RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 IGKV2-40A0A087WW87 121 aaPredicted RBP9.97□□□□□ -0.81
FN1-202ENST00000336916 IGKV2D-40P01614 121 aaPredicted RBP9.97□□□□□ -0.81
FN1-202ENST00000336916 TCRAP04437 139 aa9.97□□□□□ -0.81
FN1-202ENST00000336916 A0A1B0GV90 55 aa9.96□□□□□ -0.81
FN1-202ENST00000336916 ADMP35318 185 aa9.96□□□□□ -0.81
FN1-202ENST00000336916 Q96MF0 132 aa9.96□□□□□ -0.81
FN1-202ENST00000336916 LAMTOR3Q9UHA4 124 aa9.96□□□□□ -0.81
FN1-202ENST00000336916 PLA2G2CQ5R387 149 aa9.96□□□□□ -0.81
FN1-202ENST00000336916 C8orf31Q8N9H6 132 aa9.96□□□□□ -0.82
FN1-202ENST00000336916 TMEM158Q8WZ71 300 aa9.96□□□□□ -0.82
FN1-202ENST00000336916 TRAV8-4A0A0B4J246 113 aa9.96□□□□□ -0.82
FN1-202ENST00000336916 EXOC3-AS1Q8N2X6 119 aa9.96□□□□□ -0.82
FN1-202ENST00000336916 FAM19A2Q8N3H0 131 aa9.96□□□□□ -0.82
FN1-202ENST00000336916 NDUFS6O75380 124 aaKnown RBP9.95□□□□□ -0.82
FN1-202ENST00000336916 SHANK2-AS3Q9BTD1 123 aa9.95□□□□□ -0.82
FN1-202ENST00000336916 TIMM21Q9BVV7 248 aa9.95□□□□□ -0.82
FN1-202ENST00000336916 H3BQ85 93 aa9.95□□□□□ -0.82
FN1-202ENST00000336916 ELANEP08246 267 aa9.95□□□□□ -0.82
FN1-202ENST00000336916 ZNF833PQ6ZTB9 187 aa9.95□□□□□ -0.82
FN1-202ENST00000336916 INAFM2P0DMQ5 153 aa9.95□□□□□ -0.82
FN1-202ENST00000336916 IGKV1D-17A0A075B6S4 117 aa9.95□□□□□ -0.82
FN1-202ENST00000336916 IGHV4-39P01824 125 aa9.95□□□□□ -0.82
FN1-202ENST00000336916 CFHR2P36980 270 aa9.95□□□□□ -0.82
FN1-202ENST00000336916 TMEM95Q3KNT9 176 aa9.95□□□□□ -0.82
FN1-202ENST00000336916 TEX36Q5VZQ5 186 aa9.95□□□□□ -0.82
FN1-202ENST00000336916 DLX4Q92988 240 aaPredicted RBP9.95□□□□□ -0.82
FN1-202ENST00000336916 D6R8Y8 96 aa9.95□□□□□ -0.82
FN1-202ENST00000336916 LAIR2Q6ISS4 152 aa9.95□□□□□ -0.82
FN1-202ENST00000336916 C11orf44Q8N8P7 122 aa9.95□□□□□ -0.82
FN1-202ENST00000336916 CSTL1Q9H114 145 aa9.95□□□□□ -0.82
FN1-202ENST00000336916 KAAG1Q9UBP8 84 aa9.95□□□□□ -0.82
FN1-202ENST00000336916 CDKN1BP46527 198 aa9.94□□□□□ -0.82
FN1-202ENST00000336916 KLRD1Q13241 179 aa9.94□□□□□ -0.82
FN1-202ENST00000336916 NKAPP1Q8N9T2 125 aa9.94□□□□□ -0.82
FN1-202ENST00000336916 ORAOV1Q8WV07 137 aa9.94□□□□□ -0.82
FN1-202ENST00000336916 I3L3M4 83 aa9.94□□□□□ -0.82
FN1-202ENST00000336916 RNF223E7ERA6 249 aa9.94□□□□□ -0.82
FN1-202ENST00000336916 GATD1Q8NB37 220 aa9.94□□□□□ -0.82
FN1-202ENST00000336916 SH2D1AO60880 128 aa9.94□□□□□ -0.82
FN1-202ENST00000336916 SPXQ9BT56 116 aa9.94□□□□□ -0.82
FN1-202ENST00000336916 RPL32P62910 135 aaKnown RBP9.94□□□□□ -0.82
FN1-202ENST00000336916 GAGE13Q4V321 117 aa9.94□□□□□ -0.82
FN1-202ENST00000336916 BCL6BQ8N143 479 aaPredicted RBP9.93□□□□□ -0.82
FN1-202ENST00000336916 FGFBP3Q8TAT2 258 aa9.93□□□□□ -0.82
FN1-202ENST00000336916 BRD3OSQ6XYD6 125 aa9.93□□□□□ -0.82
FN1-202ENST00000336916 ZNF319Q9P2F9 582 aa9.93□□□□□ -0.82
FN1-202ENST00000336916 IGKV1-27A0A075B6S5 117 aa9.93□□□□□ -0.82
FN1-202ENST00000336916 LINC00518Q8N0U6 118 aa9.93□□□□□ -0.82
FN1-202ENST00000336916 THAP8Q8NA92 274 aa9.93□□□□□ -0.82
FN1-202ENST00000336916 PIP4P1Q86T03 277 aa9.93□□□□□ -0.82
FN1-202ENST00000336916 ETV2O00321 342 aaPredicted RBP9.93□□□□□ -0.82
FN1-202ENST00000336916 ZNF48Q96MX3 618 aaPredicted RBP9.93□□□□□ -0.82
FN1-202ENST00000336916 NUP35Q8NFH5 326 aa9.92□□□□□ -0.82
FN1-202ENST00000336916 TMEM14CQ9P0S9 112 aa9.92□□□□□ -0.82
FN1-202ENST00000336916 IGKV1-12A0A0C4DH73 117 aa9.92□□□□□ -0.82
FN1-202ENST00000336916 IGKV1D-12P01611 117 aa9.92□□□□□ -0.82
FN1-202ENST00000336916 MST1LQ2TV78 715 aa9.92□□□□□ -0.82
FN1-202ENST00000336916 KLF17Q5JT82 389 aaPredicted RBP9.92□□□□□ -0.82
FN1-202ENST00000336916 SAMD5Q5TGI4 173 aa9.92□□□□□ -0.82
FN1-202ENST00000336916 MUC21A0A0G2JKD1 596 aa9.92□□□□□ -0.82
FN1-202ENST00000336916 MUC21A0A140T8X8 626 aa9.92□□□□□ -0.82
FN1-202ENST00000336916 F5H768 121 aa9.92□□□□□ -0.82
FN1-202ENST00000336916 RNASE2P10153 161 aaKnown RBP9.92□□□□□ -0.82
FN1-202ENST00000336916 SRSF4Q08170 494 aaKnown RBP9.92□□□□□ -0.82
FN1-202ENST00000336916 LYL1P12980 280 aa9.92□□□□□ -0.82
FN1-202ENST00000336916 VWC2LB2RUY7 222 aa9.92□□□□□ -0.82
FN1-202ENST00000336916 CLPSP04118 112 aa9.92□□□□□ -0.82
FN1-202ENST00000336916 SYNJ2BPP57105 145 aa9.92□□□□□ -0.82
FN1-202ENST00000336916 LENEPQ9Y5L5 61 aa9.92□□□□□ -0.82
FN1-202ENST00000336916 PRIMA1Q86XR5 153 aa9.92□□□□□ -0.82
FN1-202ENST00000336916 SHISA3A0PJX4 238 aa9.92□□□□□ -0.82
FN1-202ENST00000336916 LY6G6FQ5SQ64 297 aa9.91□□□□□ -0.82
FN1-202ENST00000336916 TMEM243Q9BU79 118 aa9.91□□□□□ -0.82
FN1-202ENST00000336916 TRBV20-1A0A075B6N2 111 aa9.91□□□□□ -0.82
FN1-202ENST00000336916 PFN1P07737 140 aaKnown RBP9.91□□□□□ -0.82
FN1-202ENST00000336916 C1orf159Q96HA4 380 aa9.91□□□□□ -0.82
FN1-202ENST00000336916 Q5BKY6 102 aa9.91□□□□□ -0.82
FN1-202ENST00000336916 LINC01551Q86U37 167 aa9.91□□□□□ -0.82
FN1-202ENST00000336916 NDUFA4L2Q9NRX3 87 aa9.91□□□□□ -0.82
FN1-202ENST00000336916 VPREB3Q9UKI3 123 aa9.91□□□□□ -0.82
FN1-202ENST00000336916 INS-IGF2F8WCM5 200 aa9.91□□□□□ -0.82
FN1-202ENST00000336916 TMEM249Q2WGJ8 235 aa9.91□□□□□ -0.82
FN1-202ENST00000336916 MST1P26927 711 aa9.91□□□□□ -0.82
FN1-202ENST00000336916 RBMY1FQ15415 496 aaKnown RBP9.91□□□□□ -0.82
FN1-202ENST00000336916 TCTEX1D4Q5JR98 221 aa9.91□□□□□ -0.82
FN1-202ENST00000336916 LYZL1Q6UWQ5 148 aa9.91□□□□□ -0.82
FN1-202ENST00000336916 LSM4Q9Y4Z0 139 aaKnown RBP9.91□□□□□ -0.82
FN1-202ENST00000336916 FN1P02751 2386 aaKnown RBP9.91□□□□□ -0.82
FN1-202ENST00000336916 BTCP35070 178 aa9.91□□□□□ -0.82
FN1-202ENST00000336916 C9orf66Q5T8R8 295 aa9.9□□□□□ -0.82
FN1-202ENST00000336916 ANAPC10Q9UM13 185 aa9.9□□□□□ -0.82
FN1-202ENST00000336916 TNRC6BQ9UPQ9 1833 aaKnown RBP9.9□□□□□ -0.82
FN1-202ENST00000336916 ZNF492Q9P255 531 aa9.9□□□□□ -0.82
FN1-202ENST00000336916 UBE2CO00762 179 aa9.9□□□□□ -0.82
FN1-202ENST00000336916 COL8A2P25067 703 aa9.9□□□□□ -0.82
FN1-202ENST00000336916 DMRTA1Q5VZB9 504 aa9.9□□□□□ -0.82
FN1-202ENST00000336916 IGLV1-44P01699 117 aa9.9□□□□□ -0.82
FN1-202ENST00000336916 A0A1W2PPI3 338 aa9.9□□□□□ -0.82
FN1-202ENST00000336916 HIST1H2BKO60814 126 aa9.9□□□□□ -0.82
FN1-202ENST00000336916 HIST1H2BJP06899 126 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms