RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 PXMP4Q9Y6I8 212 aa17.43■□□□□ 0.38
PPP4R4-202ENST00000328839 HSPG2P98160 4391 aa17.42■□□□□ 0.38
PPP4R4-202ENST00000328839 L7N2F9 121 aa17.42■□□□□ 0.38
PPP4R4-202ENST00000328839 MBPP02686 304 aaPredicted RBP17.42■□□□□ 0.38
PPP4R4-202ENST00000328839 VAMP2P63027 116 aa17.42■□□□□ 0.38
PPP4R4-202ENST00000328839 ZNF701M0R085 212 aaPredicted RBP17.41■□□□□ 0.38
PPP4R4-202ENST00000328839 BTCP35070 178 aa17.41■□□□□ 0.38
PPP4R4-202ENST00000328839 RXFP4Q8TDU9 374 aa17.41■□□□□ 0.38
PPP4R4-202ENST00000328839 TRAV12-3A0A0B4J271 114 aa17.4■□□□□ 0.38
PPP4R4-202ENST00000328839 CCSO14618 274 aa17.4■□□□□ 0.38
PPP4R4-202ENST00000328839 IGLC2P0DOY2 106 aa17.4■□□□□ 0.38
PPP4R4-202ENST00000328839 HOXA5P20719 270 aa17.4■□□□□ 0.38
PPP4R4-202ENST00000328839 BCAP31P51572 246 aa17.4■□□□□ 0.38
PPP4R4-202ENST00000328839 TTC32Q5I0X7 151 aa17.4■□□□□ 0.38
PPP4R4-202ENST00000328839 LINC00612Q8N6U2 182 aa17.4■□□□□ 0.38
PPP4R4-202ENST00000328839 MITD1Q8WV92 249 aa17.4■□□□□ 0.38
PPP4R4-202ENST00000328839 LSM5Q9Y4Y9 91 aaKnown RBP17.4■□□□□ 0.38
PPP4R4-202ENST00000328839 H3BQ15 152 aa17.39■□□□□ 0.37
PPP4R4-202ENST00000328839 LEPP41159 167 aa17.39■□□□□ 0.37
PPP4R4-202ENST00000328839 CAMLGP49069 296 aa17.39■□□□□ 0.37
PPP4R4-202ENST00000328839 RAB31Q13636 194 aa17.39■□□□□ 0.37
PPP4R4-202ENST00000328839 ZNF846Q147U1 533 aa17.39■□□□□ 0.37
PPP4R4-202ENST00000328839 Q6ZRG5 221 aa17.39■□□□□ 0.37
PPP4R4-202ENST00000328839 SPATA12Q7Z6I5 190 aa17.39■□□□□ 0.37
PPP4R4-202ENST00000328839 FAM25EA8MYX2 175 aa17.38■□□□□ 0.37
PPP4R4-202ENST00000328839 ZNF503Q96F45 646 aa17.38■□□□□ 0.37
PPP4R4-202ENST00000328839 KRTAP1-5Q9BYS1 174 aa17.38■□□□□ 0.37
PPP4R4-202ENST00000328839 RBM38Q9H0Z9 239 aaKnown RBP17.38■□□□□ 0.37
PPP4R4-202ENST00000328839 DNAJC4Q9NNZ3 241 aa17.38■□□□□ 0.37
PPP4R4-202ENST00000328839 TRAV5A0A0B4J249 113 aa17.37■□□□□ 0.37
PPP4R4-202ENST00000328839 CT45A10P0DMU9 189 aa17.37■□□□□ 0.37
PPP4R4-202ENST00000328839 CAV2P51636 162 aa17.37■□□□□ 0.37
PPP4R4-202ENST00000328839 MIC13Q5XKP0 118 aa17.37■□□□□ 0.37
PPP4R4-202ENST00000328839 NRARPQ7Z6K4 114 aa17.37■□□□□ 0.37
PPP4R4-202ENST00000328839 SAT2Q96F10 170 aaPredicted RBP17.37■□□□□ 0.37
PPP4R4-202ENST00000328839 SDHCQ99643 169 aaPredicted RBP17.37■□□□□ 0.37
PPP4R4-202ENST00000328839 TMPRSS5Q9H3S3 457 aa17.37■□□□□ 0.37
PPP4R4-202ENST00000328839 CST7O76096 145 aa17.36■□□□□ 0.37
PPP4R4-202ENST00000328839 ESRGQ1W209 222 aa17.36■□□□□ 0.37
PPP4R4-202ENST00000328839 Q9H3A6 140 aa17.36■□□□□ 0.37
PPP4R4-202ENST00000328839 NPIPB6E9PJ23 425 aa17.35■□□□□ 0.37
PPP4R4-202ENST00000328839 GUK1Q16774 197 aa17.35■□□□□ 0.37
PPP4R4-202ENST00000328839 Q6ZTI0 123 aa17.35■□□□□ 0.37
PPP4R4-202ENST00000328839 OR1L4Q8NGR5 311 aa17.35■□□□□ 0.37
PPP4R4-202ENST00000328839 ODF3Q96PU9 254 aa17.35■□□□□ 0.37
PPP4R4-202ENST00000328839 PYGO2Q9BRQ0 406 aa17.35■□□□□ 0.37
PPP4R4-202ENST00000328839 C20orf85Q9H1P6 137 aa17.35■□□□□ 0.37
PPP4R4-202ENST00000328839 LRP1BQ9NZR2 4599 aa17.34■□□□□ 0.37
PPP4R4-202ENST00000328839 IL7P13232 177 aa17.34■□□□□ 0.37
PPP4R4-202ENST00000328839 ZNF431Q8TF32 576 aaPredicted RBP17.34■□□□□ 0.37
PPP4R4-202ENST00000328839 PFDN5Q99471 154 aa17.34■□□□□ 0.37
PPP4R4-202ENST00000328839 UPK3BQ9BT76 320 aa17.34■□□□□ 0.37
PPP4R4-202ENST00000328839 UQCC1Q9NVA1 299 aa17.34■□□□□ 0.37
PPP4R4-202ENST00000328839 C5orf51A6NDU8 294 aa17.33■□□□□ 0.36
PPP4R4-202ENST00000328839 CNPY1Q3B7I2 92 aa17.33■□□□□ 0.36
PPP4R4-202ENST00000328839 ZNF586Q9NXT0 402 aa17.33■□□□□ 0.36
PPP4R4-202ENST00000328839 MRPS16Q9Y3D3 137 aaKnown RBP17.33■□□□□ 0.36
PPP4R4-202ENST00000328839 TRGV2A0A075B6R0 118 aa17.32■□□□□ 0.36
PPP4R4-202ENST00000328839 UBE2L5PA0A1B0GUS4 154 aa17.32■□□□□ 0.36
PPP4R4-202ENST00000328839 FAM24AA6NFZ4 105 aa17.32■□□□□ 0.36
PPP4R4-202ENST00000328839 H3BNG1 76 aa17.32■□□□□ 0.36
PPP4R4-202ENST00000328839 BAXQ07812 192 aa17.32■□□□□ 0.36
PPP4R4-202ENST00000328839 WDR83OSQ9Y284 106 aa17.32■□□□□ 0.36
PPP4R4-202ENST00000328839 DAZ2Q13117 558 aaKnown RBP17.31■□□□□ 0.36
PPP4R4-202ENST00000328839 ERCC8Q13216 396 aa17.31■□□□□ 0.36
PPP4R4-202ENST00000328839 GSN-AS1Q9NRJ2 163 aa17.31■□□□□ 0.36
PPP4R4-202ENST00000328839 TRAV6A0A075B6T7 132 aa17.3■□□□□ 0.36
PPP4R4-202ENST00000328839 A0A1W2PPQ1 181 aa17.3■□□□□ 0.36
PPP4R4-202ENST00000328839 C7orf71A4D174 169 aa17.3■□□□□ 0.36
PPP4R4-202ENST00000328839 M0R3E3 92 aa17.3■□□□□ 0.36
PPP4R4-202ENST00000328839 SLC25A5P05141 298 aaKnown RBP17.3■□□□□ 0.36
PPP4R4-202ENST00000328839 PVALBP20472 110 aaPredicted RBP17.3■□□□□ 0.36
PPP4R4-202ENST00000328839 S100A10P60903 97 aa17.3■□□□□ 0.36
PPP4R4-202ENST00000328839 SLC39A9Q9NUM3 307 aa17.3■□□□□ 0.36
PPP4R4-202ENST00000328839 ZNF253O75346 499 aa17.29■□□□□ 0.36
PPP4R4-202ENST00000328839 C12orf45Q8N5I9 185 aaPredicted RBP17.29■□□□□ 0.36
PPP4R4-202ENST00000328839 ZNF680Q8NEM1 530 aa17.29■□□□□ 0.36
PPP4R4-202ENST00000328839 TRBV19A0A075B6N1 114 aa17.28■□□□□ 0.36
PPP4R4-202ENST00000328839 TRGV1A0A0A0MS02 117 aa17.28■□□□□ 0.36
PPP4R4-202ENST00000328839 RPL29P47914 159 aaKnown RBP17.28■□□□□ 0.36
PPP4R4-202ENST00000328839 KRTAP10-2P60368 255 aa17.28■□□□□ 0.36
PPP4R4-202ENST00000328839 MRPL53Q96EL3 112 aaKnown RBP17.28■□□□□ 0.36
PPP4R4-202ENST00000328839 SEC22CQ9BRL7 303 aa17.28■□□□□ 0.36
PPP4R4-202ENST00000328839 TIMM9Q9Y5J7 89 aa17.28■□□□□ 0.36
PPP4R4-202ENST00000328839 A0A096LPF7 62 aa17.27■□□□□ 0.36
PPP4R4-202ENST00000328839 LYRM1O43325 122 aa17.27■□□□□ 0.36
PPP4R4-202ENST00000328839 BTN1A1Q13410 526 aa17.27■□□□□ 0.36
PPP4R4-202ENST00000328839 Q8N1X5 172 aa17.27■□□□□ 0.36
PPP4R4-202ENST00000328839 BLNKQ8WV28 456 aa17.27■□□□□ 0.36
PPP4R4-202ENST00000328839 VSIG2Q96IQ7 327 aa17.27■□□□□ 0.36
PPP4R4-202ENST00000328839 FUT9Q9Y231 359 aa17.27■□□□□ 0.36
PPP4R4-202ENST00000328839 PLA2G10O15496 165 aa17.26■□□□□ 0.35
PPP4R4-202ENST00000328839 TCRBP04435 133 aa17.26■□□□□ 0.35
PPP4R4-202ENST00000328839 FGF7P21781 194 aa17.26■□□□□ 0.35
PPP4R4-202ENST00000328839 RNASE4P34096 147 aaKnown RBP17.26■□□□□ 0.35
PPP4R4-202ENST00000328839 SULT1A1P50225 295 aa17.26■□□□□ 0.35
PPP4R4-202ENST00000328839 CD300CQ08708 224 aa17.26■□□□□ 0.35
PPP4R4-202ENST00000328839 VWC2Q2TAL6 325 aa17.26■□□□□ 0.35
PPP4R4-202ENST00000328839 STX12Q86Y82 276 aa17.26■□□□□ 0.35
PPP4R4-202ENST00000328839 C11orf72Q8NBR9 251 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms