RNA–Protein interactions for RNA: ENST00000341040.11

LCN10-201, Transcript of lipocalin 10, humanhuman

TSL 1 (best)

Gene LCN10, Length 1,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN10-201ENST00000341040 ZNF738Q8NE65 137 aa11.16□□□□□ -0.62
LCN10-201ENST00000341040 CMTM2Q8TAZ6 248 aa11.16□□□□□ -0.62
LCN10-201ENST00000341040 MRPL53Q96EL3 112 aaKnown RBP11.16□□□□□ -0.62
LCN10-201ENST00000341040 C19orf73Q9NVV2 129 aa11.16□□□□□ -0.62
LCN10-201ENST00000341040 GNG13Q9P2W3 67 aa11.16□□□□□ -0.62
LCN10-201ENST00000341040 NMBP08949 121 aa11.16□□□□□ -0.62
LCN10-201ENST00000341040 TAGLN2P37802 199 aaKnown RBP11.16□□□□□ -0.62
LCN10-201ENST00000341040 DEFB1P60022 68 aa11.16□□□□□ -0.62
LCN10-201ENST00000341040 UBE2G2P60604 165 aa11.16□□□□□ -0.62
LCN10-201ENST00000341040 PMS2P11Q13670 270 aa11.16□□□□□ -0.62
LCN10-201ENST00000341040 RXFP4Q8TDU9 374 aa11.16□□□□□ -0.62
LCN10-201ENST00000341040 C20orf173Q96LM9 149 aa11.16□□□□□ -0.62
LCN10-201ENST00000341040 PGPA6NDG6 321 aa11.15□□□□□ -0.62
LCN10-201ENST00000341040 FAM74A7A6NL05 159 aa11.15□□□□□ -0.62
LCN10-201ENST00000341040 CCL20P78556 96 aa11.15□□□□□ -0.62
LCN10-201ENST00000341040 CST9LP1Q5W188 147 aa11.15□□□□□ -0.62
LCN10-201ENST00000341040 PAGE4O60829 102 aa11.14□□□□□ -0.63
LCN10-201ENST00000341040 SUMO1P63165 101 aaKnown RBP11.14□□□□□ -0.63
LCN10-201ENST00000341040 DEFB121Q5J5C9 76 aa11.14□□□□□ -0.63
LCN10-201ENST00000341040 ARL6IP6Q8N6S5 226 aa11.14□□□□□ -0.63
LCN10-201ENST00000341040 RPUSD4Q96CM3 377 aaKnown RBP11.14□□□□□ -0.63
LCN10-201ENST00000341040 CITED4Q96RK1 184 aa11.14□□□□□ -0.63
LCN10-201ENST00000341040 YTHDF2Q9Y5A9 579 aaKnown RBP11.14□□□□□ -0.63
LCN10-201ENST00000341040 GGTLC3B5MD39 225 aa11.13□□□□□ -0.63
LCN10-201ENST00000341040 M0R3E3 92 aa11.13□□□□□ -0.63
LCN10-201ENST00000341040 CLLU1Q5K131 121 aa11.13□□□□□ -0.63
LCN10-201ENST00000341040 EBLN2Q6P2I7 272 aa11.13□□□□□ -0.63
LCN10-201ENST00000341040 FOXI2Q6ZQN5 318 aa11.13□□□□□ -0.63
LCN10-201ENST00000341040 C5orf17Q8NAS9 161 aa11.13□□□□□ -0.63
LCN10-201ENST00000341040 PCNPQ8WW12 178 aaKnown RBP11.13□□□□□ -0.63
LCN10-201ENST00000341040 TXNDC17Q9BRA2 123 aa11.13□□□□□ -0.63
LCN10-201ENST00000341040 TCEAL7Q9BRU2 100 aa11.13□□□□□ -0.63
LCN10-201ENST00000341040 PRKDCP78527 4128 aaKnown RBP11.13□□□□□ -0.63
LCN10-201ENST00000341040 MEGF8Q7Z7M0 2845 aa11.13□□□□□ -0.63
LCN10-201ENST00000341040 SLC25A5P05141 298 aaKnown RBP11.13□□□□□ -0.63
LCN10-201ENST00000341040 MRAPQ8TCY5 172 aa11.13□□□□□ -0.63
LCN10-201ENST00000341040 SRD5A3Q9H8P0 318 aa11.13□□□□□ -0.63
LCN10-201ENST00000341040 KNCNA6PVL3 124 aa11.12□□□□□ -0.63
LCN10-201ENST00000341040 C11orf94C9JXX5 98 aa11.12□□□□□ -0.63
LCN10-201ENST00000341040 IGHV4-30-4P0DP06 118 aa11.12□□□□□ -0.63
LCN10-201ENST00000341040 BCL2P10415 239 aa11.12□□□□□ -0.63
LCN10-201ENST00000341040 SERTM2A0A1B0GWG4 89 aa11.11□□□□□ -0.63
LCN10-201ENST00000341040 ZNF705FA8MVS1 300 aaPredicted RBP11.11□□□□□ -0.63
LCN10-201ENST00000341040 F6UB75 175 aa11.11□□□□□ -0.63
LCN10-201ENST00000341040 F6UZH7 168 aa11.11□□□□□ -0.63
LCN10-201ENST00000341040 HAGHQ16775 308 aa11.11□□□□□ -0.63
LCN10-201ENST00000341040 OR10J6PQ8NGY7 276 aa11.11□□□□□ -0.63
LCN10-201ENST00000341040 SAV1Q9H4B6 383 aaPredicted RBP11.11□□□□□ -0.63
LCN10-201ENST00000341040 TUBA4BQ9H853 241 aa11.11□□□□□ -0.63
LCN10-201ENST00000341040 VAX2Q9UIW0 290 aa11.11□□□□□ -0.63
LCN10-201ENST00000341040 K7EQM0 130 aa11.11□□□□□ -0.63
LCN10-201ENST00000341040 MEF2BQ02080 365 aaPredicted RBP11.11□□□□□ -0.63
LCN10-201ENST00000341040 ACTL10Q5JWF8 245 aa11.11□□□□□ -0.63
LCN10-201ENST00000341040 STHQ8IWL8 128 aa11.11□□□□□ -0.63
LCN10-201ENST00000341040 OR8A1Q8NGG7 326 aa11.11□□□□□ -0.63
LCN10-201ENST00000341040 HIST1H2BAQ96A08 127 aa11.11□□□□□ -0.63
LCN10-201ENST00000341040 EPDR1Q9UM22 224 aa11.11□□□□□ -0.63
LCN10-201ENST00000341040 A0A0J9YX75 114 aa11.1□□□□□ -0.63
LCN10-201ENST00000341040 RBFOX3A6NFN3 312 aa11.1□□□□□ -0.63
LCN10-201ENST00000341040 DUSP14O95147 198 aaKnown RBP11.1□□□□□ -0.63
LCN10-201ENST00000341040 ZNF705DP0CH99 300 aaPredicted RBP11.1□□□□□ -0.63
LCN10-201ENST00000341040 ZNF705BP0CI00 300 aaPredicted RBP11.1□□□□□ -0.63
LCN10-201ENST00000341040 HLA-DRB4P13762 266 aa11.1□□□□□ -0.63
LCN10-201ENST00000341040 ATP5G3P48201 142 aa11.1□□□□□ -0.63
LCN10-201ENST00000341040 GDF5OSQ5U4N7 250 aa11.1□□□□□ -0.63
LCN10-201ENST00000341040 CCDC28AQ8IWP9 274 aa11.1□□□□□ -0.63
LCN10-201ENST00000341040 FAM210AQ96ND0 272 aa11.1□□□□□ -0.63
LCN10-201ENST00000341040 ATG101Q9BSB4 218 aa11.1□□□□□ -0.63
LCN10-201ENST00000341040 RPH3ALQ9UNE2 315 aa11.1□□□□□ -0.63
LCN10-201ENST00000341040 HLA-DRB4X5D2U9 266 aa11.1□□□□□ -0.63
LCN10-201ENST00000341040 DNAH9Q9NYC9 4486 aa11.1□□□□□ -0.63
LCN10-201ENST00000341040 RBAKDNA6NC62 111 aa11.09□□□□□ -0.63
LCN10-201ENST00000341040 DIRC3C9JPN6 131 aa11.09□□□□□ -0.63
LCN10-201ENST00000341040 RPL35AP18077 110 aaKnown RBP11.09□□□□□ -0.63
LCN10-201ENST00000341040 HIST1H1AQ02539 215 aaPredicted RBP11.09□□□□□ -0.63
LCN10-201ENST00000341040 EIF5A2Q9GZV4 153 aaKnown RBP11.09□□□□□ -0.63
LCN10-201ENST00000341040 LOC102723971A0A1B0GUV8 181 aa11.08□□□□□ -0.64
LCN10-201ENST00000341040 RBMY1BA6NDE4 496 aaKnown RBP11.08□□□□□ -0.64
LCN10-201ENST00000341040 RBMY1EA6NEQ0 496 aaKnown RBP11.08□□□□□ -0.64
LCN10-201ENST00000341040 PRAC2D3DTV9 90 aa11.08□□□□□ -0.64
LCN10-201ENST00000341040 PDE6DO43924 150 aa11.08□□□□□ -0.64
LCN10-201ENST00000341040 TCRAP04437 139 aa11.08□□□□□ -0.64
LCN10-201ENST00000341040 RBMY1DP0C7P1 496 aaKnown RBP11.08□□□□□ -0.64
LCN10-201ENST00000341040 GOLT1AQ6ZVE7 132 aa11.08□□□□□ -0.64
LCN10-201ENST00000341040 CYB561D1Q8N8Q1 229 aa11.08□□□□□ -0.64
LCN10-201ENST00000341040 FBN3Q75N90 2809 aa11.08□□□□□ -0.64
LCN10-201ENST00000341040 H3BMM0 161 aa11.08□□□□□ -0.64
LCN10-201ENST00000341040 PEX7O00628 323 aa11.08□□□□□ -0.64
LCN10-201ENST00000341040 IGKV3-20P01619 116 aa11.08□□□□□ -0.64
LCN10-201ENST00000341040 GNG5P63218 68 aa11.08□□□□□ -0.64
LCN10-201ENST00000341040 TOR2AQ5JU69 321 aa11.08□□□□□ -0.64
LCN10-201ENST00000341040 OR4B1Q8NGF8 309 aa11.08□□□□□ -0.64
LCN10-201ENST00000341040 IGKV2-40A0A087WW87 121 aaPredicted RBP11.07□□□□□ -0.64
LCN10-201ENST00000341040 IGKV2D-40P01614 121 aaPredicted RBP11.07□□□□□ -0.64
LCN10-201ENST00000341040 FRMD6-AS1P0C7T7 363 aa11.07□□□□□ -0.64
LCN10-201ENST00000341040 CNN1P51911 297 aaKnown RBP11.07□□□□□ -0.64
LCN10-201ENST00000341040 ZNF506Q5JVG8 444 aa11.07□□□□□ -0.64
LCN10-201ENST00000341040 TMEM78Q5T7P6 136 aa11.07□□□□□ -0.64
LCN10-201ENST00000341040 LINC00477Q96M19 166 aa11.07□□□□□ -0.64
LCN10-201ENST00000341040 CLUHP3Q96NS8 147 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms