RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 TAF1LQ8IZX4 1826 aa10.53□□□□□ -0.72
USP47-202ENST00000339865 VWA8A3KMH1 1905 aa10.53□□□□□ -0.72
USP47-202ENST00000339865 KNCNA6PVL3 124 aa10.53□□□□□ -0.72
USP47-202ENST00000339865 CFHR2P36980 270 aa10.53□□□□□ -0.72
USP47-202ENST00000339865 TREML4Q6UXN2 200 aa10.53□□□□□ -0.72
USP47-202ENST00000339865 MRPL55Q7Z7F7 128 aaKnown RBP10.53□□□□□ -0.72
USP47-202ENST00000339865 F6UB75 175 aa10.53□□□□□ -0.72
USP47-202ENST00000339865 TIMM17AQ99595 171 aa10.53□□□□□ -0.72
USP47-202ENST00000339865 A0A1B0GX51 115 aa10.53□□□□□ -0.72
USP47-202ENST00000339865 ZCCHC24Q8N2G6 241 aaKnown RBP10.52□□□□□ -0.72
USP47-202ENST00000339865 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.52□□□□□ -0.72
USP47-202ENST00000339865 TRBV6-7A0A0A0MS04 114 aa10.52□□□□□ -0.72
USP47-202ENST00000339865 CELA3AP09093 270 aa10.52□□□□□ -0.72
USP47-202ENST00000339865 A0A1B0GUS0 222 aa10.52□□□□□ -0.73
USP47-202ENST00000339865 SHISA3A0PJX4 238 aa10.52□□□□□ -0.73
USP47-202ENST00000339865 RHODO00212 210 aa10.52□□□□□ -0.73
USP47-202ENST00000339865 IGFL4Q6B9Z1 124 aa10.52□□□□□ -0.73
USP47-202ENST00000339865 IGHV2OR16-5A0A0B4J2B6 119 aa10.52□□□□□ -0.73
USP47-202ENST00000339865 K7EP34 96 aa10.52□□□□□ -0.73
USP47-202ENST00000339865 AMTNQ6UX39 209 aa10.52□□□□□ -0.73
USP47-202ENST00000339865 SLC22A18ASQ8N1D0 253 aa10.52□□□□□ -0.73
USP47-202ENST00000339865 C17orf100A8MU93 164 aa10.52□□□□□ -0.73
USP47-202ENST00000339865 C1QTNF5Q9BXJ0 243 aa10.52□□□□□ -0.73
USP47-202ENST00000339865 H0YIZ8 118 aa10.52□□□□□ -0.73
USP47-202ENST00000339865 CLPSL2Q6UWE3 100 aa10.52□□□□□ -0.73
USP47-202ENST00000339865 U3KQE9 123 aa10.52□□□□□ -0.73
USP47-202ENST00000339865 IGHV4-4A0A075B6R2 117 aa10.51□□□□□ -0.73
USP47-202ENST00000339865 RNASE2P10153 161 aaKnown RBP10.51□□□□□ -0.73
USP47-202ENST00000339865 TRBV25-1A0A075B6N4 114 aa10.51□□□□□ -0.73
USP47-202ENST00000339865 IGLC2P0DOY2 106 aa10.51□□□□□ -0.73
USP47-202ENST00000339865 IGLC3P0DOY3 106 aa10.51□□□□□ -0.73
USP47-202ENST00000339865 HLA-DMBP28068 263 aa10.51□□□□□ -0.73
USP47-202ENST00000339865 TRPT1Q86TN4 253 aaKnown RBP10.51□□□□□ -0.73
USP47-202ENST00000339865 Q9HAA7 133 aa10.51□□□□□ -0.73
USP47-202ENST00000339865 MSRB2Q9Y3D2 182 aa10.51□□□□□ -0.73
USP47-202ENST00000339865 J3KT08 172 aa10.51□□□□□ -0.73
USP47-202ENST00000339865 LY6G6FQ5SQ64 297 aa10.51□□□□□ -0.73
USP47-202ENST00000339865 DKK1O94907 266 aa10.51□□□□□ -0.73
USP47-202ENST00000339865 Q96MF0 132 aa10.51□□□□□ -0.73
USP47-202ENST00000339865 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.51□□□□□ -0.73
USP47-202ENST00000339865 MBD3L4A6NDZ8 208 aaPredicted RBP10.51□□□□□ -0.73
USP47-202ENST00000339865 MBD3L3A6NE82 208 aaPredicted RBP10.51□□□□□ -0.73
USP47-202ENST00000339865 MBD3L5A6NJ08 208 aaPredicted RBP10.51□□□□□ -0.73
USP47-202ENST00000339865 MBD3L2Q8NHZ7 208 aaPredicted RBP10.51□□□□□ -0.73
USP47-202ENST00000339865 ZNF831Q5JPB2 1677 aa10.51□□□□□ -0.73
USP47-202ENST00000339865 A0A0U1RQV1 116 aa10.51□□□□□ -0.73
USP47-202ENST00000339865 COX6A1P12074 109 aa10.51□□□□□ -0.73
USP47-202ENST00000339865 DUX4L9Q6RFH8 374 aaPredicted RBP10.51□□□□□ -0.73
USP47-202ENST00000339865 RFNGQ9Y644 331 aa10.51□□□□□ -0.73
USP47-202ENST00000339865 TRBV7-1A0A0A6YYK4 115 aa10.5□□□□□ -0.73
USP47-202ENST00000339865 PLXNA3P51805 1871 aa10.5□□□□□ -0.73
USP47-202ENST00000339865 UNQ6494/PRO21346Q6UXR6 183 aa10.5□□□□□ -0.73
USP47-202ENST00000339865 MUSTN1Q8IVN3 82 aa10.5□□□□□ -0.73
USP47-202ENST00000339865 J3QKU1 62 aa10.5□□□□□ -0.73
USP47-202ENST00000339865 PSPNO60542 156 aa10.5□□□□□ -0.73
USP47-202ENST00000339865 BAALC-AS2P0C853 105 aa10.5□□□□□ -0.73
USP47-202ENST00000339865 CMC4P56277 68 aaPredicted RBP10.5□□□□□ -0.73
USP47-202ENST00000339865 ANAPC1Q9H1A4 1944 aa10.5□□□□□ -0.73
USP47-202ENST00000339865 IGKV3D-7A0A0C4DH55 119 aa10.5□□□□□ -0.73
USP47-202ENST00000339865 FGF16O43320 207 aa10.49□□□□□ -0.73
USP47-202ENST00000339865 MP68P56378 58 aa10.49□□□□□ -0.73
USP47-202ENST00000339865 LINC00479Q96M42 142 aa10.49□□□□□ -0.73
USP47-202ENST00000339865 ID3Q02535 119 aa10.49□□□□□ -0.73
USP47-202ENST00000339865 MPLKIPQ8TAP9 179 aa10.49□□□□□ -0.73
USP47-202ENST00000339865 A0A1B0GTI1 187 aa10.49□□□□□ -0.73
USP47-202ENST00000339865 FAM236AA0A1B0GUQ0 79 aa10.49□□□□□ -0.73
USP47-202ENST00000339865 FAM236BA0A1B0GV22 79 aa10.49□□□□□ -0.73
USP47-202ENST00000339865 NMSQ5H8A3 153 aa10.49□□□□□ -0.73
USP47-202ENST00000339865 LILRA6Q6PI73 481 aa10.49□□□□□ -0.73
USP47-202ENST00000339865 CFHR4Q92496 578 aa10.49□□□□□ -0.73
USP47-202ENST00000339865 IGKV1D-43A0A0B4J1Z2 117 aa10.49□□□□□ -0.73
USP47-202ENST00000339865 RFPL3SP0C7P2 107 aa10.49□□□□□ -0.73
USP47-202ENST00000339865 ARMS2P0C7Q2 107 aa10.49□□□□□ -0.73
USP47-202ENST00000339865 RPP25LQ8N5L8 163 aaKnown RBP10.49□□□□□ -0.73
USP47-202ENST00000339865 DENND4CQ5VZ89 1909 aa10.48□□□□□ -0.73
USP47-202ENST00000339865 LYNX1G3V0Z9 82 aa10.48□□□□□ -0.73
USP47-202ENST00000339865 ACYP1P07311 99 aa10.48□□□□□ -0.73
USP47-202ENST00000339865 LYNX1P0DP58 116 aa10.48□□□□□ -0.73
USP47-202ENST00000339865 IGHV1-2P23083 117 aa10.48□□□□□ -0.73
USP47-202ENST00000339865 BTCP35070 178 aa10.48□□□□□ -0.73
USP47-202ENST00000339865 C10orf55Q5SWW7 151 aa10.48□□□□□ -0.73
USP47-202ENST00000339865 BVES-AS1Q5T3Y7 98 aa10.48□□□□□ -0.73
USP47-202ENST00000339865 FAM90A1Q86YD7 464 aa10.48□□□□□ -0.73
USP47-202ENST00000339865 RNF183Q96D59 192 aa10.48□□□□□ -0.73
USP47-202ENST00000339865 FAM208BQ5VWN6 2430 aa10.48□□□□□ -0.73
USP47-202ENST00000339865 TRGV9Q99603 122 aa10.48□□□□□ -0.73
USP47-202ENST00000339865 ORMDL1Q9P0S3 153 aa10.48□□□□□ -0.73
USP47-202ENST00000339865 SIPA1L3O60292 1781 aaPredicted RBP10.48□□□□□ -0.73
USP47-202ENST00000339865 I3L3M4 83 aa10.48□□□□□ -0.73
USP47-202ENST00000339865 FUSP35637 526 aaKnown RBP eCLIP10.48□□□□□ -0.73
USP47-202ENST00000339865 SP5Q6BEB4 398 aaPredicted RBP10.48□□□□□ -0.73
USP47-202ENST00000339865 IGFBPL1Q8WX77 278 aa10.48□□□□□ -0.73
USP47-202ENST00000339865 IGKV1-5P01602 117 aa10.48□□□□□ -0.73
USP47-202ENST00000339865 IL17RELQ6ZVW7 336 aa10.48□□□□□ -0.73
USP47-202ENST00000339865 PPP1R32Q7Z5V6 425 aa10.48□□□□□ -0.73
USP47-202ENST00000339865 IGHV1-24A0A0C4DH33 117 aa10.47□□□□□ -0.73
USP47-202ENST00000339865 PRSS29PA6NIE9 313 aa10.47□□□□□ -0.73
USP47-202ENST00000339865 NTN5Q8WTR8 489 aaPredicted RBP10.47□□□□□ -0.73
USP47-202ENST00000339865 ADAMTSL1Q8N6G6 1762 aa10.47□□□□□ -0.73
USP47-202ENST00000339865 A0A096LPF7 62 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms