RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 AAMDCQ9H7C9 122 aa11.82□□□□□ -0.52
LIMS1-202ENST00000338045 ZNF331Q9NQX6 463 aaPredicted RBP11.82□□□□□ -0.52
LIMS1-202ENST00000338045 MTORP42345 2549 aa11.82□□□□□ -0.52
LIMS1-202ENST00000338045 IGHV3OR16-13A0A075B7E8 117 aa11.81□□□□□ -0.52
LIMS1-202ENST00000338045 IGHV3-49A0A0A0MS15 119 aa11.81□□□□□ -0.52
LIMS1-202ENST00000338045 IGHV3-74A0A0B4J1X5 117 aa11.81□□□□□ -0.52
LIMS1-202ENST00000338045 H7BYZ3 331 aa11.81□□□□□ -0.52
LIMS1-202ENST00000338045 DLEU1O43261 78 aa11.81□□□□□ -0.52
LIMS1-202ENST00000338045 GCGP01275 180 aa11.81□□□□□ -0.52
LIMS1-202ENST00000338045 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.81□□□□□ -0.52
LIMS1-202ENST00000338045 FAM24BQ8N5W8 94 aa11.81□□□□□ -0.52
LIMS1-202ENST00000338045 SMIM12Q96EX1 92 aa11.81□□□□□ -0.52
LIMS1-202ENST00000338045 FMC1Q96HJ9 113 aa11.81□□□□□ -0.52
LIMS1-202ENST00000338045 C16orf95Q9H693 158 aa11.81□□□□□ -0.52
LIMS1-202ENST00000338045 DAZ1Q9NQZ3 744 aaKnown RBP11.81□□□□□ -0.52
LIMS1-202ENST00000338045 TRBV6-1A0A0K0K1D8 114 aa11.8□□□□□ -0.52
LIMS1-202ENST00000338045 ZNF320A2RRD8 509 aa11.8□□□□□ -0.52
LIMS1-202ENST00000338045 ZNF785A8K8V0 405 aa11.8□□□□□ -0.52
LIMS1-202ENST00000338045 PPP1R2P9O14990 202 aa11.8□□□□□ -0.52
LIMS1-202ENST00000338045 CRYBA1P05813 215 aa11.8□□□□□ -0.52
LIMS1-202ENST00000338045 CDX1P47902 265 aaPredicted RBP11.8□□□□□ -0.52
LIMS1-202ENST00000338045 UBE2G1P62253 170 aa11.8□□□□□ -0.52
LIMS1-202ENST00000338045 ELOBQ15370 118 aa11.8□□□□□ -0.52
LIMS1-202ENST00000338045 TCTEX1D4Q5JR98 221 aa11.8□□□□□ -0.52
LIMS1-202ENST00000338045 BAGE2Q86Y30 109 aa11.8□□□□□ -0.52
LIMS1-202ENST00000338045 RPH3ALQ9UNE2 315 aa11.8□□□□□ -0.52
LIMS1-202ENST00000338045 A0A1W2PS18 150 aa11.8□□□□□ -0.52
LIMS1-202ENST00000338045 M0R3E3 92 aa11.8□□□□□ -0.52
LIMS1-202ENST00000338045 IGLV2-11P01706 119 aa11.8□□□□□ -0.52
LIMS1-202ENST00000338045 CUBNO60494 3623 aa11.8□□□□□ -0.52
LIMS1-202ENST00000338045 IGHV7-4-1A0A0J9YVY3 117 aa11.79□□□□□ -0.52
LIMS1-202ENST00000338045 C1orf196B1AJZ1 125 aa11.79□□□□□ -0.52
LIMS1-202ENST00000338045 DIRC3C9JPN6 131 aa11.79□□□□□ -0.52
LIMS1-202ENST00000338045 LTAP01374 205 aa11.79□□□□□ -0.52
LIMS1-202ENST00000338045 RBX1P62877 108 aa11.79□□□□□ -0.52
LIMS1-202ENST00000338045 RPEL1Q2QD12 228 aa11.79□□□□□ -0.52
LIMS1-202ENST00000338045 GOLT1AQ6ZVE7 132 aa11.79□□□□□ -0.52
LIMS1-202ENST00000338045 SLC50A1Q9BRV3 221 aa11.79□□□□□ -0.52
LIMS1-202ENST00000338045 MLST8Q9BVC4 326 aa11.79□□□□□ -0.52
LIMS1-202ENST00000338045 IGHV4OR15-8A0A075B7B6 117 aa11.78□□□□□ -0.52
LIMS1-202ENST00000338045 A0A087WW49 117 aa11.78□□□□□ -0.52
LIMS1-202ENST00000338045 SERTM2A0A1B0GWG4 89 aa11.78□□□□□ -0.52
LIMS1-202ENST00000338045 PFN1P07737 140 aaKnown RBP11.78□□□□□ -0.52
LIMS1-202ENST00000338045 OR5I1Q13606 314 aa11.78□□□□□ -0.52
LIMS1-202ENST00000338045 TM4SF20Q53R12 229 aa11.78□□□□□ -0.52
LIMS1-202ENST00000338045 TMEM75Q8N9X5 138 aa11.78□□□□□ -0.52
LIMS1-202ENST00000338045 OR10G8Q8NGN5 311 aa11.78□□□□□ -0.52
LIMS1-202ENST00000338045 WFDC12Q8WWY7 111 aa11.78□□□□□ -0.52
LIMS1-202ENST00000338045 GRAMD2BQ96HH9 432 aa11.78□□□□□ -0.52
LIMS1-202ENST00000338045 JMJD8Q96S16 334 aa11.78□□□□□ -0.52
LIMS1-202ENST00000338045 UFC1Q9Y3C8 167 aa11.78□□□□□ -0.52
LIMS1-202ENST00000338045 URGCP-MRPS24S4R325 110 aa11.78□□□□□ -0.52
LIMS1-202ENST00000338045 LGALS9O00182 355 aa11.78□□□□□ -0.52
LIMS1-202ENST00000338045 SGK494Q96LW2 274 aa11.78□□□□□ -0.52
LIMS1-202ENST00000338045 SMPXQ9UHP9 88 aa11.78□□□□□ -0.52
LIMS1-202ENST00000338045 TRAV8-1A0A0A6YYK1 113 aa11.77□□□□□ -0.53
LIMS1-202ENST00000338045 A8MWP6 167 aa11.77□□□□□ -0.53
LIMS1-202ENST00000338045 K7EQM0 130 aa11.77□□□□□ -0.53
LIMS1-202ENST00000338045 CSN1S1P47710 185 aa11.77□□□□□ -0.53
LIMS1-202ENST00000338045 Q86TA4 180 aa11.77□□□□□ -0.53
LIMS1-202ENST00000338045 LINC01006Q8NI28 216 aa11.77□□□□□ -0.53
LIMS1-202ENST00000338045 C4orf3Q8WVX3 66 aa11.77□□□□□ -0.53
LIMS1-202ENST00000338045 IMMP2LQ96T52 175 aa11.77□□□□□ -0.53
LIMS1-202ENST00000338045 RHPN1-AS1Q9BWJ2 59 aa11.77□□□□□ -0.53
LIMS1-202ENST00000338045 OSTCQ9NRP0 149 aa11.77□□□□□ -0.53
LIMS1-202ENST00000338045 TRBV24-1A0A075B6N3 115 aa11.76□□□□□ -0.53
LIMS1-202ENST00000338045 TMEM213A2RRL7 107 aa11.76□□□□□ -0.53
LIMS1-202ENST00000338045 INAFM1C9JVW0 142 aa11.76□□□□□ -0.53
LIMS1-202ENST00000338045 CHEK1O14757 476 aa11.76□□□□□ -0.53
LIMS1-202ENST00000338045 MGST1P10620 155 aaKnown RBP11.76□□□□□ -0.53
LIMS1-202ENST00000338045 PSG3Q16557 428 aa11.76□□□□□ -0.53
LIMS1-202ENST00000338045 C8orf86Q6ZUL3 223 aa11.76□□□□□ -0.53
LIMS1-202ENST00000338045 NHLRC2Q8NBF2 726 aa11.76□□□□□ -0.53
LIMS1-202ENST00000338045 TRAV8-2A0A0B4J237 113 aa11.76□□□□□ -0.53
LIMS1-202ENST00000338045 NDUFA7O95182 113 aa11.76□□□□□ -0.53
LIMS1-202ENST00000338045 CXCL1P09341 107 aa11.76□□□□□ -0.53
LIMS1-202ENST00000338045 RAB5AP20339 215 aa11.76□□□□□ -0.53
LIMS1-202ENST00000338045 HLA-DMBP28068 263 aa11.76□□□□□ -0.53
LIMS1-202ENST00000338045 HOXD3P31249 432 aaPredicted RBP11.76□□□□□ -0.53
LIMS1-202ENST00000338045 ERVFC1-1P60608 527 aa11.76□□□□□ -0.53
LIMS1-202ENST00000338045 C18orf65Q6ZTR6 163 aa11.76□□□□□ -0.53
LIMS1-202ENST00000338045 Q71RC1 249 aaPredicted RBP11.76□□□□□ -0.53
LIMS1-202ENST00000338045 PYGO2Q9BRQ0 406 aa11.76□□□□□ -0.53
LIMS1-202ENST00000338045 V9GYV3 84 aa11.76□□□□□ -0.53
LIMS1-202ENST00000338045 TGIF2-C20orf24A0A0A6YYL0 155 aa11.75□□□□□ -0.53
LIMS1-202ENST00000338045 IGFL4Q6B9Z1 124 aa11.75□□□□□ -0.53
LIMS1-202ENST00000338045 LCN12Q6JVE5 192 aa11.75□□□□□ -0.53
LIMS1-202ENST00000338045 FAM231DQ6ZW35 169 aa11.75□□□□□ -0.53
LIMS1-202ENST00000338045 TMEM183AQ8IXX5 376 aa11.75□□□□□ -0.53
LIMS1-202ENST00000338045 MRPL53Q96EL3 112 aaKnown RBP11.75□□□□□ -0.53
LIMS1-202ENST00000338045 CLEC5AQ9NY25 188 aa11.75□□□□□ -0.53
LIMS1-202ENST00000338045 FOXL1Q12952 345 aa11.74□□□□□ -0.53
LIMS1-202ENST00000338045 KLF5Q13887 457 aaPredicted RBP11.74□□□□□ -0.53
LIMS1-202ENST00000338045 C1QL4Q86Z23 238 aa11.74□□□□□ -0.53
LIMS1-202ENST00000338045 NUDT10Q8NFP7 164 aa11.74□□□□□ -0.53
LIMS1-202ENST00000338045 FAM210BQ96KR6 192 aa11.74□□□□□ -0.53
LIMS1-202ENST00000338045 RNASE7Q9H1E1 156 aaKnown RBP11.74□□□□□ -0.53
LIMS1-202ENST00000338045 PSG8Q9UQ74 426 aa11.74□□□□□ -0.53
LIMS1-202ENST00000338045 ZFP30Q9Y2G7 519 aa11.74□□□□□ -0.53
LIMS1-202ENST00000338045 HIVEP1P15822 2718 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms