RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 IGHV1-3A0A0C4DH29 117 aa11.3□□□□□ -0.6
EPHB3-201ENST00000330394 TMEM8BA6NDV4 472 aa11.3□□□□□ -0.6
EPHB3-201ENST00000330394 B9A039 149 aa11.3□□□□□ -0.6
EPHB3-201ENST00000330394 LAGE3Q14657 143 aa11.3□□□□□ -0.6
EPHB3-201ENST00000330394 SIGLEC8Q9NYZ4 499 aa11.3□□□□□ -0.6
EPHB3-201ENST00000330394 IGHV3OR16-12A0A075B7B8 117 aa11.29□□□□□ -0.6
EPHB3-201ENST00000330394 A0A0U1RRA0 63 aa11.29□□□□□ -0.6
EPHB3-201ENST00000330394 K7EMI3 77 aa11.29□□□□□ -0.6
EPHB3-201ENST00000330394 ID1P41134 155 aa11.29□□□□□ -0.6
EPHB3-201ENST00000330394 EEF1AKMT3Q96AZ1 226 aa11.29□□□□□ -0.6
EPHB3-201ENST00000330394 DKK2Q9UBU2 259 aa11.29□□□□□ -0.6
EPHB3-201ENST00000330394 IGKV3D-20A0A0C4DH25 116 aa11.29□□□□□ -0.6
EPHB3-201ENST00000330394 TMEM249Q2WGJ8 235 aa11.29□□□□□ -0.6
EPHB3-201ENST00000330394 NOTCH2Q04721 2471 aa11.29□□□□□ -0.6
EPHB3-201ENST00000330394 TSPAN13O95857 204 aa11.29□□□□□ -0.6
EPHB3-201ENST00000330394 SPINK8P0C7L1 97 aa11.29□□□□□ -0.6
EPHB3-201ENST00000330394 GEMIN7Q9H840 131 aaKnown RBP11.29□□□□□ -0.6
EPHB3-201ENST00000330394 TMEM238C9JI98 176 aa11.28□□□□□ -0.6
EPHB3-201ENST00000330394 K7EP34 96 aa11.28□□□□□ -0.6
EPHB3-201ENST00000330394 LY6HO94772 140 aa11.28□□□□□ -0.6
EPHB3-201ENST00000330394 ERCC8Q13216 396 aa11.28□□□□□ -0.6
EPHB3-201ENST00000330394 KLRD1Q13241 179 aa11.28□□□□□ -0.6
EPHB3-201ENST00000330394 FAM104BQ5XKR9 115 aa11.28□□□□□ -0.6
EPHB3-201ENST00000330394 MRAP2Q96G30 205 aa11.28□□□□□ -0.6
EPHB3-201ENST00000330394 COL4A4P53420 1690 aaPredicted RBP11.28□□□□□ -0.6
EPHB3-201ENST00000330394 TRAV12-3A0A0B4J271 114 aa11.28□□□□□ -0.6
EPHB3-201ENST00000330394 SRD5A1P18405 259 aa11.28□□□□□ -0.6
EPHB3-201ENST00000330394 KLRB1Q12918 225 aa11.28□□□□□ -0.6
EPHB3-201ENST00000330394 TTTY13Q9BZ97 58 aa11.28□□□□□ -0.6
EPHB3-201ENST00000330394 IGKV3OR2-268A0A0C4DH90 116 aa11.28□□□□□ -0.6
EPHB3-201ENST00000330394 TNFRSF6BO95407 300 aa11.28□□□□□ -0.6
EPHB3-201ENST00000330394 COL8A2P25067 703 aa11.28□□□□□ -0.6
EPHB3-201ENST00000330394 TMEM95Q3KNT9 176 aa11.28□□□□□ -0.6
EPHB3-201ENST00000330394 ANKRD39Q53RE8 183 aa11.28□□□□□ -0.6
EPHB3-201ENST00000330394 C17orf77Q96MU5 243 aa11.28□□□□□ -0.6
EPHB3-201ENST00000330394 ZNF747Q9BV97 191 aa11.28□□□□□ -0.6
EPHB3-201ENST00000330394 CEACAM4O75871 244 aa11.27□□□□□ -0.6
EPHB3-201ENST00000330394 DKK1O94907 266 aa11.27□□□□□ -0.6
EPHB3-201ENST00000330394 IGKV1OR2-108A0A075B7D4 117 aa11.27□□□□□ -0.61
EPHB3-201ENST00000330394 A0A1W2PPM0 123 aa11.27□□□□□ -0.61
EPHB3-201ENST00000330394 AZU1P20160 251 aa11.27□□□□□ -0.61
EPHB3-201ENST00000330394 MRPL51Q4U2R6 128 aaKnown RBP11.27□□□□□ -0.61
EPHB3-201ENST00000330394 ZNF474Q6S9Z5 364 aaPredicted RBP11.27□□□□□ -0.61
EPHB3-201ENST00000330394 C11orf53Q8IXP5 236 aa11.27□□□□□ -0.61
EPHB3-201ENST00000330394 TMEM75Q8N9X5 138 aa11.27□□□□□ -0.61
EPHB3-201ENST00000330394 GFRA4Q9GZZ7 299 aa11.27□□□□□ -0.61
EPHB3-201ENST00000330394 NPYP01303 97 aa11.27□□□□□ -0.61
EPHB3-201ENST00000330394 NDPQ00604 133 aa11.27□□□□□ -0.61
EPHB3-201ENST00000330394 RNF138Q8WVD3 245 aa11.27□□□□□ -0.61
EPHB3-201ENST00000330394 ZNF492Q9P255 531 aa11.27□□□□□ -0.61
EPHB3-201ENST00000330394 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.27□□□□□ -0.61
EPHB3-201ENST00000330394 TMEM178BH3BS89 294 aa11.27□□□□□ -0.61
EPHB3-201ENST00000330394 MEIG1Q5JSS6 88 aa11.27□□□□□ -0.61
EPHB3-201ENST00000330394 FAM120AOSQ5T036 256 aa11.27□□□□□ -0.61
EPHB3-201ENST00000330394 C14orf178Q8N769 122 aaPredicted RBP11.27□□□□□ -0.61
EPHB3-201ENST00000330394 SYT8Q8NBV8 401 aa11.27□□□□□ -0.61
EPHB3-201ENST00000330394 NPIPB6E9PJ23 425 aa11.26□□□□□ -0.61
EPHB3-201ENST00000330394 TAX1BP3O14907 124 aa11.26□□□□□ -0.61
EPHB3-201ENST00000330394 RAX2Q96IS3 184 aa11.26□□□□□ -0.61
EPHB3-201ENST00000330394 SMPXQ9UHP9 88 aa11.26□□□□□ -0.61
EPHB3-201ENST00000330394 CT83Q5H943 113 aa11.26□□□□□ -0.61
EPHB3-201ENST00000330394 TEX48A0A1B0GUV7 120 aa11.26□□□□□ -0.61
EPHB3-201ENST00000330394 C15orf32Q32M92 178 aa11.26□□□□□ -0.61
EPHB3-201ENST00000330394 ORMDL2Q53FV1 153 aa11.26□□□□□ -0.61
EPHB3-201ENST00000330394 Q8TCH9 128 aa11.26□□□□□ -0.61
EPHB3-201ENST00000330394 CD7P09564 240 aa11.25□□□□□ -0.61
EPHB3-201ENST00000330394 NPC2P61916 151 aa11.25□□□□□ -0.61
EPHB3-201ENST00000330394 GAGE2BQ13066 116 aa11.25□□□□□ -0.61
EPHB3-201ENST00000330394 GAGE2EQ4V326 116 aa11.25□□□□□ -0.61
EPHB3-201ENST00000330394 GAGE2DQ9UEU5 116 aa11.25□□□□□ -0.61
EPHB3-201ENST00000330394 DLX4Q92988 240 aaPredicted RBP11.25□□□□□ -0.61
EPHB3-201ENST00000330394 C2orf16Q68DN1 1984 aa11.25□□□□□ -0.61
EPHB3-201ENST00000330394 TP53TG3Q9ULZ0 132 aa11.25□□□□□ -0.61
EPHB3-201ENST00000330394 SUMO2P61956 95 aaKnown RBP11.24□□□□□ -0.61
EPHB3-201ENST00000330394 SH2D6Q7Z4S9 175 aa11.24□□□□□ -0.61
EPHB3-201ENST00000330394 SHANK2-AS3Q9BTD1 123 aa11.24□□□□□ -0.61
EPHB3-201ENST00000330394 CSTL1Q9H114 145 aa11.24□□□□□ -0.61
EPHB3-201ENST00000330394 TRBV19A0A075B6N1 114 aa11.24□□□□□ -0.61
EPHB3-201ENST00000330394 RNASE1P07998 156 aaKnown RBP11.24□□□□□ -0.61
EPHB3-201ENST00000330394 C10orf126Q8N4M7 172 aa11.24□□□□□ -0.61
EPHB3-201ENST00000330394 MRPL35Q9NZE8 188 aaKnown RBP11.24□□□□□ -0.61
EPHB3-201ENST00000330394 TRAV26-2A0A0B4J265 109 aa11.24□□□□□ -0.61
EPHB3-201ENST00000330394 SPRNQ5BIV9 151 aa11.24□□□□□ -0.61
EPHB3-201ENST00000330394 RNF182Q8N6D2 247 aa11.24□□□□□ -0.61
EPHB3-201ENST00000330394 ABHD17AQ96GS6 310 aa11.24□□□□□ -0.61
EPHB3-201ENST00000330394 KIAA1549LQ6ZVL6 1849 aa11.24□□□□□ -0.61
EPHB3-201ENST00000330394 GAGE12HA6NDE8 117 aa11.24□□□□□ -0.61
EPHB3-201ENST00000330394 HAX1O00165 279 aa11.24□□□□□ -0.61
EPHB3-201ENST00000330394 SLC50A1Q9BRV3 221 aa11.24□□□□□ -0.61
EPHB3-201ENST00000330394 KIAA1549Q9HCM3 1950 aa11.24□□□□□ -0.61
EPHB3-201ENST00000330394 SCGB1A1P11684 91 aa11.23□□□□□ -0.61
EPHB3-201ENST00000330394 FAM57AQ8TBR7 257 aa11.23□□□□□ -0.61
EPHB3-201ENST00000330394 RNF114Q9Y508 228 aa11.23□□□□□ -0.61
EPHB3-201ENST00000330394 EFNA4P52798 201 aa11.23□□□□□ -0.61
EPHB3-201ENST00000330394 LINC01549A6NIU2 74 aa11.23□□□□□ -0.61
EPHB3-201ENST00000330394 LGALS9BQ3B8N2 356 aa11.23□□□□□ -0.61
EPHB3-201ENST00000330394 LGALS9CQ6DKI2 356 aa11.23□□□□□ -0.61
EPHB3-201ENST00000330394 ZFAND6Q6FIF0 208 aa11.23□□□□□ -0.61
EPHB3-201ENST00000330394 PATE2Q6UY27 113 aa11.23□□□□□ -0.61
EPHB3-201ENST00000330394 VCX2Q9H322 139 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms