RNA–Protein interactions for RNA: ENST00000330331.9

RGPD6-202, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2 BASIC

Gene RGPD6, Length 2,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-202ENST00000330331 GAGE5Q13069 117 aa12□□□□□ -0.49
RGPD6-202ENST00000330331 GAGE6Q13070 117 aa12□□□□□ -0.49
RGPD6-202ENST00000330331 PIP4P1Q86T03 277 aa12□□□□□ -0.49
RGPD6-202ENST00000330331 MOGAT3Q86VF5 341 aa12□□□□□ -0.49
RGPD6-202ENST00000330331 C6orf15Q6UXA7 325 aaPredicted RBP12□□□□□ -0.49
RGPD6-202ENST00000330331 FAM90A27PA6NNH2 459 aa11.99□□□□□ -0.49
RGPD6-202ENST00000330331 RITA1Q96K30 269 aa11.99□□□□□ -0.49
RGPD6-202ENST00000330331 ASPMQ8IZT6 3477 aa11.99□□□□□ -0.49
RGPD6-202ENST00000330331 EVI2AP22794 236 aa11.99□□□□□ -0.49
RGPD6-202ENST00000330331 HERV-K104P63124 156 aa11.99□□□□□ -0.49
RGPD6-202ENST00000330331 MBNL2Q5VZF2 373 aaKnown RBP11.99□□□□□ -0.49
RGPD6-202ENST00000330331 C8orf46Q8TAG6 207 aa11.99□□□□□ -0.49
RGPD6-202ENST00000330331 SPRY4Q9C004 299 aa11.99□□□□□ -0.49
RGPD6-202ENST00000330331 DPM2O94777 84 aa11.98□□□□□ -0.49
RGPD6-202ENST00000330331 SRSF1Q07955 248 aaKnown RBP eCLIP11.98□□□□□ -0.49
RGPD6-202ENST00000330331 TWIST1Q15672 202 aa11.98□□□□□ -0.49
RGPD6-202ENST00000330331 CFAP126Q5VTH2 177 aa11.98□□□□□ -0.49
RGPD6-202ENST00000330331 DEFB124Q8NES8 71 aa11.98□□□□□ -0.49
RGPD6-202ENST00000330331 HIGD1AQ9Y241 93 aa11.98□□□□□ -0.49
RGPD6-202ENST00000330331 PSMB2P49721 201 aa11.98□□□□□ -0.49
RGPD6-202ENST00000330331 TPSG1Q9NRR2 321 aa11.98□□□□□ -0.49
RGPD6-202ENST00000330331 A0A1W2PPI3 338 aa11.97□□□□□ -0.49
RGPD6-202ENST00000330331 Q6AWC8 147 aa11.97□□□□□ -0.49
RGPD6-202ENST00000330331 MORN3Q6PF18 240 aaPredicted RBP11.97□□□□□ -0.49
RGPD6-202ENST00000330331 RPUSD1Q9UJJ7 312 aaKnown RBP11.97□□□□□ -0.49
RGPD6-202ENST00000330331 M0R3E3 92 aa11.97□□□□□ -0.49
RGPD6-202ENST00000330331 HOXB4P17483 251 aaPredicted RBP11.97□□□□□ -0.49
RGPD6-202ENST00000330331 CARD19Q96LW7 228 aa11.97□□□□□ -0.49
RGPD6-202ENST00000330331 DSCAMO60469 2012 aa11.97□□□□□ -0.49
RGPD6-202ENST00000330331 RBP4P02753 201 aa11.96□□□□□ -0.49
RGPD6-202ENST00000330331 TRGV9Q99603 122 aa11.96□□□□□ -0.49
RGPD6-202ENST00000330331 MRPL35Q9NZE8 188 aaKnown RBP11.96□□□□□ -0.49
RGPD6-202ENST00000330331 VSTM5A8MXK1 200 aa11.96□□□□□ -0.49
RGPD6-202ENST00000330331 CECR9P0C854 216 aa11.96□□□□□ -0.49
RGPD6-202ENST00000330331 DIAPH2-AS1Q14236 149 aa11.96□□□□□ -0.49
RGPD6-202ENST00000330331 MAP1LC3AQ9H492 121 aa11.96□□□□□ -0.49
RGPD6-202ENST00000330331 ZNF71Q9NQZ8 489 aaPredicted RBP11.96□□□□□ -0.49
RGPD6-202ENST00000330331 MSRB1Q9NZV6 116 aa11.96□□□□□ -0.49
RGPD6-202ENST00000330331 LOC107984156A0A0G2JMH3 177 aa11.96□□□□□ -0.5
RGPD6-202ENST00000330331 SRSF6Q13247 344 aaKnown RBP11.96□□□□□ -0.5
RGPD6-202ENST00000330331 ARL17AQ8IVW1 177 aa11.96□□□□□ -0.5
RGPD6-202ENST00000330331 TMEM158Q8WZ71 300 aa11.96□□□□□ -0.5
RGPD6-202ENST00000330331 SLC25A39Q9BZJ4 359 aaPredicted RBP11.96□□□□□ -0.5
RGPD6-202ENST00000330331 TRBV7-9A0A0J9YWB2 115 aa11.95□□□□□ -0.5
RGPD6-202ENST00000330331 SHISA9B4DS77 424 aa11.95□□□□□ -0.5
RGPD6-202ENST00000330331 HOXA3O43365 443 aaPredicted RBP11.95□□□□□ -0.5
RGPD6-202ENST00000330331 GATA1P15976 413 aaPredicted RBP11.95□□□□□ -0.5
RGPD6-202ENST00000330331 NBL1P41271 181 aa11.95□□□□□ -0.5
RGPD6-202ENST00000330331 ZFP2Q6ZN57 461 aa11.95□□□□□ -0.5
RGPD6-202ENST00000330331 INTS1Q8N201 2190 aaKnown RBP11.95□□□□□ -0.5
RGPD6-202ENST00000330331 NDUFA3O95167 84 aa11.95□□□□□ -0.5
RGPD6-202ENST00000330331 CNIH1O95406 144 aa11.95□□□□□ -0.5
RGPD6-202ENST00000330331 TAL2Q16559 108 aa11.95□□□□□ -0.5
RGPD6-202ENST00000330331 MSMPQ1L6U9 139 aa11.95□□□□□ -0.5
RGPD6-202ENST00000330331 TMEM75Q8N9X5 138 aa11.95□□□□□ -0.5
RGPD6-202ENST00000330331 ATP6V0E2Q8NHE4 81 aa11.95□□□□□ -0.5
RGPD6-202ENST00000330331 TMEM167AQ8TBQ9 72 aa11.95□□□□□ -0.5
RGPD6-202ENST00000330331 CCL13Q99616 98 aa11.95□□□□□ -0.5
RGPD6-202ENST00000330331 RAB9BQ9NP90 201 aa11.95□□□□□ -0.5
RGPD6-202ENST00000330331 GVINP1Q7Z2Y8 2422 aa11.94□□□□□ -0.5
RGPD6-202ENST00000330331 TRBV7-3A0A075B6L6 115 aa11.94□□□□□ -0.5
RGPD6-202ENST00000330331 SPRY3O43610 288 aa11.94□□□□□ -0.5
RGPD6-202ENST00000330331 ZFAND6Q6FIF0 208 aa11.94□□□□□ -0.5
RGPD6-202ENST00000330331 FAM216BQ8N7L0 139 aa11.94□□□□□ -0.5
RGPD6-202ENST00000330331 OR10X1Q8NGY0 326 aa11.94□□□□□ -0.5
RGPD6-202ENST00000330331 DLX4Q92988 240 aaPredicted RBP11.94□□□□□ -0.5
RGPD6-202ENST00000330331 ICE1Q9Y2F5 2266 aa11.94□□□□□ -0.5
RGPD6-202ENST00000330331 TNFRSF13BO14836 293 aaPredicted RBP11.94□□□□□ -0.5
RGPD6-202ENST00000330331 SH2D1AO60880 128 aa11.94□□□□□ -0.5
RGPD6-202ENST00000330331 MEOX1P50221 254 aa11.94□□□□□ -0.5
RGPD6-202ENST00000330331 PSMG4Q5JS54 123 aa11.94□□□□□ -0.5
RGPD6-202ENST00000330331 SMIM20Q8N5G0 67 aa11.94□□□□□ -0.5
RGPD6-202ENST00000330331 KIR2DL4Q99706 377 aa11.94□□□□□ -0.5
RGPD6-202ENST00000330331 TMEM133Q9H2Q1 129 aa11.94□□□□□ -0.5
RGPD6-202ENST00000330331 INS-IGF2F8WCM5 200 aa11.93□□□□□ -0.5
RGPD6-202ENST00000330331 IL4P05112 153 aa11.93□□□□□ -0.5
RGPD6-202ENST00000330331 TEX29Q8N6K0 151 aa11.93□□□□□ -0.5
RGPD6-202ENST00000330331 PRRC2CQ9Y520 2896 aaKnown RBP11.93□□□□□ -0.5
RGPD6-202ENST00000330331 CRYGCP07315 174 aa11.93□□□□□ -0.5
RGPD6-202ENST00000330331 TMEM95Q3KNT9 176 aa11.93□□□□□ -0.5
RGPD6-202ENST00000330331 CNEP1R1Q8N9A8 125 aa11.93□□□□□ -0.5
RGPD6-202ENST00000330331 LINC01549A6NIU2 74 aa11.92□□□□□ -0.5
RGPD6-202ENST00000330331 TGFAP01135 160 aa11.92□□□□□ -0.5
RGPD6-202ENST00000330331 RPEQ96AT9 228 aa11.92□□□□□ -0.5
RGPD6-202ENST00000330331 SPRR3Q9UBC9 169 aa11.92□□□□□ -0.5
RGPD6-202ENST00000330331 DSPP15924 2871 aaKnown RBP11.92□□□□□ -0.5
RGPD6-202ENST00000330331 DSCAML1Q8TD84 2053 aa11.92□□□□□ -0.5
RGPD6-202ENST00000330331 TRBV19A0A075B6N1 114 aa11.92□□□□□ -0.5
RGPD6-202ENST00000330331 TRBV6-1A0A0K0K1D8 114 aa11.92□□□□□ -0.5
RGPD6-202ENST00000330331 IGKV3-15P01624 115 aa11.92□□□□□ -0.5
RGPD6-202ENST00000330331 NHLRC4P0CG21 123 aaPredicted RBP11.92□□□□□ -0.5
RGPD6-202ENST00000330331 ZNF833PQ6ZTB9 187 aa11.92□□□□□ -0.5
RGPD6-202ENST00000330331 CEP250Q9BV73 2442 aa11.92□□□□□ -0.5
RGPD6-202ENST00000330331 ATP5LO75964 103 aa11.92□□□□□ -0.5
RGPD6-202ENST00000330331 PPDPFLQ8WWR9 84 aa11.92□□□□□ -0.5
RGPD6-202ENST00000330331 ZFHX4Q86UP3 3567 aa11.91□□□□□ -0.5
RGPD6-202ENST00000330331 TNFRSF6BO95407 300 aa11.91□□□□□ -0.5
RGPD6-202ENST00000330331 SIGLEC15Q6ZMC9 328 aa11.91□□□□□ -0.5
RGPD6-202ENST00000330331 RNF185Q96GF1 192 aa11.91□□□□□ -0.5
RGPD6-202ENST00000330331 MZT1Q08AG7 82 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms