RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 FA2HQ7L5A8 372 aa12.03□□□□□ -0.48
BRCC3-201ENST00000330045 ZNF48Q96MX3 618 aaPredicted RBP12.03□□□□□ -0.48
BRCC3-201ENST00000330045 AKAP6Q13023 2319 aa12.03□□□□□ -0.48
BRCC3-201ENST00000330045 UTP20O75691 2785 aaKnown RBP12.03□□□□□ -0.48
BRCC3-201ENST00000330045 LOC105371242A0A075B767 164 aa12.03□□□□□ -0.48
BRCC3-201ENST00000330045 ODF3BA8MYP8 253 aa12.03□□□□□ -0.48
BRCC3-201ENST00000330045 F8W735 103 aaPredicted RBP12.03□□□□□ -0.48
BRCC3-201ENST00000330045 PRTN3P24158 256 aa12.03□□□□□ -0.48
BRCC3-201ENST00000330045 MPV17L2Q567V2 206 aa12.03□□□□□ -0.48
BRCC3-201ENST00000330045 ZNF493Q6ZR52 646 aa12.03□□□□□ -0.48
BRCC3-201ENST00000330045 SCRT2Q9NQ03 307 aa12.03□□□□□ -0.48
BRCC3-201ENST00000330045 ARHGAP32A7KAX9 2087 aa12.03□□□□□ -0.48
BRCC3-201ENST00000330045 SERTM2A0A1B0GWG4 89 aa12.02□□□□□ -0.48
BRCC3-201ENST00000330045 GNLYP22749 145 aa12.02□□□□□ -0.48
BRCC3-201ENST00000330045 LINC01545Q5VT33 79 aa12.02□□□□□ -0.48
BRCC3-201ENST00000330045 ARPC1AQ92747 370 aa12.02□□□□□ -0.48
BRCC3-201ENST00000330045 MS4A6AQ9H2W1 248 aa12.02□□□□□ -0.48
BRCC3-201ENST00000330045 C21orf62Q9NYP8 219 aa12.02□□□□□ -0.48
BRCC3-201ENST00000330045 TMEM189A5PLL7 270 aa12.02□□□□□ -0.49
BRCC3-201ENST00000330045 PSG9Q00887 426 aa12.02□□□□□ -0.49
BRCC3-201ENST00000330045 UBE2V1Q13404 147 aa12.02□□□□□ -0.49
BRCC3-201ENST00000330045 LYZL1Q6UWQ5 148 aa12.02□□□□□ -0.49
BRCC3-201ENST00000330045 TTC9CQ8N5M4 171 aa12.02□□□□□ -0.49
BRCC3-201ENST00000330045 OR10AG1Q8NH19 301 aa12.02□□□□□ -0.49
BRCC3-201ENST00000330045 ZNF747Q9BV97 191 aa12.02□□□□□ -0.49
BRCC3-201ENST00000330045 TMSB15BA0A087X1C1 80 aa12.01□□□□□ -0.49
BRCC3-201ENST00000330045 NCBP2LA6PVI3 153 aaKnown RBP12.01□□□□□ -0.49
BRCC3-201ENST00000330045 PMCHL2Q9BQD1 86 aa12.01□□□□□ -0.49
BRCC3-201ENST00000330045 NDPQ00604 133 aa12.01□□□□□ -0.49
BRCC3-201ENST00000330045 THYN1Q9P016 225 aa12.01□□□□□ -0.49
BRCC3-201ENST00000330045 SH2D1AO60880 128 aa12□□□□□ -0.49
BRCC3-201ENST00000330045 NUDT3O95989 172 aa12□□□□□ -0.49
BRCC3-201ENST00000330045 IGHV3-23P01764 117 aa12□□□□□ -0.49
BRCC3-201ENST00000330045 TMEM213A2RRL7 107 aa12□□□□□ -0.49
BRCC3-201ENST00000330045 D6R8Y8 96 aa12□□□□□ -0.49
BRCC3-201ENST00000330045 RPL7P18124 248 aaKnown RBP12□□□□□ -0.49
BRCC3-201ENST00000330045 IFI27P40305 119 aaPredicted RBP12□□□□□ -0.49
BRCC3-201ENST00000330045 CSMD1Q96PZ7 3565 aa12□□□□□ -0.49
BRCC3-201ENST00000330045 IGKV2-40A0A087WW87 121 aaPredicted RBP11.99□□□□□ -0.49
BRCC3-201ENST00000330045 A0A1W2PPR1 153 aa11.99□□□□□ -0.49
BRCC3-201ENST00000330045 IGKV2D-40P01614 121 aaPredicted RBP11.99□□□□□ -0.49
BRCC3-201ENST00000330045 SAPCD1Q5SSQ6 148 aa11.99□□□□□ -0.49
BRCC3-201ENST00000330045 FAM104BQ5XKR9 115 aa11.99□□□□□ -0.49
BRCC3-201ENST00000330045 CCDC144NLQ6NUI1 221 aa11.99□□□□□ -0.49
BRCC3-201ENST00000330045 OR2T8A6NH00 312 aa11.99□□□□□ -0.49
BRCC3-201ENST00000330045 FAM106CPP0CH98 169 aa11.99□□□□□ -0.49
BRCC3-201ENST00000330045 RELQ04864 619 aaPredicted RBP11.99□□□□□ -0.49
BRCC3-201ENST00000330045 FAM106AQ4KMX7 169 aa11.99□□□□□ -0.49
BRCC3-201ENST00000330045 BVES-AS1Q5T3Y7 98 aa11.99□□□□□ -0.49
BRCC3-201ENST00000330045 COX8CQ7Z4L0 72 aa11.99□□□□□ -0.49
BRCC3-201ENST00000330045 DYNAPQ8N1N2 210 aa11.99□□□□□ -0.49
BRCC3-201ENST00000330045 LOC389332A0A1B0GUA5 103 aa11.98□□□□□ -0.49
BRCC3-201ENST00000330045 AMN1Q8IY45 258 aa11.98□□□□□ -0.49
BRCC3-201ENST00000330045 ARL6IP6Q8N6S5 226 aa11.98□□□□□ -0.49
BRCC3-201ENST00000330045 PRELID3AQ96N28 172 aa11.98□□□□□ -0.49
BRCC3-201ENST00000330045 PRR25Q96S07 402 aa11.98□□□□□ -0.49
BRCC3-201ENST00000330045 SIGLEC8Q9NYZ4 499 aa11.98□□□□□ -0.49
BRCC3-201ENST00000330045 U3KQK5 164 aa11.98□□□□□ -0.49
BRCC3-201ENST00000330045 CRYBG3Q68DQ2 2970 aa11.98□□□□□ -0.49
BRCC3-201ENST00000330045 C12orf54Q6X4T0 127 aa11.98□□□□□ -0.49
BRCC3-201ENST00000330045 VMO1Q7Z5L0 202 aa11.98□□□□□ -0.49
BRCC3-201ENST00000330045 EPG5Q9HCE0 2579 aa11.98□□□□□ -0.49
BRCC3-201ENST00000330045 C19orf84I3L1E1 186 aa11.97□□□□□ -0.49
BRCC3-201ENST00000330045 NCR2O95944 276 aa11.97□□□□□ -0.49
BRCC3-201ENST00000330045 CTSGP08311 255 aa11.97□□□□□ -0.49
BRCC3-201ENST00000330045 SFTPCP11686 197 aa11.97□□□□□ -0.49
BRCC3-201ENST00000330045 ORMDL3Q8N138 153 aa11.97□□□□□ -0.49
BRCC3-201ENST00000330045 Q8N6K4 173 aa11.97□□□□□ -0.49
BRCC3-201ENST00000330045 RABAC1Q9UI14 185 aa11.97□□□□□ -0.49
BRCC3-201ENST00000330045 CBY1Q9Y3M2 126 aa11.97□□□□□ -0.49
BRCC3-201ENST00000330045 USP9XQ93008 2570 aaPredicted RBP11.97□□□□□ -0.49
BRCC3-201ENST00000330045 A0A096LNJ9 63 aa11.97□□□□□ -0.49
BRCC3-201ENST00000330045 SCGB2A1O75556 95 aa11.97□□□□□ -0.49
BRCC3-201ENST00000330045 LOXL1Q08397 574 aaPredicted RBP11.97□□□□□ -0.49
BRCC3-201ENST00000330045 CSMD2Q7Z408 3487 aa11.96□□□□□ -0.49
BRCC3-201ENST00000330045 MUC21A0A0G2JKD1 596 aa11.96□□□□□ -0.49
BRCC3-201ENST00000330045 MUC21A0A140T8X8 626 aa11.96□□□□□ -0.49
BRCC3-201ENST00000330045 FBLL1A6NHQ2 334 aaKnown RBP11.96□□□□□ -0.49
BRCC3-201ENST00000330045 EGR2P11161 476 aaPredicted RBP11.96□□□□□ -0.49
BRCC3-201ENST00000330045 MUC21Q5SSG8 566 aa11.96□□□□□ -0.49
BRCC3-201ENST00000330045 SMAD5-AS1Q9Y6J3 95 aa11.96□□□□□ -0.49
BRCC3-201ENST00000330045 IGHV2-70DA0A0C4DH43 119 aa11.96□□□□□ -0.5
BRCC3-201ENST00000330045 OOSP1A8MZH6 123 aa11.96□□□□□ -0.5
BRCC3-201ENST00000330045 HIST1H1AQ02539 215 aaPredicted RBP11.96□□□□□ -0.5
BRCC3-201ENST00000330045 EBI3Q14213 229 aa11.96□□□□□ -0.5
BRCC3-201ENST00000330045 MRPL51Q4U2R6 128 aaKnown RBP11.96□□□□□ -0.5
BRCC3-201ENST00000330045 C11orf71Q6IPW1 123 aa11.96□□□□□ -0.5
BRCC3-201ENST00000330045 C1orf122Q6ZSJ8 110 aa11.96□□□□□ -0.5
BRCC3-201ENST00000330045 OR8A1Q8NGG7 326 aa11.96□□□□□ -0.5
BRCC3-201ENST00000330045 TAX1BP3O14907 124 aa11.95□□□□□ -0.5
BRCC3-201ENST00000330045 COX8AP10176 69 aa11.95□□□□□ -0.5
BRCC3-201ENST00000330045 TMEM11P17152 192 aa11.95□□□□□ -0.5
BRCC3-201ENST00000330045 BMI1P35226 326 aa11.95□□□□□ -0.5
BRCC3-201ENST00000330045 RPS20P60866 119 aaKnown RBP11.95□□□□□ -0.5
BRCC3-201ENST00000330045 VAMP3Q15836 100 aa11.95□□□□□ -0.5
BRCC3-201ENST00000330045 IGFL4Q6B9Z1 124 aa11.95□□□□□ -0.5
BRCC3-201ENST00000330045 DEFB125Q8N687 156 aa11.95□□□□□ -0.5
BRCC3-201ENST00000330045 Q8TAT8 98 aa11.95□□□□□ -0.5
BRCC3-201ENST00000330045 ITLN2Q8WWU7 325 aaPredicted RBP11.95□□□□□ -0.5
BRCC3-201ENST00000330045 VGLL1Q99990 258 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms