RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 ZNF561-AS1K7EIQ3 104 aa10.57□□□□□ -0.72
HLCS-201ENST00000336648 CEND1Q8N111 149 aa10.57□□□□□ -0.72
HLCS-201ENST00000336648 TAL2Q16559 108 aa10.56□□□□□ -0.72
HLCS-201ENST00000336648 FAM231DQ6ZW35 169 aa10.56□□□□□ -0.72
HLCS-201ENST00000336648 CRIPAKQ8N1N5 446 aa10.56□□□□□ -0.72
HLCS-201ENST00000336648 TDRD6O60522 2096 aaKnown RBP10.56□□□□□ -0.72
HLCS-201ENST00000336648 SMIM20Q8N5G0 67 aa10.56□□□□□ -0.72
HLCS-201ENST00000336648 RMI2Q96E14 147 aa10.56□□□□□ -0.72
HLCS-201ENST00000336648 PRO1854Q9UHT4 67 aa10.56□□□□□ -0.72
HLCS-201ENST00000336648 LMO1P25800 156 aa10.56□□□□□ -0.72
HLCS-201ENST00000336648 FAM186AA6NE01 2351 aa10.56□□□□□ -0.72
HLCS-201ENST00000336648 BAALCQ8WXS3 180 aa10.56□□□□□ -0.72
HLCS-201ENST00000336648 SHISA9B4DS77 424 aa10.55□□□□□ -0.72
HLCS-201ENST00000336648 ACYP1P07311 99 aa10.55□□□□□ -0.72
HLCS-201ENST00000336648 GATA4P43694 442 aa10.55□□□□□ -0.72
HLCS-201ENST00000336648 SPTBP11277 2137 aa10.55□□□□□ -0.72
HLCS-201ENST00000336648 TMEM14BQ9NUH8 114 aa10.55□□□□□ -0.72
HLCS-201ENST00000336648 TMEM14CQ9P0S9 112 aa10.55□□□□□ -0.72
HLCS-201ENST00000336648 TP53TG1Q9Y2A0 90 aa10.55□□□□□ -0.72
HLCS-201ENST00000336648 PIKFYVEQ9Y2I7 2098 aa10.55□□□□□ -0.72
HLCS-201ENST00000336648 OVOL3O00110 214 aa10.55□□□□□ -0.72
HLCS-201ENST00000336648 SAA4P35542 130 aa10.55□□□□□ -0.72
HLCS-201ENST00000336648 LY6DQ14210 128 aa10.55□□□□□ -0.72
HLCS-201ENST00000336648 A0A087WWL8 130 aa10.55□□□□□ -0.72
HLCS-201ENST00000336648 C2orf66Q6UXQ4 117 aa10.55□□□□□ -0.72
HLCS-201ENST00000336648 TINCRA0A1B0GVN0 87 aa10.54□□□□□ -0.72
HLCS-201ENST00000336648 BRD3OSQ6XYD6 125 aa10.54□□□□□ -0.72
HLCS-201ENST00000336648 DOCK4Q8N1I0 1966 aa10.54□□□□□ -0.72
HLCS-201ENST00000336648 HLA-DMBP28068 263 aa10.54□□□□□ -0.72
HLCS-201ENST00000336648 Q0VFX4 171 aa10.54□□□□□ -0.72
HLCS-201ENST00000336648 ARID2Q68CP9 1835 aa10.54□□□□□ -0.72
HLCS-201ENST00000336648 LINC01619G3V211 115 aa10.54□□□□□ -0.72
HLCS-201ENST00000336648 NRXN2Q9P2S2 1712 aa10.54□□□□□ -0.72
HLCS-201ENST00000336648 COL4A1P02462 1669 aa10.54□□□□□ -0.72
HLCS-201ENST00000336648 DEFB131AP59861 70 aa10.54□□□□□ -0.72
HLCS-201ENST00000336648 UBE2E2Q96LR5 201 aa10.54□□□□□ -0.72
HLCS-201ENST00000336648 POLR2AP24928 1970 aaKnown RBP10.54□□□□□ -0.72
HLCS-201ENST00000336648 COX8AP10176 69 aa10.54□□□□□ -0.72
HLCS-201ENST00000336648 THAP8Q8NA92 274 aa10.54□□□□□ -0.72
HLCS-201ENST00000336648 LINC00311Q8N616 119 aa10.53□□□□□ -0.72
HLCS-201ENST00000336648 NDUFA4L2Q9NRX3 87 aa10.53□□□□□ -0.72
HLCS-201ENST00000336648 TRBV19A0A075B6N1 114 aa10.53□□□□□ -0.72
HLCS-201ENST00000336648 PFN2P35080 140 aa10.53□□□□□ -0.72
HLCS-201ENST00000336648 BVES-AS1Q5T3Y7 98 aa10.53□□□□□ -0.72
HLCS-201ENST00000336648 C18orf32Q8TCD1 76 aa10.53□□□□□ -0.72
HLCS-201ENST00000336648 SMIM2Q9BVW6 85 aa10.53□□□□□ -0.72
HLCS-201ENST00000336648 PRB4P10163 310 aaPredicted RBP10.53□□□□□ -0.72
HLCS-201ENST00000336648 LGALS9BQ3B8N2 356 aa10.53□□□□□ -0.72
HLCS-201ENST00000336648 LGALS9CQ6DKI2 356 aa10.53□□□□□ -0.72
HLCS-201ENST00000336648 IGHV1OR15-1A0A075B7D0 117 aa10.53□□□□□ -0.72
HLCS-201ENST00000336648 NDUFA4O00483 81 aa10.53□□□□□ -0.72
HLCS-201ENST00000336648 IGLC2P0DOY2 106 aa10.53□□□□□ -0.72
HLCS-201ENST00000336648 IGLC3P0DOY3 106 aa10.53□□□□□ -0.72
HLCS-201ENST00000336648 KLF5Q13887 457 aaPredicted RBP10.53□□□□□ -0.72
HLCS-201ENST00000336648 F6UB75 175 aa10.52□□□□□ -0.72
HLCS-201ENST00000336648 MSMBP08118 114 aa10.52□□□□□ -0.72
HLCS-201ENST00000336648 ZNF833PQ6ZTB9 187 aa10.52□□□□□ -0.72
HLCS-201ENST00000336648 CDKN1BP46527 198 aa10.52□□□□□ -0.73
HLCS-201ENST00000336648 HS3ST6Q96QI5 342 aa10.52□□□□□ -0.73
HLCS-201ENST00000336648 J3QLI3 93 aa10.52□□□□□ -0.73
HLCS-201ENST00000336648 GNLYP22749 145 aa10.52□□□□□ -0.73
HLCS-201ENST00000336648 COL8A2P25067 703 aa10.52□□□□□ -0.73
HLCS-201ENST00000336648 DEFB121Q5J5C9 76 aa10.52□□□□□ -0.73
HLCS-201ENST00000336648 MRPL55Q7Z7F7 128 aaKnown RBP10.52□□□□□ -0.73
HLCS-201ENST00000336648 MSRB2Q9Y3D2 182 aa10.52□□□□□ -0.73
HLCS-201ENST00000336648 A0A0G2JRQ6 117 aa10.52□□□□□ -0.73
HLCS-201ENST00000336648 DAD1P61803 113 aa10.52□□□□□ -0.73
HLCS-201ENST00000336648 PSME4Q14997 1843 aa10.51□□□□□ -0.73
HLCS-201ENST00000336648 SNRNP200O75643 2136 aaKnown RBP10.51□□□□□ -0.73
HLCS-201ENST00000336648 ATOX1O00244 68 aa10.51□□□□□ -0.73
HLCS-201ENST00000336648 Q6ZRM9 215 aa10.51□□□□□ -0.73
HLCS-201ENST00000336648 BRCA1P38398 1863 aaKnown RBP10.51□□□□□ -0.73
HLCS-201ENST00000336648 ETV2O00321 342 aaPredicted RBP10.51□□□□□ -0.73
HLCS-201ENST00000336648 DEFB130BP0DP73 79 aa10.51□□□□□ -0.73
HLCS-201ENST00000336648 DEFB130AP0DP74 79 aa10.51□□□□□ -0.73
HLCS-201ENST00000336648 SPATA25Q9BR10 227 aa10.51□□□□□ -0.73
HLCS-201ENST00000336648 PKIGQ9Y2B9 76 aa10.51□□□□□ -0.73
HLCS-201ENST00000336648 PRSS57Q6UWY2 283 aa10.51□□□□□ -0.73
HLCS-201ENST00000336648 LYPD2Q6UXB3 125 aa10.51□□□□□ -0.73
HLCS-201ENST00000336648 NTN5Q8WTR8 489 aaPredicted RBP10.51□□□□□ -0.73
HLCS-201ENST00000336648 BPESC1Q9GZL8 116 aa10.51□□□□□ -0.73
HLCS-201ENST00000336648 H3BMG7 143 aa10.5□□□□□ -0.73
HLCS-201ENST00000336648 APOC4P55056 127 aa10.5□□□□□ -0.73
HLCS-201ENST00000336648 PYGO2Q9BRQ0 406 aa10.5□□□□□ -0.73
HLCS-201ENST00000336648 IGHV1-69DA0A0B4J2H0 117 aa10.5□□□□□ -0.73
HLCS-201ENST00000336648 SIVA1O15304 175 aa10.5□□□□□ -0.73
HLCS-201ENST00000336648 IGHV1-69P01742 117 aa10.5□□□□□ -0.73
HLCS-201ENST00000336648 IGKV1-16P04430 117 aa10.5□□□□□ -0.73
HLCS-201ENST00000336648 MP68P56378 58 aa10.5□□□□□ -0.73
HLCS-201ENST00000336648 LOC285556D6RIA3 1793 aa10.5□□□□□ -0.73
HLCS-201ENST00000336648 E7EQL1 145 aa10.5□□□□□ -0.73
HLCS-201ENST00000336648 C20orf78Q9BR46 151 aa10.5□□□□□ -0.73
HLCS-201ENST00000336648 NDUFA12Q9UI09 145 aa10.5□□□□□ -0.73
HLCS-201ENST00000336648 ZNF318Q5VUA4 2279 aa10.5□□□□□ -0.73
HLCS-201ENST00000336648 GREB1LQ9C091 1923 aaPredicted RBP10.5□□□□□ -0.73
HLCS-201ENST00000336648 K7EMI3 77 aa10.49□□□□□ -0.73
HLCS-201ENST00000336648 ATP6V0E1O15342 81 aa10.49□□□□□ -0.73
HLCS-201ENST00000336648 IGFL4Q6B9Z1 124 aa10.49□□□□□ -0.73
HLCS-201ENST00000336648 ORMDL1Q9P0S3 153 aa10.49□□□□□ -0.73
HLCS-201ENST00000336648 ESPL1Q14674 2120 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms