RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 AMTP48728 403 aa7.92□□□□□ -1.14
RBFOX1-202ENST00000340209 SRSF1Q07955 248 aaKnown RBP eCLIP7.92□□□□□ -1.14
RBFOX1-202ENST00000340209 FAM110DQ8TAY7 271 aaPredicted RBP7.92□□□□□ -1.14
RBFOX1-202ENST00000340209 TMEM18Q96B42 140 aa7.92□□□□□ -1.14
RBFOX1-202ENST00000340209 AJUBAQ96IF1 538 aa7.92□□□□□ -1.14
RBFOX1-202ENST00000340209 OSTCQ9NRP0 149 aa7.92□□□□□ -1.14
RBFOX1-202ENST00000340209 C2CD3Q4AC94 2353 aa7.91□□□□□ -1.14
RBFOX1-202ENST00000340209 F8W735 103 aaPredicted RBP7.91□□□□□ -1.14
RBFOX1-202ENST00000340209 PMCHL1Q16048 86 aa7.91□□□□□ -1.14
RBFOX1-202ENST00000340209 TMEM183BQ1AE95 376 aa7.91□□□□□ -1.14
RBFOX1-202ENST00000340209 LINC00587B1AMM8 73 aa7.91□□□□□ -1.14
RBFOX1-202ENST00000340209 IGKV3-20P01619 116 aa7.91□□□□□ -1.14
RBFOX1-202ENST00000340209 PCP4P48539 62 aa7.91□□□□□ -1.14
RBFOX1-202ENST00000340209 SLAQ13239 276 aa7.91□□□□□ -1.14
RBFOX1-202ENST00000340209 ZC2HC1AQ96GY0 325 aa7.91□□□□□ -1.14
RBFOX1-202ENST00000340209 CCDC140Q96MF4 163 aa7.91□□□□□ -1.14
RBFOX1-202ENST00000340209 METTL26Q96S19 204 aa7.91□□□□□ -1.14
RBFOX1-202ENST00000340209 VGLL1Q99990 258 aa7.91□□□□□ -1.14
RBFOX1-202ENST00000340209 RPP21Q9H633 154 aaKnown RBP7.91□□□□□ -1.14
RBFOX1-202ENST00000340209 GCN1Q92616 2671 aaKnown RBP7.91□□□□□ -1.14
RBFOX1-202ENST00000340209 TRAV20A0A0B4J274 112 aa7.91□□□□□ -1.14
RBFOX1-202ENST00000340209 SPRY2O43597 315 aa7.91□□□□□ -1.14
RBFOX1-202ENST00000340209 G0S2P27469 103 aa7.91□□□□□ -1.14
RBFOX1-202ENST00000340209 ZNF414Q96IQ9 312 aa7.9□□□□□ -1.14
RBFOX1-202ENST00000340209 SIGLEC15Q6ZMC9 328 aa7.9□□□□□ -1.14
RBFOX1-202ENST00000340209 FMC1Q96HJ9 113 aa7.9□□□□□ -1.14
RBFOX1-202ENST00000340209 C16orf92Q96LL3 132 aa7.9□□□□□ -1.14
RBFOX1-202ENST00000340209 PYGO2Q9BRQ0 406 aa7.9□□□□□ -1.14
RBFOX1-202ENST00000340209 PRAC2D3DTV9 90 aa7.9□□□□□ -1.15
RBFOX1-202ENST00000340209 ZNF138P52744 262 aa7.9□□□□□ -1.15
RBFOX1-202ENST00000340209 UNQ9165/PRO28630Q6UXU0 137 aa7.9□□□□□ -1.15
RBFOX1-202ENST00000340209 S100A7AQ86SG5 101 aa7.9□□□□□ -1.15
RBFOX1-202ENST00000340209 GSN-AS1Q9NRJ2 163 aa7.9□□□□□ -1.15
RBFOX1-202ENST00000340209 S100A12P80511 92 aa7.89□□□□□ -1.15
RBFOX1-202ENST00000340209 ATOH7Q8N100 152 aa7.89□□□□□ -1.15
RBFOX1-202ENST00000340209 RCHY1Q96PM5 261 aa7.89□□□□□ -1.15
RBFOX1-202ENST00000340209 UNC79Q9P2D8 2635 aa7.89□□□□□ -1.15
RBFOX1-202ENST00000340209 NDUFS8O00217 210 aa7.89□□□□□ -1.15
RBFOX1-202ENST00000340209 ZNF502Q8TBZ5 544 aa7.89□□□□□ -1.15
RBFOX1-202ENST00000340209 GRAMD2BQ96HH9 432 aa7.89□□□□□ -1.15
RBFOX1-202ENST00000340209 A8MWL6 223 aa7.89□□□□□ -1.15
RBFOX1-202ENST00000340209 EDN2P20800 178 aa7.89□□□□□ -1.15
RBFOX1-202ENST00000340209 YPEL3P61236 119 aaPredicted RBP7.89□□□□□ -1.15
RBFOX1-202ENST00000340209 FAM209BQ5JX69 171 aa7.89□□□□□ -1.15
RBFOX1-202ENST00000340209 SRSF8Q9BRL6 282 aaKnown RBP7.89□□□□□ -1.15
RBFOX1-202ENST00000340209 LOC389332A0A1B0GUA5 103 aa7.88□□□□□ -1.15
RBFOX1-202ENST00000340209 IZUMO1RA6ND01 250 aa7.88□□□□□ -1.15
RBFOX1-202ENST00000340209 SIGLECL1Q8N7X8 197 aa7.88□□□□□ -1.15
RBFOX1-202ENST00000340209 LINC01356Q8N9X3 169 aa7.88□□□□□ -1.15
RBFOX1-202ENST00000340209 OR4X2Q8NGF9 303 aa7.88□□□□□ -1.15
RBFOX1-202ENST00000340209 DUX3Q96PT4 197 aa7.88□□□□□ -1.15
RBFOX1-202ENST00000340209 PAX1P15863 534 aa7.88□□□□□ -1.15
RBFOX1-202ENST00000340209 CTAG1AP78358 180 aa7.88□□□□□ -1.15
RBFOX1-202ENST00000340209 ZNF738Q8NE65 137 aa7.88□□□□□ -1.15
RBFOX1-202ENST00000340209 PIFOQ8TCI5 191 aa7.88□□□□□ -1.15
RBFOX1-202ENST00000340209 VN1R17PQ8TDU5 208 aa7.88□□□□□ -1.15
RBFOX1-202ENST00000340209 CBY1Q9Y3M2 126 aa7.88□□□□□ -1.15
RBFOX1-202ENST00000340209 DIRC3C9JPN6 131 aa7.88□□□□□ -1.15
RBFOX1-202ENST00000340209 HSBP1O75506 76 aa7.88□□□□□ -1.15
RBFOX1-202ENST00000340209 IGLC2P0DOY2 106 aa7.88□□□□□ -1.15
RBFOX1-202ENST00000340209 TCTAP57738 103 aa7.88□□□□□ -1.15
RBFOX1-202ENST00000340209 COTL1Q14019 142 aa7.88□□□□□ -1.15
RBFOX1-202ENST00000340209 EBI3Q14213 229 aa7.88□□□□□ -1.15
RBFOX1-202ENST00000340209 TM4SF20Q53R12 229 aa7.88□□□□□ -1.15
RBFOX1-202ENST00000340209 WDR73Q6P4I2 378 aa7.88□□□□□ -1.15
RBFOX1-202ENST00000340209 TMEM136Q6ZRR5 245 aa7.88□□□□□ -1.15
RBFOX1-202ENST00000340209 KLF2Q9Y5W3 355 aaPredicted RBP7.88□□□□□ -1.15
RBFOX1-202ENST00000340209 WI2-2373I1.2A0A1W2PRP0 233 aa7.87□□□□□ -1.15
RBFOX1-202ENST00000340209 F6UB75 175 aa7.87□□□□□ -1.15
RBFOX1-202ENST00000340209 ARMS2P0C7Q2 107 aa7.87□□□□□ -1.15
RBFOX1-202ENST00000340209 FXYD7P58549 80 aa7.87□□□□□ -1.15
RBFOX1-202ENST00000340209 PSG3Q16557 428 aa7.87□□□□□ -1.15
RBFOX1-202ENST00000340209 TSKUQ8WUA8 353 aa7.87□□□□□ -1.15
RBFOX1-202ENST00000340209 BORCS7Q96B45 105 aa7.87□□□□□ -1.15
RBFOX1-202ENST00000340209 TYMSP04818 313 aa7.87□□□□□ -1.15
RBFOX1-202ENST00000340209 PLP1P60201 277 aa7.87□□□□□ -1.15
RBFOX1-202ENST00000340209 LCN12Q6JVE5 192 aa7.87□□□□□ -1.15
RBFOX1-202ENST00000340209 LURAP1LQ8IV03 231 aa7.87□□□□□ -1.15
RBFOX1-202ENST00000340209 GTSF1Q8WW33 167 aa7.87□□□□□ -1.15
RBFOX1-202ENST00000340209 TMEM189A5PLL7 270 aa7.87□□□□□ -1.15
RBFOX1-202ENST00000340209 DEFB136Q30KP8 78 aa7.87□□□□□ -1.15
RBFOX1-202ENST00000340209 GDF5OSQ5U4N7 250 aa7.87□□□□□ -1.15
RBFOX1-202ENST00000340209 PAM16Q9Y3D7 125 aa7.87□□□□□ -1.15
RBFOX1-202ENST00000340209 LY96Q9Y6Y9 160 aa7.87□□□□□ -1.15
RBFOX1-202ENST00000340209 A0A1W2PRX2 142 aa7.86□□□□□ -1.15
RBFOX1-202ENST00000340209 HOXA3O43365 443 aaPredicted RBP7.86□□□□□ -1.15
RBFOX1-202ENST00000340209 MYCNOSP40205 109 aa7.86□□□□□ -1.15
RBFOX1-202ENST00000340209 WFDC11Q8NEX6 87 aa7.86□□□□□ -1.15
RBFOX1-202ENST00000340209 NDFIP1Q9BT67 221 aa7.86□□□□□ -1.15
RBFOX1-202ENST00000340209 VWC2LB2RUY7 222 aa7.86□□□□□ -1.15
RBFOX1-202ENST00000340209 LTAP01374 205 aa7.86□□□□□ -1.15
RBFOX1-202ENST00000340209 HLA-DQA1P01909 254 aa7.86□□□□□ -1.15
RBFOX1-202ENST00000340209 DEFB104AQ8WTQ1 72 aa7.86□□□□□ -1.15
RBFOX1-202ENST00000340209 MCRIP2Q9BUT9 160 aaKnown RBP7.86□□□□□ -1.15
RBFOX1-202ENST00000340209 SMAD5-AS1Q9Y6J3 95 aa7.86□□□□□ -1.15
RBFOX1-202ENST00000340209 HBBP68871 147 aa7.86□□□□□ -1.15
RBFOX1-202ENST00000340209 HIST1H1AQ02539 215 aaPredicted RBP7.86□□□□□ -1.15
RBFOX1-202ENST00000340209 Q6ZQT7 251 aa7.86□□□□□ -1.15
RBFOX1-202ENST00000340209 TMEM213A2RRL7 107 aa7.85□□□□□ -1.15
RBFOX1-202ENST00000340209 SH2D1AO60880 128 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms