RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 PMS2P11Q13670 270 aa10.2□□□□□ -0.78
TUBA1B-202ENST00000336023 KPRPQ5T749 579 aaPredicted RBP10.2□□□□□ -0.78
TUBA1B-202ENST00000336023 CST9LP1Q5W188 147 aa10.2□□□□□ -0.78
TUBA1B-202ENST00000336023 ZNF738Q8NE65 137 aa10.2□□□□□ -0.78
TUBA1B-202ENST00000336023 FAM110AQ9BQ89 295 aa10.2□□□□□ -0.78
TUBA1B-202ENST00000336023 MANBALQ9NQG1 85 aa10.2□□□□□ -0.78
TUBA1B-202ENST00000336023 PRELID1Q9Y255 219 aa10.2□□□□□ -0.78
TUBA1B-202ENST00000336023 DEFB1P60022 68 aa10.19□□□□□ -0.78
TUBA1B-202ENST00000336023 APRG1Q8IVJ8 170 aa10.19□□□□□ -0.78
TUBA1B-202ENST00000336023 Q8N1Y9 231 aa10.19□□□□□ -0.78
TUBA1B-202ENST00000336023 RPUSD4Q96CM3 377 aaKnown RBP10.19□□□□□ -0.78
TUBA1B-202ENST00000336023 WFDC10AQ9H1F0 79 aa10.19□□□□□ -0.78
TUBA1B-202ENST00000336023 ARL2-SNX15V9GYD0 113 aa10.19□□□□□ -0.78
TUBA1B-202ENST00000336023 IFNA1P01562 189 aa10.18□□□□□ -0.78
TUBA1B-202ENST00000336023 ZNF124Q15973 351 aa10.18□□□□□ -0.78
TUBA1B-202ENST00000336023 CLLU1Q5K131 121 aa10.18□□□□□ -0.78
TUBA1B-202ENST00000336023 MRPL53Q96EL3 112 aaKnown RBP10.18□□□□□ -0.78
TUBA1B-202ENST00000336023 NKX6-2Q9C056 277 aaPredicted RBP10.18□□□□□ -0.78
TUBA1B-202ENST00000336023 PRAC2D3DTV9 90 aa10.18□□□□□ -0.78
TUBA1B-202ENST00000336023 SLC25A5P05141 298 aaKnown RBP10.18□□□□□ -0.78
TUBA1B-202ENST00000336023 CSN1S1P47710 185 aa10.18□□□□□ -0.78
TUBA1B-202ENST00000336023 HAGHQ16775 308 aa10.18□□□□□ -0.78
TUBA1B-202ENST00000336023 CMTM2Q8TAZ6 248 aa10.18□□□□□ -0.78
TUBA1B-202ENST00000336023 RXFP4Q8TDU9 374 aa10.18□□□□□ -0.78
TUBA1B-202ENST00000336023 KNCNA6PVL3 124 aa10.17□□□□□ -0.78
TUBA1B-202ENST00000336023 F6UB75 175 aa10.17□□□□□ -0.78
TUBA1B-202ENST00000336023 BCL2P10415 239 aa10.17□□□□□ -0.78
TUBA1B-202ENST00000336023 ATP5G3P48201 142 aa10.17□□□□□ -0.78
TUBA1B-202ENST00000336023 CCDC28AQ8IWP9 274 aa10.17□□□□□ -0.78
TUBA1B-202ENST00000336023 DEFB125Q8N687 156 aa10.17□□□□□ -0.78
TUBA1B-202ENST00000336023 C5orf17Q8NAS9 161 aa10.17□□□□□ -0.78
TUBA1B-202ENST00000336023 C11orf94C9JXX5 98 aa10.16□□□□□ -0.78
TUBA1B-202ENST00000336023 PRB2P02812 416 aaPredicted RBP10.16□□□□□ -0.78
TUBA1B-202ENST00000336023 TAGLN2P37802 199 aaKnown RBP10.16□□□□□ -0.78
TUBA1B-202ENST00000336023 GNG5P63218 68 aa10.16□□□□□ -0.78
TUBA1B-202ENST00000336023 ACTL10Q5JWF8 245 aa10.16□□□□□ -0.78
TUBA1B-202ENST00000336023 GDF5OSQ5U4N7 250 aa10.16□□□□□ -0.78
TUBA1B-202ENST00000336023 EBLN2Q6P2I7 272 aa10.16□□□□□ -0.78
TUBA1B-202ENST00000336023 FOXI2Q6ZQN5 318 aa10.16□□□□□ -0.78
TUBA1B-202ENST00000336023 SAV1Q9H4B6 383 aaPredicted RBP10.16□□□□□ -0.78
TUBA1B-202ENST00000336023 EPDR1Q9UM22 224 aa10.16□□□□□ -0.78
TUBA1B-202ENST00000336023 RPH3ALQ9UNE2 315 aa10.16□□□□□ -0.78
TUBA1B-202ENST00000336023 RBFOX3A6NFN3 312 aa10.15□□□□□ -0.78
TUBA1B-202ENST00000336023 DIRC3C9JPN6 131 aa10.15□□□□□ -0.78
TUBA1B-202ENST00000336023 ZNF705DP0CH99 300 aaPredicted RBP10.15□□□□□ -0.78
TUBA1B-202ENST00000336023 ZNF705BP0CI00 300 aaPredicted RBP10.15□□□□□ -0.78
TUBA1B-202ENST00000336023 ARL6IP6Q8N6S5 226 aa10.15□□□□□ -0.78
TUBA1B-202ENST00000336023 OR8A1Q8NGG7 326 aa10.15□□□□□ -0.78
TUBA1B-202ENST00000336023 CITED4Q96RK1 184 aa10.15□□□□□ -0.78
TUBA1B-202ENST00000336023 RARRES2Q99969 163 aa10.15□□□□□ -0.78
TUBA1B-202ENST00000336023 VAX2Q9UIW0 290 aa10.15□□□□□ -0.78
TUBA1B-202ENST00000336023 IGKV2-40A0A087WW87 121 aaPredicted RBP10.15□□□□□ -0.79
TUBA1B-202ENST00000336023 A0A0J9YX75 114 aa10.15□□□□□ -0.79
TUBA1B-202ENST00000336023 LOC102723971A0A1B0GUV8 181 aa10.15□□□□□ -0.79
TUBA1B-202ENST00000336023 IGKV2D-40P01614 121 aaPredicted RBP10.15□□□□□ -0.79
TUBA1B-202ENST00000336023 MEF2BQ02080 365 aaPredicted RBP10.15□□□□□ -0.79
TUBA1B-202ENST00000336023 HIST1H1AQ02539 215 aaPredicted RBP10.15□□□□□ -0.79
TUBA1B-202ENST00000336023 TXNDC17Q9BRA2 123 aa10.15□□□□□ -0.79
TUBA1B-202ENST00000336023 AURKAIP1Q9NWT8 199 aaPredicted RBP10.15□□□□□ -0.79
TUBA1B-202ENST00000336023 H3BMM0 161 aa10.14□□□□□ -0.79
TUBA1B-202ENST00000336023 TCRAP04437 139 aa10.14□□□□□ -0.79
TUBA1B-202ENST00000336023 HLA-DRB4P13762 266 aa10.14□□□□□ -0.79
TUBA1B-202ENST00000336023 TOR2AQ5JU69 321 aa10.14□□□□□ -0.79
TUBA1B-202ENST00000336023 GOLT1AQ6ZVE7 132 aa10.14□□□□□ -0.79
TUBA1B-202ENST00000336023 STHQ8IWL8 128 aa10.14□□□□□ -0.79
TUBA1B-202ENST00000336023 OR10J6PQ8NGY7 276 aa10.14□□□□□ -0.79
TUBA1B-202ENST00000336023 TCEAL7Q9BRU2 100 aa10.14□□□□□ -0.79
TUBA1B-202ENST00000336023 EIF5A2Q9GZV4 153 aaKnown RBP10.14□□□□□ -0.79
TUBA1B-202ENST00000336023 SRD5A3Q9H8P0 318 aa10.14□□□□□ -0.79
TUBA1B-202ENST00000336023 HLA-DRB4X5D2U9 266 aa10.14□□□□□ -0.79
TUBA1B-202ENST00000336023 PEX7O00628 323 aa10.13□□□□□ -0.79
TUBA1B-202ENST00000336023 CNN1P51911 297 aaKnown RBP10.13□□□□□ -0.79
TUBA1B-202ENST00000336023 ERCC8Q13216 396 aa10.13□□□□□ -0.79
TUBA1B-202ENST00000336023 ZNF506Q5JVG8 444 aa10.13□□□□□ -0.79
TUBA1B-202ENST00000336023 SLC7A5P1Q8MH63 180 aa10.13□□□□□ -0.79
TUBA1B-202ENST00000336023 OR4B1Q8NGF8 309 aa10.13□□□□□ -0.79
TUBA1B-202ENST00000336023 HIST1H2BAQ96A08 127 aa10.13□□□□□ -0.79
TUBA1B-202ENST00000336023 VGLL1Q99990 258 aa10.13□□□□□ -0.79
TUBA1B-202ENST00000336023 ATG101Q9BSB4 218 aa10.13□□□□□ -0.79
TUBA1B-202ENST00000336023 TUBA4BQ9H853 241 aa10.13□□□□□ -0.79
TUBA1B-202ENST00000336023 SCO2A0A1W2PP80 73 aa10.12□□□□□ -0.79
TUBA1B-202ENST00000336023 RBAKDNA6NC62 111 aa10.12□□□□□ -0.79
TUBA1B-202ENST00000336023 F6UZH7 168 aa10.12□□□□□ -0.79
TUBA1B-202ENST00000336023 DUSP14O95147 198 aaKnown RBP10.12□□□□□ -0.79
TUBA1B-202ENST00000336023 IGKV3-20P01619 116 aa10.12□□□□□ -0.79
TUBA1B-202ENST00000336023 IGHV4-30-4P0DP06 118 aa10.12□□□□□ -0.79
TUBA1B-202ENST00000336023 CYB561D1Q8N8Q1 229 aa10.12□□□□□ -0.79
TUBA1B-202ENST00000336023 SERTM2A0A1B0GWG4 89 aa10.11□□□□□ -0.79
TUBA1B-202ENST00000336023 NPIPB6E9PJ23 425 aa10.11□□□□□ -0.79
TUBA1B-202ENST00000336023 K7EQM0 130 aa10.11□□□□□ -0.79
TUBA1B-202ENST00000336023 PDE6DO43924 150 aa10.11□□□□□ -0.79
TUBA1B-202ENST00000336023 C9orf47Q6ZRZ4 202 aa10.11□□□□□ -0.79
TUBA1B-202ENST00000336023 TRPT1Q86TN4 253 aaKnown RBP10.11□□□□□ -0.79
TUBA1B-202ENST00000336023 LINC00479Q96M42 142 aa10.11□□□□□ -0.79
TUBA1B-202ENST00000336023 AGPAT4-IT1Q9H0P7 198 aa10.11□□□□□ -0.79
TUBA1B-202ENST00000336023 AGRNO00468 2067 aa10.11□□□□□ -0.79
TUBA1B-202ENST00000336023 TRAV8-1A0A0A6YYK1 113 aa10.11□□□□□ -0.79
TUBA1B-202ENST00000336023 K7EIL1 84 aa10.11□□□□□ -0.79
TUBA1B-202ENST00000336023 RPL35AP18077 110 aaKnown RBP10.11□□□□□ -0.79
TUBA1B-202ENST00000336023 SGK494Q96LW2 274 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms