RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 ATP6V0BQ99437 205 aa12.94□□□□□ -0.34
TMEM39B-201ENST00000336294 SMAD5-AS1Q9Y6J3 95 aa12.94□□□□□ -0.34
TMEM39B-201ENST00000336294 ABCA2Q9BZC7 2435 aa12.94□□□□□ -0.34
TMEM39B-201ENST00000336294 FBLL1A6NHQ2 334 aaKnown RBP12.93□□□□□ -0.34
TMEM39B-201ENST00000336294 FAM223BA6NKX1 122 aa12.93□□□□□ -0.34
TMEM39B-201ENST00000336294 B4DSR2 109 aa12.93□□□□□ -0.34
TMEM39B-201ENST00000336294 DMRTA1Q5VZB9 504 aa12.93□□□□□ -0.34
TMEM39B-201ENST00000336294 Q71RC1 249 aaPredicted RBP12.93□□□□□ -0.34
TMEM39B-201ENST00000336294 FAM223AQ8IWN6 122 aa12.93□□□□□ -0.34
TMEM39B-201ENST00000336294 BORCS7Q96B45 105 aa12.93□□□□□ -0.34
TMEM39B-201ENST00000336294 ALKBH7Q9BT30 221 aaPredicted RBP12.93□□□□□ -0.34
TMEM39B-201ENST00000336294 AKAP6Q13023 2319 aa12.93□□□□□ -0.34
TMEM39B-201ENST00000336294 IGHV3OR16-8A0A075B7F1 116 aa12.92□□□□□ -0.34
TMEM39B-201ENST00000336294 RELQ04864 619 aaPredicted RBP12.92□□□□□ -0.34
TMEM39B-201ENST00000336294 ZNF785A8K8V0 405 aa12.92□□□□□ -0.34
TMEM39B-201ENST00000336294 CT45A10P0DMU9 189 aa12.92□□□□□ -0.34
TMEM39B-201ENST00000336294 SLC25A16P16260 332 aa12.92□□□□□ -0.34
TMEM39B-201ENST00000336294 CD33P20138 364 aa12.92□□□□□ -0.34
TMEM39B-201ENST00000336294 ZNF705AQ6ZN79 300 aaPredicted RBP12.92□□□□□ -0.34
TMEM39B-201ENST00000336294 HIF1ANQ9NWT6 349 aa12.92□□□□□ -0.34
TMEM39B-201ENST00000336294 PAM16Q9Y3D7 125 aa12.92□□□□□ -0.34
TMEM39B-201ENST00000336294 RNF114Q9Y508 228 aa12.92□□□□□ -0.34
TMEM39B-201ENST00000336294 GCN1Q92616 2671 aaKnown RBP12.91□□□□□ -0.34
TMEM39B-201ENST00000336294 A0A087X0K7 114 aa12.91□□□□□ -0.34
TMEM39B-201ENST00000336294 A6NDX4 124 aa12.91□□□□□ -0.34
TMEM39B-201ENST00000336294 BUB3O43684 328 aa12.91□□□□□ -0.34
TMEM39B-201ENST00000336294 COX6B1P14854 86 aa12.91□□□□□ -0.34
TMEM39B-201ENST00000336294 GATA3P23771 443 aa12.91□□□□□ -0.34
TMEM39B-201ENST00000336294 CTRLP40313 264 aa12.91□□□□□ -0.34
TMEM39B-201ENST00000336294 PMCHL1Q16048 86 aa12.91□□□□□ -0.34
TMEM39B-201ENST00000336294 ZNF843Q8N446 348 aa12.91□□□□□ -0.34
TMEM39B-201ENST00000336294 SSBP4Q9BWG4 385 aaPredicted RBP12.91□□□□□ -0.34
TMEM39B-201ENST00000336294 ZNF462Q96JM2 2506 aa12.9□□□□□ -0.34
TMEM39B-201ENST00000336294 H3BUX3 64 aa12.9□□□□□ -0.34
TMEM39B-201ENST00000336294 CHEK1O14757 476 aa12.9□□□□□ -0.34
TMEM39B-201ENST00000336294 HSBP1O75506 76 aa12.9□□□□□ -0.34
TMEM39B-201ENST00000336294 IGF1P05019 195 aa12.9□□□□□ -0.34
TMEM39B-201ENST00000336294 C3orf79P0CE67 100 aa12.9□□□□□ -0.34
TMEM39B-201ENST00000336294 FOXA3P55318 350 aaPredicted RBP12.9□□□□□ -0.34
TMEM39B-201ENST00000336294 LY6EQ16553 131 aa12.9□□□□□ -0.34
TMEM39B-201ENST00000336294 NRGNQ92686 78 aa12.9□□□□□ -0.34
TMEM39B-201ENST00000336294 ASCL2Q99929 193 aa12.9□□□□□ -0.34
TMEM39B-201ENST00000336294 DOPEY1Q5JWR5 2465 aa12.9□□□□□ -0.34
TMEM39B-201ENST00000336294 IGKV2-40A0A087WW87 121 aaPredicted RBP12.9□□□□□ -0.34
TMEM39B-201ENST00000336294 CLPSL1A2RUU4 121 aa12.9□□□□□ -0.34
TMEM39B-201ENST00000336294 IGKV2D-40P01614 121 aaPredicted RBP12.9□□□□□ -0.34
TMEM39B-201ENST00000336294 TRGV3P03979 118 aa12.9□□□□□ -0.34
TMEM39B-201ENST00000336294 PRB4P10163 310 aaPredicted RBP12.9□□□□□ -0.34
TMEM39B-201ENST00000336294 SAPCD1Q5SSQ6 148 aa12.9□□□□□ -0.34
TMEM39B-201ENST00000336294 C8orf49Q96NF6 230 aa12.9□□□□□ -0.34
TMEM39B-201ENST00000336294 METTL26Q96S19 204 aa12.9□□□□□ -0.34
TMEM39B-201ENST00000336294 LINC00527Q9UJ94 153 aa12.9□□□□□ -0.34
TMEM39B-201ENST00000336294 C20orf202A1L168 122 aa12.89□□□□□ -0.35
TMEM39B-201ENST00000336294 HAX1O00165 279 aa12.89□□□□□ -0.35
TMEM39B-201ENST00000336294 TCAPO15273 167 aa12.89□□□□□ -0.35
TMEM39B-201ENST00000336294 CRIP1P50238 77 aa12.89□□□□□ -0.35
TMEM39B-201ENST00000336294 TDRG1Q3Y452 100 aa12.89□□□□□ -0.35
TMEM39B-201ENST00000336294 KLHDC1Q8N7A1 406 aa12.89□□□□□ -0.35
TMEM39B-201ENST00000336294 IGHG2P01859 326 aa12.88□□□□□ -0.35
TMEM39B-201ENST00000336294 Q6AWC8 147 aa12.88□□□□□ -0.35
TMEM39B-201ENST00000336294 COX8CQ7Z4L0 72 aa12.88□□□□□ -0.35
TMEM39B-201ENST00000336294 CHCHD1Q96BP2 118 aaKnown RBP12.88□□□□□ -0.35
TMEM39B-201ENST00000336294 SLC50A1Q9BRV3 221 aa12.88□□□□□ -0.35
TMEM39B-201ENST00000336294 UQCR10Q9UDW1 63 aa12.88□□□□□ -0.35
TMEM39B-201ENST00000336294 USP9XQ93008 2570 aaPredicted RBP12.88□□□□□ -0.35
TMEM39B-201ENST00000336294 H3BUA1 57 aa12.88□□□□□ -0.35
TMEM39B-201ENST00000336294 BRI3O95415 125 aa12.88□□□□□ -0.35
TMEM39B-201ENST00000336294 RPLP1P05386 114 aaKnown RBP12.88□□□□□ -0.35
TMEM39B-201ENST00000336294 SPATA45Q537H7 98 aa12.88□□□□□ -0.35
TMEM39B-201ENST00000336294 IGHG4P01861 327 aa12.87□□□□□ -0.35
TMEM39B-201ENST00000336294 APOHP02749 345 aaPredicted RBP12.87□□□□□ -0.35
TMEM39B-201ENST00000336294 NTF3P20783 257 aa12.87□□□□□ -0.35
TMEM39B-201ENST00000336294 LCN12Q6JVE5 192 aa12.87□□□□□ -0.35
TMEM39B-201ENST00000336294 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.87□□□□□ -0.35
TMEM39B-201ENST00000336294 GATD1Q8NB37 220 aa12.87□□□□□ -0.35
TMEM39B-201ENST00000336294 PRR25Q96S07 402 aa12.87□□□□□ -0.35
TMEM39B-201ENST00000336294 A0A1B0GUT8 65 aa12.86□□□□□ -0.35
TMEM39B-201ENST00000336294 A0A1B0GW15 77 aa12.86□□□□□ -0.35
TMEM39B-201ENST00000336294 FAM181BA6NEQ2 426 aa12.86□□□□□ -0.35
TMEM39B-201ENST00000336294 M0R2Z0 102 aa12.86□□□□□ -0.35
TMEM39B-201ENST00000336294 HLA-DMBP28068 263 aa12.86□□□□□ -0.35
TMEM39B-201ENST00000336294 RIGQ13278 110 aa12.86□□□□□ -0.35
TMEM39B-201ENST00000336294 IGFL4Q6B9Z1 124 aa12.86□□□□□ -0.35
TMEM39B-201ENST00000336294 LINC01356Q8N9X3 169 aa12.86□□□□□ -0.35
TMEM39B-201ENST00000336294 MYO18BQ8IUG5 2567 aa12.86□□□□□ -0.35
TMEM39B-201ENST00000336294 IGHV3-66A0A0C4DH42 116 aa12.85□□□□□ -0.35
TMEM39B-201ENST00000336294 SH2D1AO60880 128 aa12.85□□□□□ -0.35
TMEM39B-201ENST00000336294 AVPP01185 164 aa12.85□□□□□ -0.35
TMEM39B-201ENST00000336294 ARL3P36405 182 aa12.85□□□□□ -0.35
TMEM39B-201ENST00000336294 FAM19A2Q8N3H0 131 aa12.85□□□□□ -0.35
TMEM39B-201ENST00000336294 NDFIP1Q9BT67 221 aa12.85□□□□□ -0.35
TMEM39B-201ENST00000336294 U3KQE9 123 aa12.85□□□□□ -0.35
TMEM39B-201ENST00000336294 UTP20O75691 2785 aaKnown RBP12.85□□□□□ -0.35
TMEM39B-201ENST00000336294 ASH1LQ9NR48 2969 aaKnown RBP12.85□□□□□ -0.35
TMEM39B-201ENST00000336294 TMEM189A5PLL7 270 aa12.85□□□□□ -0.35
TMEM39B-201ENST00000336294 BTF3P20290 206 aaKnown RBP12.85□□□□□ -0.35
TMEM39B-201ENST00000336294 PPIFP30405 207 aaKnown RBP12.85□□□□□ -0.35
TMEM39B-201ENST00000336294 RNASEKQ6P5S7 137 aaKnown RBP12.85□□□□□ -0.35
TMEM39B-201ENST00000336294 USMG5Q96IX5 58 aa12.85□□□□□ -0.35
TMEM39B-201ENST00000336294 VGLL1Q99990 258 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms