7Q13046 419 aa14.44□□□□□ -0.1
SMAD4-201ENST00000342988 M0R1W7 72 aa14.44□□□□□ -0.1
SMAD4-201ENST00000342988 CRYGCP07315 174 aa14.44□□□□□ -0.1
SMAD4-201ENST00000342988 FOXL2P58012 376 aa14.44□□□□□ -0.1
SMAD4-201ENST00000342988 HIGD2BQ4VC39 106 aa14.44□□□□□ -0.1
SMAD4-201ENST00000342988 ZNF503Q96F45 646 aa14.44□□□□□ -0.1
SMAD4-201ENST00000342988 IGHV2-26A0A0B4J1V2 119 aa14.44□□□□□ -0.1
SMAD4-201ENST00000342988 TFF2Q03403 129 aa14.44□□□□□ -0.1
SMAD4-201ENST00000342988 GLI3P10071 1580 aa14.44□□□□□ -0.1
SMAD4-201ENST00000342988 C15orf53Q8NAA6 179 aa14.44□□□□□ -0.1
SMAD4-201ENST00000342988 AMELYQ99218 206 aa14.44□□□□□ -0.1
SMAD4-201ENST00000342988 BMPERQ8N8U9 685 aa14.43□□□□□ -0.1
SMAD4-201ENST00000342988 KIR2DL5BA0A0G2JN68 375 aa14.43□□□□□ -0.1
SMAD4-201ENST00000342988 KIR2DL5BA0A0G2JPC4 375 aa14.43□□□□□ -0.1
SMAD4-201ENST00000342988 KIR2DL5AQ8N109 375 aa14.43□□□□□ -0.1
SMAD4-201ENST00000342988 ANGP03950 147 aaKnown RBP14.43□□□□□ -0.1
SMAD4-201ENST00000342988 IL9P15248 144 aa14.43□□□□□ -0.1
SMAD4-201ENST00000342988 LILRA6Q6PI73 481 aa14.43□□□□□ -0.1
SMAD4-201ENST00000342988 GREM1O60565 184 aa14.42□□□□□ -0.1
SMAD4-201ENST00000342988 C3orf79P0CE67 100 aa14.42□□□□□ -0.1
SMAD4-201ENST00000342988 MSRB2Q9Y3D2 182 aa14.42□□□□□ -0.1
SMAD4-201ENST00000342988 HERV-K104P63124 156 aa14.42□□□□□ -0.1
SMAD4-201ENST00000342988 SS18L2Q9UHA2 77 aa14.42□□□□□ -0.1
SMAD4-201ENST00000342988 K7EMI3 77 aa14.42□□□□□ -0.1
SMAD4-201ENST00000342988 NREPQ16612 68 aa14.42□□□□□ -0.1
SMAD4-201ENST00000342988 NDUFA12Q9UI09 145 aa14.42□□□□□ -0.1
SMAD4-201ENST00000342988 LINC01620Q4KN68 170 aa14.42□□□□□ -0.1
SMAD4-201ENST00000342988 BAALC-AS2P0C853 105 aa14.41□□□□□ -0.1
SMAD4-201ENST00000342988 Q5BKY6 102 aa14.41□□□□□ -0.1
SMAD4-201ENST00000342988 SIGLEC12Q96PQ1 595 aa14.41□□□□□ -0.1
SMAD4-201ENST00000342988 B4DSR2 109 aa14.41□□□□□ -0.1
SMAD4-201ENST00000342988 COL24A1Q17RW2 1714 aa14.41□□□□□ -0.1
SMAD4-201ENST00000342988 TREML4Q6UXN2 200 aa14.41□□□□□ -0.1
SMAD4-201ENST00000342988 MCRIP2Q9BUT9 160 aaKnown RBP14.41□□□□□ -0.1
SMAD4-201ENST00000342988 AHDC1Q5TGY3 1603 aaPredicted RBP14.41□□□□□ -0.1
SMAD4-201ENST00000342988 CENPVL1A0A0U1RR11 272 aa14.41□□□□□ -0.1
SMAD4-201ENST00000342988 HLA-DRB4P13762 266 aa14.4□□□□□ -0.1
SMAD4-201ENST00000342988 HLA-DRB4X5D2U9 266 aa14.4□□□□□ -0.1
SMAD4-201ENST00000342988 NDUFB8O95169 186 aa14.4□□□□□ -0.1
SMAD4-201ENST00000342988 RPL18AQ02543 176 aaKnown RBP14.4□□□□□ -0.1
SMAD4-201ENST00000342988 FAM27E3Q08E93 113 aa14.4□□□□□ -0.1
SMAD4-201ENST00000342988 SONP18583 2426 aaKnown RBP14.4□□□□□ -0.1
SMAD4-201ENST00000342988 PATE3B3GLJ2 98 aa14.4□□□□□ -0.1
SMAD4-201ENST00000342988 GATA3P23771 443 aa14.39□□□□□ -0.11
SMAD4-201ENST00000342988 GZMMP51124 257 aa14.39□□□□□ -0.11
SMAD4-201ENST00000342988 IGHV1-2P23083 117 aa14.39□□□□□ -0.11
SMAD4-201ENST00000342988 SELENOKQ9Y6D0 94 aa14.39□□□□□ -0.11
SMAD4-201ENST00000342988 ATP5G1P05496 136 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms