RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 DEFB114Q30KQ6 69 aa5.89□□□□□ -1.47
TMC1-202ENST00000340019 SOHLH1Q5JUK2 328 aa5.89□□□□□ -1.47
TMC1-202ENST00000340019 IGFL4Q6B9Z1 124 aa5.89□□□□□ -1.47
TMC1-202ENST00000340019 MS4A6AQ9H2W1 248 aa5.89□□□□□ -1.47
TMC1-202ENST00000340019 PPP1R14DQ9NXH3 145 aa5.89□□□□□ -1.47
TMC1-202ENST00000340019 CMYA5Q8N3K9 4069 aa5.89□□□□□ -1.47
TMC1-202ENST00000340019 PEX7O00628 323 aa5.89□□□□□ -1.47
TMC1-202ENST00000340019 CEBPGP53567 150 aa5.89□□□□□ -1.47
TMC1-202ENST00000340019 ATG101Q9BSB4 218 aa5.89□□□□□ -1.47
TMC1-202ENST00000340019 PF4P02776 101 aa5.88□□□□□ -1.47
TMC1-202ENST00000340019 RNF182Q8N6D2 247 aa5.88□□□□□ -1.47
TMC1-202ENST00000340019 RPUSD4Q96CM3 377 aaKnown RBP5.88□□□□□ -1.47
TMC1-202ENST00000340019 MRPL53Q96EL3 112 aaKnown RBP5.88□□□□□ -1.47
TMC1-202ENST00000340019 C16orf92Q96LL3 132 aa5.88□□□□□ -1.47
TMC1-202ENST00000340019 CLEC5AQ9NY25 188 aa5.88□□□□□ -1.47
TMC1-202ENST00000340019 KLF12Q9Y4X4 402 aa5.88□□□□□ -1.47
TMC1-202ENST00000340019 IGKV3-7A0A075B6H7 116 aa5.88□□□□□ -1.47
TMC1-202ENST00000340019 DIRC3C9JPN6 131 aa5.88□□□□□ -1.47
TMC1-202ENST00000340019 ISLRO14498 428 aa5.88□□□□□ -1.47
TMC1-202ENST00000340019 RPL35P42766 123 aaKnown RBP5.88□□□□□ -1.47
TMC1-202ENST00000340019 FAM74A3Q4VXF1 159 aa5.88□□□□□ -1.47
TMC1-202ENST00000340019 SAMD13Q5VXD3 122 aa5.88□□□□□ -1.47
TMC1-202ENST00000340019 LCN12Q6JVE5 192 aa5.88□□□□□ -1.47
TMC1-202ENST00000340019 TMEM61Q8N0U2 210 aa5.88□□□□□ -1.47
TMC1-202ENST00000340019 CMTM2Q8TAZ6 248 aa5.88□□□□□ -1.47
TMC1-202ENST00000340019 C20orf173Q96LM9 149 aa5.88□□□□□ -1.47
TMC1-202ENST00000340019 LINC00479Q96M42 142 aa5.88□□□□□ -1.47
TMC1-202ENST00000340019 TRBV20OR9-2A0A075B6H5 130 aa5.88□□□□□ -1.47
TMC1-202ENST00000340019 K7EQG2 157 aa5.88□□□□□ -1.47
TMC1-202ENST00000340019 TSPAN4O14817 238 aa5.88□□□□□ -1.47
TMC1-202ENST00000340019 CD300EQ496F6 205 aaPredicted RBP5.88□□□□□ -1.47
TMC1-202ENST00000340019 GBGT1Q8N5D6 347 aa5.88□□□□□ -1.47
TMC1-202ENST00000340019 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.88□□□□□ -1.47
TMC1-202ENST00000340019 SPATA3Q8NHX4 192 aa5.88□□□□□ -1.47
TMC1-202ENST00000340019 DYNLRB2Q8TF09 96 aa5.88□□□□□ -1.47
TMC1-202ENST00000340019 STAB1Q9NY15 2570 aa5.87□□□□□ -1.47
TMC1-202ENST00000340019 COL6A5A8TX70 2615 aa5.87□□□□□ -1.47
TMC1-202ENST00000340019 TRAV2A0A0B4J234 112 aa5.87□□□□□ -1.47
TMC1-202ENST00000340019 ZNF727A8MUV8 499 aa5.87□□□□□ -1.47
TMC1-202ENST00000340019 ZNF705FA8MVS1 300 aaPredicted RBP5.87□□□□□ -1.47
TMC1-202ENST00000340019 IGLV2-11P01706 119 aa5.87□□□□□ -1.47
TMC1-202ENST00000340019 PSG3Q16557 428 aa5.87□□□□□ -1.47
TMC1-202ENST00000340019 TMEM183BQ1AE95 376 aa5.87□□□□□ -1.47
TMC1-202ENST00000340019 ZNF674Q2M3X9 581 aa5.87□□□□□ -1.47
TMC1-202ENST00000340019 FAM24BQ8N5W8 94 aa5.87□□□□□ -1.47
TMC1-202ENST00000340019 SMIM7Q9BQ49 75 aa5.87□□□□□ -1.47
TMC1-202ENST00000340019 TRAV25A0A0B4J276 109 aa5.87□□□□□ -1.47
TMC1-202ENST00000340019 C9JCJ5 164 aa5.87□□□□□ -1.47
TMC1-202ENST00000340019 PRAC2D3DTV9 90 aa5.87□□□□□ -1.47
TMC1-202ENST00000340019 IGLV1-51P01701 117 aa5.87□□□□□ -1.47
TMC1-202ENST00000340019 GUCA2BQ16661 112 aa5.87□□□□□ -1.47
TMC1-202ENST00000340019 SHISA2Q6UWI4 295 aa5.87□□□□□ -1.47
TMC1-202ENST00000340019 C12orf54Q6X4T0 127 aa5.87□□□□□ -1.47
TMC1-202ENST00000340019 GOLT1AQ6ZVE7 132 aa5.87□□□□□ -1.47
TMC1-202ENST00000340019 C3orf56Q8N813 242 aa5.87□□□□□ -1.47
TMC1-202ENST00000340019 IGF2BP2-AS1Q96M15 143 aa5.87□□□□□ -1.47
TMC1-202ENST00000340019 RPH3ALQ9UNE2 315 aa5.87□□□□□ -1.47
TMC1-202ENST00000340019 SERTM2A0A1B0GWG4 89 aa5.86□□□□□ -1.47
TMC1-202ENST00000340019 APOC3P02656 99 aa5.86□□□□□ -1.47
TMC1-202ENST00000340019 PRB4P10163 310 aaPredicted RBP5.86□□□□□ -1.47
TMC1-202ENST00000340019 AKR1C3P42330 323 aa5.86□□□□□ -1.47
TMC1-202ENST00000340019 CSN1S1P47710 185 aa5.86□□□□□ -1.47
TMC1-202ENST00000340019 CNN1P51911 297 aaKnown RBP5.86□□□□□ -1.47
TMC1-202ENST00000340019 TAS2R60P59551 318 aa5.86□□□□□ -1.47
TMC1-202ENST00000340019 RBPMS2Q6ZRY4 209 aaKnown RBP5.86□□□□□ -1.47
TMC1-202ENST00000340019 TMEM75Q8N9X5 138 aa5.86□□□□□ -1.47
TMC1-202ENST00000340019 NIPSNAP3BQ9BS92 247 aa5.86□□□□□ -1.47
TMC1-202ENST00000340019 TRAV34A0A0B4J273 112 aa5.86□□□□□ -1.47
TMC1-202ENST00000340019 TRBV6-1A0A0K0K1D8 114 aa5.86□□□□□ -1.47
TMC1-202ENST00000340019 IZUMO1RA6ND01 250 aa5.86□□□□□ -1.47
TMC1-202ENST00000340019 SAP30O75446 220 aa5.86□□□□□ -1.47
TMC1-202ENST00000340019 PAFAH1B2P68402 229 aa5.86□□□□□ -1.47
TMC1-202ENST00000340019 WFDC3Q8IUB2 231 aa5.86□□□□□ -1.47
TMC1-202ENST00000340019 FMC1Q96HJ9 113 aa5.86□□□□□ -1.47
TMC1-202ENST00000340019 SDF2L1Q9HCN8 221 aa5.86□□□□□ -1.47
TMC1-202ENST00000340019 NAT8Q9UHE5 227 aa5.86□□□□□ -1.47
TMC1-202ENST00000340019 ZNF256Q9Y2P7 627 aaPredicted RBP5.86□□□□□ -1.47
TMC1-202ENST00000340019 IGKV2-40A0A087WW87 121 aaPredicted RBP5.85□□□□□ -1.47
TMC1-202ENST00000340019 TRAV8-1A0A0A6YYK1 113 aa5.85□□□□□ -1.47
TMC1-202ENST00000340019 RBAKDNA6NC62 111 aa5.85□□□□□ -1.47
TMC1-202ENST00000340019 DNASE2O00115 360 aaPredicted RBP5.85□□□□□ -1.47
TMC1-202ENST00000340019 IGKV2D-40P01614 121 aaPredicted RBP5.85□□□□□ -1.47
TMC1-202ENST00000340019 S100A9P06702 114 aaKnown RBP5.85□□□□□ -1.47
TMC1-202ENST00000340019 ID1P41134 155 aa5.85□□□□□ -1.47
TMC1-202ENST00000340019 TFPI2P48307 235 aa5.85□□□□□ -1.47
TMC1-202ENST00000340019 TMEM241Q24JQ0 296 aa5.85□□□□□ -1.47
TMC1-202ENST00000340019 CENPWQ5EE01 88 aa5.85□□□□□ -1.47
TMC1-202ENST00000340019 WFDC9Q8NEX5 89 aa5.85□□□□□ -1.47
TMC1-202ENST00000340019 SPAG8Q99932 426 aaPredicted RBP5.85□□□□□ -1.47
TMC1-202ENST00000340019 PGPEP1LA6NFU8 196 aa5.85□□□□□ -1.47
TMC1-202ENST00000340019 SCO1O75880 301 aa5.85□□□□□ -1.47
TMC1-202ENST00000340019 LTAP01374 205 aa5.85□□□□□ -1.47
TMC1-202ENST00000340019 IGLV2-8P01709 118 aa5.85□□□□□ -1.47
TMC1-202ENST00000340019 SVBPQ8N300 66 aa5.85□□□□□ -1.47
TMC1-202ENST00000340019 OR2K2Q8NGT1 345 aa5.85□□□□□ -1.47
TMC1-202ENST00000340019 TVP23CQ96ET8 276 aa5.85□□□□□ -1.47
TMC1-202ENST00000340019 SGK494Q96LW2 274 aa5.85□□□□□ -1.47
TMC1-202ENST00000340019 SORL1Q92673 2214 aa5.85□□□□□ -1.47
TMC1-202ENST00000340019 K7EQM0 130 aa5.85□□□□□ -1.47
TMC1-202ENST00000340019 SNAPINO95295 136 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms