RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 TMEM160Q9NX00 188 aa5.89□□□□□ -1.47
EPHA3-201ENST00000336596 KIAA2026Q5HYC2 2103 aa5.89□□□□□ -1.47
EPHA3-201ENST00000336596 ZNF503-AS2A6NEH8 195 aa5.89□□□□□ -1.47
EPHA3-201ENST00000336596 DPM2O94777 84 aa5.89□□□□□ -1.47
EPHA3-201ENST00000336596 CFPP27918 469 aa5.89□□□□□ -1.47
EPHA3-201ENST00000336596 PRR31Q5SQ13 230 aa5.89□□□□□ -1.47
EPHA3-201ENST00000336596 KLF12Q9Y4X4 402 aa5.89□□□□□ -1.47
EPHA3-201ENST00000336596 LOC107984156A0A0G2JMH3 177 aa5.89□□□□□ -1.47
EPHA3-201ENST00000336596 ID3Q02535 119 aa5.89□□□□□ -1.47
EPHA3-201ENST00000336596 ARL17AQ8IVW1 177 aa5.89□□□□□ -1.47
EPHA3-201ENST00000336596 DNAJC30Q96LL9 226 aa5.89□□□□□ -1.47
EPHA3-201ENST00000336596 TMEM14CQ9P0S9 112 aa5.89□□□□□ -1.47
EPHA3-201ENST00000336596 LEPROTO15243 131 aa5.88□□□□□ -1.47
EPHA3-201ENST00000336596 ZNF114Q8NC26 417 aa5.88□□□□□ -1.47
EPHA3-201ENST00000336596 PYGO2Q9BRQ0 406 aa5.88□□□□□ -1.47
EPHA3-201ENST00000336596 IGHV1-24A0A0C4DH33 117 aa5.88□□□□□ -1.47
EPHA3-201ENST00000336596 H7C2G1 150 aa5.88□□□□□ -1.47
EPHA3-201ENST00000336596 C10orf126Q8N4M7 172 aa5.88□□□□□ -1.47
EPHA3-201ENST00000336596 NPBQ8NG41 125 aa5.88□□□□□ -1.47
EPHA3-201ENST00000336596 SMIM13P0DJ93 91 aa5.88□□□□□ -1.47
EPHA3-201ENST00000336596 IGF2RP11717 2491 aa5.88□□□□□ -1.47
EPHA3-201ENST00000336596 IGKV1D-13A0A0B4J2D9 117 aa5.88□□□□□ -1.47
EPHA3-201ENST00000336596 IGHV4-61A0A0C4DH41 118 aa5.88□□□□□ -1.47
EPHA3-201ENST00000336596 FSTL3O95633 263 aa5.88□□□□□ -1.47
EPHA3-201ENST00000336596 IGKV1-13P0DP09 117 aa5.88□□□□□ -1.47
EPHA3-201ENST00000336596 LY6G5BQ8NDX9 201 aa5.88□□□□□ -1.47
EPHA3-201ENST00000336596 UQCR10Q9UDW1 63 aa5.88□□□□□ -1.47
EPHA3-201ENST00000336596 LENEPQ9Y5L5 61 aa5.88□□□□□ -1.47
EPHA3-201ENST00000336596 TCRAP04437 139 aa5.87□□□□□ -1.47
EPHA3-201ENST00000336596 RNASE2P10153 161 aaKnown RBP5.87□□□□□ -1.47
EPHA3-201ENST00000336596 GRNP28799 593 aaKnown RBP5.87□□□□□ -1.47
EPHA3-201ENST00000336596 IGHV3OR16-8A0A075B7F1 116 aa5.87□□□□□ -1.47
EPHA3-201ENST00000336596 ZNF134P52741 427 aa5.87□□□□□ -1.47
EPHA3-201ENST00000336596 TMEM88Q6PEY1 159 aa5.87□□□□□ -1.47
EPHA3-201ENST00000336596 CHAC1Q9BUX1 264 aa5.87□□□□□ -1.47
EPHA3-201ENST00000336596 XCL2Q9UBD3 114 aa5.87□□□□□ -1.47
EPHA3-201ENST00000336596 SCO2A0A1W2PP80 73 aa5.87□□□□□ -1.47
EPHA3-201ENST00000336596 GAGE10A6NGK3 116 aa5.87□□□□□ -1.47
EPHA3-201ENST00000336596 I3L3M4 83 aa5.87□□□□□ -1.47
EPHA3-201ENST00000336596 M0R2P5 195 aa5.87□□□□□ -1.47
EPHA3-201ENST00000336596 IGHV4-59P01825 116 aa5.87□□□□□ -1.47
EPHA3-201ENST00000336596 RNF144BQ7Z419 303 aa5.87□□□□□ -1.47
EPHA3-201ENST00000336596 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.87□□□□□ -1.47
EPHA3-201ENST00000336596 H3BQ85 93 aa5.87□□□□□ -1.47
EPHA3-201ENST00000336596 TREML4Q6UXN2 200 aa5.87□□□□□ -1.47
EPHA3-201ENST00000336596 Q8NA96 180 aa5.87□□□□□ -1.47
EPHA3-201ENST00000336596 PIFOQ8TCI5 191 aa5.87□□□□□ -1.47
EPHA3-201ENST00000336596 WIPF2Q8TF74 440 aaPredicted RBP5.87□□□□□ -1.47
EPHA3-201ENST00000336596 IGFBPL1Q8WX77 278 aa5.87□□□□□ -1.47
EPHA3-201ENST00000336596 DOCK10Q96BY6 2186 aa5.87□□□□□ -1.47
EPHA3-201ENST00000336596 RBAKDNA6NC62 111 aa5.87□□□□□ -1.47
EPHA3-201ENST00000336596 PMS2P5A8MQ11 134 aa5.87□□□□□ -1.47
EPHA3-201ENST00000336596 IGHV3-53P01767 116 aa5.87□□□□□ -1.47
EPHA3-201ENST00000336596 SNRPCP09234 159 aaKnown RBP5.87□□□□□ -1.47
EPHA3-201ENST00000336596 C5orf24Q7Z6I8 188 aa5.87□□□□□ -1.47
EPHA3-201ENST00000336596 RNF183Q96D59 192 aa5.87□□□□□ -1.47
EPHA3-201ENST00000336596 C1orf43Q9BWL3 253 aa5.87□□□□□ -1.47
EPHA3-201ENST00000336596 IGKV2-40A0A087WW87 121 aaPredicted RBP5.86□□□□□ -1.47
EPHA3-201ENST00000336596 K7EMT4 169 aa5.86□□□□□ -1.47
EPHA3-201ENST00000336596 SH2D1AO60880 128 aa5.86□□□□□ -1.47
EPHA3-201ENST00000336596 IGKV2D-40P01614 121 aaPredicted RBP5.86□□□□□ -1.47
EPHA3-201ENST00000336596 CD300CQ08708 224 aa5.86□□□□□ -1.47
EPHA3-201ENST00000336596 MBD6Q96DN6 1003 aa5.86□□□□□ -1.47
EPHA3-201ENST00000336596 SCRT1Q9BWW7 348 aa5.86□□□□□ -1.47
EPHA3-201ENST00000336596 CSTL1Q9H114 145 aa5.86□□□□□ -1.47
EPHA3-201ENST00000336596 LDLRAD4O15165 306 aa5.86□□□□□ -1.47
EPHA3-201ENST00000336596 MS4A6AQ9H2W1 248 aa5.86□□□□□ -1.47
EPHA3-201ENST00000336596 CENPVL3A0A0U1RRI6 287 aa5.86□□□□□ -1.47
EPHA3-201ENST00000336596 PGPEP1LA6NFU8 196 aa5.86□□□□□ -1.47
EPHA3-201ENST00000336596 NDPQ00604 133 aa5.86□□□□□ -1.47
EPHA3-201ENST00000336596 SPATA45Q537H7 98 aa5.86□□□□□ -1.47
EPHA3-201ENST00000336596 Q6ZR03 302 aa5.86□□□□□ -1.47
EPHA3-201ENST00000336596 HSPB9Q9BQS6 159 aa5.86□□□□□ -1.47
EPHA3-201ENST00000336596 C11orf68Q9H3H3 251 aaKnown RBP5.86□□□□□ -1.47
EPHA3-201ENST00000336596 NDUFA4L2Q9NRX3 87 aa5.86□□□□□ -1.47
EPHA3-201ENST00000336596 IGKV1D-8A0A087WSZ0 117 aa5.86□□□□□ -1.47
EPHA3-201ENST00000336596 HIGD1CA8MV81 97 aa5.86□□□□□ -1.47
EPHA3-201ENST00000336596 LHFPL4Q7Z7J7 247 aa5.86□□□□□ -1.47
EPHA3-201ENST00000336596 MBD3L1Q8WWY6 194 aa5.86□□□□□ -1.47
EPHA3-201ENST00000336596 MED13LQ71F56 2210 aa5.86□□□□□ -1.47
EPHA3-201ENST00000336596 SMIM6P0DI80 62 aa5.86□□□□□ -1.47
EPHA3-201ENST00000336596 FXYD7P58549 80 aa5.86□□□□□ -1.47
EPHA3-201ENST00000336596 NFE4Q86UQ8 179 aa5.86□□□□□ -1.47
EPHA3-201ENST00000336596 LURAP1LQ8IV03 231 aa5.86□□□□□ -1.47
EPHA3-201ENST00000336596 ZNF492Q9P255 531 aa5.86□□□□□ -1.47
EPHA3-201ENST00000336596 TRAV8-1A0A0A6YYK1 113 aa5.85□□□□□ -1.47
EPHA3-201ENST00000336596 F8W735 103 aaPredicted RBP5.85□□□□□ -1.47
EPHA3-201ENST00000336596 RPL32P62910 135 aaKnown RBP5.85□□□□□ -1.47
EPHA3-201ENST00000336596 TMEM126AQ9H061 195 aa5.85□□□□□ -1.47
EPHA3-201ENST00000336596 AURKAIP1Q9NWT8 199 aaPredicted RBP5.85□□□□□ -1.47
EPHA3-201ENST00000336596 A8MXK9 166 aa5.85□□□□□ -1.47
EPHA3-201ENST00000336596 TNFRSF13BO14836 293 aaPredicted RBP5.85□□□□□ -1.47
EPHA3-201ENST00000336596 GAGE12BA1L429 117 aa5.85□□□□□ -1.47
EPHA3-201ENST00000336596 FAM231BA6NCW3 169 aa5.85□□□□□ -1.47
EPHA3-201ENST00000336596 GAGE7O76087 117 aa5.85□□□□□ -1.47
EPHA3-201ENST00000336596 GAGE12FP0CL80 117 aa5.85□□□□□ -1.47
EPHA3-201ENST00000336596 GAGE12GP0CL81 117 aa5.85□□□□□ -1.47
EPHA3-201ENST00000336596 GAGE12IP0CL82 117 aa5.85□□□□□ -1.47
EPHA3-201ENST00000336596 GNG5P63218 68 aa5.85□□□□□ -1.47
EPHA3-201ENST00000336596 RSPO1Q2MKA7 263 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms