RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 CRIP2P52943 208 aaPredicted RBP5.68□□□□□ -1.5
SRFBP1-201ENST00000339397 DEFB1P60022 68 aa5.68□□□□□ -1.5
SRFBP1-201ENST00000339397 SSTP61278 116 aa5.68□□□□□ -1.5
SRFBP1-201ENST00000339397 Q86TA4 180 aa5.68□□□□□ -1.5
SRFBP1-201ENST00000339397 NUP35Q8NFH5 326 aa5.68□□□□□ -1.5
SRFBP1-201ENST00000339397 OR5R1Q8NH85 324 aa5.68□□□□□ -1.5
SRFBP1-201ENST00000339397 GTSF1Q8WW33 167 aa5.68□□□□□ -1.5
SRFBP1-201ENST00000339397 MBD6Q96DN6 1003 aa5.68□□□□□ -1.5
SRFBP1-201ENST00000339397 PITPNC1Q9UKF7 332 aa5.68□□□□□ -1.5
SRFBP1-201ENST00000339397 IGKV3-7A0A075B6H7 116 aa5.68□□□□□ -1.5
SRFBP1-201ENST00000339397 SMIM27A0A1W2PRY6 76 aa5.68□□□□□ -1.5
SRFBP1-201ENST00000339397 XKRY2A2RUG3 117 aa5.68□□□□□ -1.5
SRFBP1-201ENST00000339397 HIGD1CA8MV81 97 aa5.68□□□□□ -1.5
SRFBP1-201ENST00000339397 F2Z2F3 143 aa5.68□□□□□ -1.5
SRFBP1-201ENST00000339397 FSHBP01225 129 aa5.68□□□□□ -1.5
SRFBP1-201ENST00000339397 ARL3P36405 182 aa5.68□□□□□ -1.5
SRFBP1-201ENST00000339397 CDX1P47902 265 aaPredicted RBP5.68□□□□□ -1.5
SRFBP1-201ENST00000339397 GDF5OSQ5U4N7 250 aa5.68□□□□□ -1.5
SRFBP1-201ENST00000339397 HIST3H2BBQ8N257 126 aa5.68□□□□□ -1.5
SRFBP1-201ENST00000339397 TMEM256Q8N2U0 113 aa5.68□□□□□ -1.5
SRFBP1-201ENST00000339397 FMC1Q96HJ9 113 aa5.68□□□□□ -1.5
SRFBP1-201ENST00000339397 NEU1Q99519 415 aa5.68□□□□□ -1.5
SRFBP1-201ENST00000339397 SNURFLB1AK76 121 aa5.67□□□□□ -1.5
SRFBP1-201ENST00000339397 GATCO43716 136 aaKnown RBP5.67□□□□□ -1.5
SRFBP1-201ENST00000339397 IGLV1-40P01703 118 aa5.67□□□□□ -1.5
SRFBP1-201ENST00000339397 S100A9P06702 114 aaKnown RBP5.67□□□□□ -1.5
SRFBP1-201ENST00000339397 ZNF705DP0CH99 300 aaPredicted RBP5.67□□□□□ -1.5
SRFBP1-201ENST00000339397 ZNF705BP0CI00 300 aaPredicted RBP5.67□□□□□ -1.5
SRFBP1-201ENST00000339397 FABP4P15090 132 aa5.67□□□□□ -1.5
SRFBP1-201ENST00000339397 RPL7P18124 248 aaKnown RBP5.67□□□□□ -1.5
SRFBP1-201ENST00000339397 CFHR3Q02985 330 aa5.67□□□□□ -1.5
SRFBP1-201ENST00000339397 ERCC8Q13216 396 aa5.67□□□□□ -1.5
SRFBP1-201ENST00000339397 TMEM183AQ8IXX5 376 aa5.67□□□□□ -1.5
SRFBP1-201ENST00000339397 OR4X2Q8NGF9 303 aa5.67□□□□□ -1.5
SRFBP1-201ENST00000339397 BTF3L4Q96K17 158 aa5.67□□□□□ -1.5
SRFBP1-201ENST00000339397 SSBP4Q9BWG4 385 aaPredicted RBP5.67□□□□□ -1.5
SRFBP1-201ENST00000339397 PSG8Q9UQ74 426 aa5.67□□□□□ -1.5
SRFBP1-201ENST00000339397 MAST4O15021 2626 aa5.67□□□□□ -1.5
SRFBP1-201ENST00000339397 C19orf71A6NCJ1 209 aa5.67□□□□□ -1.5
SRFBP1-201ENST00000339397 S100A8P05109 93 aa5.67□□□□□ -1.5
SRFBP1-201ENST00000339397 RAB4BP61018 213 aa5.67□□□□□ -1.5
SRFBP1-201ENST00000339397 PSG3Q16557 428 aa5.67□□□□□ -1.5
SRFBP1-201ENST00000339397 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.67□□□□□ -1.5
SRFBP1-201ENST00000339397 Q6ZQT7 251 aa5.67□□□□□ -1.5
SRFBP1-201ENST00000339397 PRSS22Q9GZN4 317 aa5.67□□□□□ -1.5
SRFBP1-201ENST00000339397 MRPL18Q9H0U6 180 aaKnown RBP5.67□□□□□ -1.5
SRFBP1-201ENST00000339397 ZNF331Q9NQX6 463 aaPredicted RBP5.67□□□□□ -1.5
SRFBP1-201ENST00000339397 FAM223BA6NKX1 122 aa5.66□□□□□ -1.5
SRFBP1-201ENST00000339397 J3QLI3 93 aa5.66□□□□□ -1.5
SRFBP1-201ENST00000339397 CHEK1O14757 476 aa5.66□□□□□ -1.5
SRFBP1-201ENST00000339397 SRD5A1P18405 259 aa5.66□□□□□ -1.5
SRFBP1-201ENST00000339397 Q6YL49 198 aa5.66□□□□□ -1.5
SRFBP1-201ENST00000339397 FAM223AQ8IWN6 122 aa5.66□□□□□ -1.5
SRFBP1-201ENST00000339397 LRRC75A-AS1Q8N1F1 130 aa5.66□□□□□ -1.5
SRFBP1-201ENST00000339397 OR10D4PQ8NGN7 298 aa5.66□□□□□ -1.5
SRFBP1-201ENST00000339397 AAMDCQ9H7C9 122 aa5.66□□□□□ -1.5
SRFBP1-201ENST00000339397 TP53TG3Q9ULZ0 132 aa5.66□□□□□ -1.5
SRFBP1-201ENST00000339397 M0QZK8 103 aa5.66□□□□□ -1.5
SRFBP1-201ENST00000339397 RPLP1P05386 114 aaKnown RBP5.66□□□□□ -1.5
SRFBP1-201ENST00000339397 SMIM6P0DI80 62 aa5.66□□□□□ -1.5
SRFBP1-201ENST00000339397 CAMPP49913 170 aa5.66□□□□□ -1.5
SRFBP1-201ENST00000339397 SLAQ13239 276 aa5.66□□□□□ -1.5
SRFBP1-201ENST00000339397 LCN12Q6JVE5 192 aa5.66□□□□□ -1.5
SRFBP1-201ENST00000339397 FAM231DQ6ZW35 169 aa5.66□□□□□ -1.5
SRFBP1-201ENST00000339397 NAT8BQ9UHF3 227 aa5.66□□□□□ -1.5
SRFBP1-201ENST00000339397 TMSB15BA0A087X1C1 80 aa5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 TRAV8-2A0A0B4J237 113 aa5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 MUC21A0A0G2JKD1 596 aa5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 MUC21A0A140T8X8 626 aa5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 P01737 135 aa5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 CD33P20138 364 aa5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 PSMB8P28062 276 aa5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 ZNF80P51504 273 aaPredicted RBP5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 PDE6HQ13956 83 aa5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 PYY3Q5JQD4 70 aa5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 MUC21Q5SSG8 566 aa5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 DMRTA1Q5VZB9 504 aa5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 CYB5R2Q6BCY4 276 aa5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 TMEM136Q6ZRR5 245 aa5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 C18orf65Q6ZTR6 163 aa5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 LYPD1Q8N2G4 141 aa5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 PGLYRP4Q96LB8 373 aa5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 METTL26Q96S19 204 aa5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 HIST1H2BLQ99880 126 aa5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 TCEAL7Q9BRU2 100 aa5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 VPREB3Q9UKI3 123 aa5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 LINC00310P59036 64 aa5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 RELQ04864 619 aaPredicted RBP5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 SIGLECL1Q8N7X8 197 aa5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 TMEM75Q8N9X5 138 aa5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 TSKUQ8WUA8 353 aa5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 GRAMD2BQ96HH9 432 aa5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 RPP21Q9H633 154 aaKnown RBP5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 GAR1Q9NY12 217 aaKnown RBP5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 RNF24Q9Y225 148 aa5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 U3KQE9 123 aa5.65□□□□□ -1.5
SRFBP1-201ENST00000339397 IZUMO1RA6ND01 250 aa5.65□□□□□ -1.51
SRFBP1-201ENST00000339397 AMBPP02760 352 aa5.65□□□□□ -1.51
SRFBP1-201ENST00000339397 ZNF575Q86XF7 245 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms