RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 CFHR2P36980 270 aa11.07□□□□□ -0.64
RTN4-202ENST00000337526 SLAQ13239 276 aa11.07□□□□□ -0.64
RTN4-202ENST00000337526 COX11Q9Y6N1 276 aa11.07□□□□□ -0.64
RTN4-202ENST00000337526 RBMY1BA6NDE4 496 aaKnown RBP11.07□□□□□ -0.64
RTN4-202ENST00000337526 RBMY1EA6NEQ0 496 aaKnown RBP11.07□□□□□ -0.64
RTN4-202ENST00000337526 TMEM238C9JI98 176 aa11.07□□□□□ -0.64
RTN4-202ENST00000337526 RBMY1DP0C7P1 496 aaKnown RBP11.07□□□□□ -0.64
RTN4-202ENST00000337526 RBMY1A1P0DJD3 496 aaKnown RBP11.07□□□□□ -0.64
RTN4-202ENST00000337526 RBMY1CP0DJD4 496 aa11.07□□□□□ -0.64
RTN4-202ENST00000337526 IGLC2P0DOY2 106 aa11.07□□□□□ -0.64
RTN4-202ENST00000337526 IGLC3P0DOY3 106 aa11.07□□□□□ -0.64
RTN4-202ENST00000337526 CSTL1Q9H114 145 aa11.07□□□□□ -0.64
RTN4-202ENST00000337526 ERCC8Q13216 396 aa11.06□□□□□ -0.64
RTN4-202ENST00000337526 TNFRSF6BO95407 300 aa11.06□□□□□ -0.64
RTN4-202ENST00000337526 HTN3P15516 51 aa11.06□□□□□ -0.64
RTN4-202ENST00000337526 TRGV4A0A0C4DH28 118 aa11.06□□□□□ -0.64
RTN4-202ENST00000337526 SAA4P35542 130 aa11.06□□□□□ -0.64
RTN4-202ENST00000337526 FAM231DQ6ZW35 169 aa11.06□□□□□ -0.64
RTN4-202ENST00000337526 Q8TCH9 128 aa11.06□□□□□ -0.64
RTN4-202ENST00000337526 SLX1AQ9BQ83 275 aa11.06□□□□□ -0.64
RTN4-202ENST00000337526 TRBV19A0A075B6N1 114 aa11.05□□□□□ -0.64
RTN4-202ENST00000337526 MMP23AO75900 390 aa11.05□□□□□ -0.64
RTN4-202ENST00000337526 CFAP161Q6P656 301 aa11.05□□□□□ -0.64
RTN4-202ENST00000337526 ZNF833PQ6ZTB9 187 aa11.05□□□□□ -0.64
RTN4-202ENST00000337526 RHPN1-AS1Q9BWJ2 59 aa11.05□□□□□ -0.64
RTN4-202ENST00000337526 C11orf52Q96A22 123 aa11.05□□□□□ -0.64
RTN4-202ENST00000337526 USMG5Q96IX5 58 aa11.05□□□□□ -0.64
RTN4-202ENST00000337526 FAM104BQ5XKR9 115 aa11.05□□□□□ -0.64
RTN4-202ENST00000337526 PIEZO1Q92508 2521 aa11.04□□□□□ -0.64
RTN4-202ENST00000337526 IGHV3-73A0A0B4J1V6 119 aa11.04□□□□□ -0.64
RTN4-202ENST00000337526 BPESC1Q9GZL8 116 aa11.04□□□□□ -0.64
RTN4-202ENST00000337526 M0R2P5 195 aa11.04□□□□□ -0.64
RTN4-202ENST00000337526 RCHY1Q96PM5 261 aa11.04□□□□□ -0.64
RTN4-202ENST00000337526 DYSFO75923 2080 aa11.04□□□□□ -0.64
RTN4-202ENST00000337526 B4DSR2 109 aa11.04□□□□□ -0.64
RTN4-202ENST00000337526 LOXP28300 417 aaPredicted RBP11.04□□□□□ -0.64
RTN4-202ENST00000337526 Q5PR19 223 aa11.04□□□□□ -0.64
RTN4-202ENST00000337526 TMEM75Q8N9X5 138 aa11.04□□□□□ -0.64
RTN4-202ENST00000337526 CHCHD5Q9BSY4 110 aa11.04□□□□□ -0.64
RTN4-202ENST00000337526 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.04□□□□□ -0.64
RTN4-202ENST00000337526 NDUFB8O95169 186 aa11.04□□□□□ -0.64
RTN4-202ENST00000337526 IGLV1-44P01699 117 aa11.04□□□□□ -0.64
RTN4-202ENST00000337526 MORN3Q6PF18 240 aaPredicted RBP11.04□□□□□ -0.64
RTN4-202ENST00000337526 CHAC1Q9BUX1 264 aa11.04□□□□□ -0.64
RTN4-202ENST00000337526 PLEKHB2Q96CS7 222 aa11.03□□□□□ -0.64
RTN4-202ENST00000337526 ANKHD1Q8IWZ3 2542 aaKnown RBP11.03□□□□□ -0.64
RTN4-202ENST00000337526 TICRRQ7Z2Z1 1910 aa11.03□□□□□ -0.64
RTN4-202ENST00000337526 LYPD6Q86Y78 171 aa11.03□□□□□ -0.64
RTN4-202ENST00000337526 CSPG4Q6UVK1 2322 aa11.03□□□□□ -0.64
RTN4-202ENST00000337526 FREM1Q5H8C1 2179 aa11.03□□□□□ -0.64
RTN4-202ENST00000337526 OVOL3O00110 214 aa11.03□□□□□ -0.64
RTN4-202ENST00000337526 PRR20EP86478 221 aa11.03□□□□□ -0.64
RTN4-202ENST00000337526 PRR20CP86479 221 aa11.03□□□□□ -0.64
RTN4-202ENST00000337526 PRR20DP86480 221 aa11.03□□□□□ -0.64
RTN4-202ENST00000337526 PRR20BP86481 221 aa11.03□□□□□ -0.64
RTN4-202ENST00000337526 PRR20AP86496 221 aa11.03□□□□□ -0.64
RTN4-202ENST00000337526 ADARB2-AS1A8MUL3 147 aa11.02□□□□□ -0.64
RTN4-202ENST00000337526 IGLL1P15814 213 aa11.02□□□□□ -0.64
RTN4-202ENST00000337526 IGLV3-9A0A075B6K5 115 aa11.02□□□□□ -0.65
RTN4-202ENST00000337526 A0A087WWL8 130 aa11.02□□□□□ -0.65
RTN4-202ENST00000337526 TEX43Q6ZNM6 134 aa11.02□□□□□ -0.65
RTN4-202ENST00000337526 DLX4Q92988 240 aaPredicted RBP11.02□□□□□ -0.65
RTN4-202ENST00000337526 TPSG1Q9NRR2 321 aa11.02□□□□□ -0.65
RTN4-202ENST00000337526 SMIM27A0A1W2PRY6 76 aa11.02□□□□□ -0.65
RTN4-202ENST00000337526 LINC00311Q8N616 119 aa11.02□□□□□ -0.65
RTN4-202ENST00000337526 ANAPC13Q9BS18 74 aa11.02□□□□□ -0.65
RTN4-202ENST00000337526 PGPEP1Q9NXJ5 209 aa11.02□□□□□ -0.65
RTN4-202ENST00000337526 PIP4P2Q8N4L2 257 aa11.01□□□□□ -0.65
RTN4-202ENST00000337526 SSC4DQ8WTU2 575 aa11.01□□□□□ -0.65
RTN4-202ENST00000337526 C8orf49Q96NF6 230 aa11.01□□□□□ -0.65
RTN4-202ENST00000337526 PRSS46E5RG02 174 aa11.01□□□□□ -0.65
RTN4-202ENST00000337526 C3orf36Q3SXR2 165 aa11.01□□□□□ -0.65
RTN4-202ENST00000337526 FAM223BA6NKX1 122 aa11.01□□□□□ -0.65
RTN4-202ENST00000337526 MALP21145 153 aa11.01□□□□□ -0.65
RTN4-202ENST00000337526 NPC2P61916 151 aa11.01□□□□□ -0.65
RTN4-202ENST00000337526 ATXN8Q156A1 80 aa11.01□□□□□ -0.65
RTN4-202ENST00000337526 POU2AF1Q16633 256 aa11.01□□□□□ -0.65
RTN4-202ENST00000337526 FAM223AQ8IWN6 122 aa11.01□□□□□ -0.65
RTN4-202ENST00000337526 SPOCK3Q9BQ16 436 aa11.01□□□□□ -0.65
RTN4-202ENST00000337526 DAZ1Q9NQZ3 744 aaKnown RBP11.01□□□□□ -0.65
RTN4-202ENST00000337526 ATP6V0E1O15342 81 aa11.01□□□□□ -0.65
RTN4-202ENST00000337526 CEACAM8P31997 349 aaPredicted RBP11.01□□□□□ -0.65
RTN4-202ENST00000337526 NCOA6Q14686 2063 aaPredicted RBP11□□□□□ -0.65
RTN4-202ENST00000337526 PRR25Q96S07 402 aa11□□□□□ -0.65
RTN4-202ENST00000337526 DENND4CQ5VZ89 1909 aa11□□□□□ -0.65
RTN4-202ENST00000337526 TRAV8-4A0A0B4J246 113 aa11□□□□□ -0.65
RTN4-202ENST00000337526 ESDP10768 282 aa11□□□□□ -0.65
RTN4-202ENST00000337526 DSCR9P59020 149 aa11□□□□□ -0.65
RTN4-202ENST00000337526 RPL36AP83881 106 aaKnown RBP11□□□□□ -0.65
RTN4-202ENST00000337526 GAGE2BQ13066 116 aa11□□□□□ -0.65
RTN4-202ENST00000337526 GAGE2EQ4V326 116 aa11□□□□□ -0.65
RTN4-202ENST00000337526 TEX36Q5VZQ5 186 aa11□□□□□ -0.65
RTN4-202ENST00000337526 RPL36ALQ969Q0 106 aaKnown RBP11□□□□□ -0.65
RTN4-202ENST00000337526 GAGE2DQ9UEU5 116 aa11□□□□□ -0.65
RTN4-202ENST00000337526 LINC00158P58513 81 aa11□□□□□ -0.65
RTN4-202ENST00000337526 PRR30Q53SZ7 412 aaPredicted RBP11□□□□□ -0.65
RTN4-202ENST00000337526 DPH3Q96FX2 82 aa11□□□□□ -0.65
RTN4-202ENST00000337526 GTSF1LQ9H1H1 148 aa11□□□□□ -0.65
RTN4-202ENST00000337526 MYO18BQ8IUG5 2567 aa11□□□□□ -0.65
RTN4-202ENST00000337526 DIAPH2-AS1Q14236 149 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms