RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 APC2O95996 2303 aa9.1□□□□□ -0.95
COL4A5-201ENST00000328300 RBAKDNA6NC62 111 aa9.1□□□□□ -0.95
COL4A5-201ENST00000328300 IGLC1P0CG04 106 aa9.1□□□□□ -0.95
COL4A5-201ENST00000328300 HOXA3O43365 443 aaPredicted RBP9.1□□□□□ -0.95
COL4A5-201ENST00000328300 HTN3P15516 51 aa9.1□□□□□ -0.95
COL4A5-201ENST00000328300 LINC00205P59089 165 aa9.09□□□□□ -0.95
COL4A5-201ENST00000328300 OR9G4Q8NGQ1 327 aa9.09□□□□□ -0.95
COL4A5-201ENST00000328300 PLNP26678 52 aa9.09□□□□□ -0.95
COL4A5-201ENST00000328300 SEM1Q6ZVN7 128 aa9.09□□□□□ -0.95
COL4A5-201ENST00000328300 CHCHD5Q9BSY4 110 aa9.09□□□□□ -0.95
COL4A5-201ENST00000328300 SFTA2Q6UW10 78 aa9.09□□□□□ -0.95
COL4A5-201ENST00000328300 TRAV12-3A0A0B4J271 114 aa9.09□□□□□ -0.95
COL4A5-201ENST00000328300 SAMD5Q5TGI4 173 aa9.09□□□□□ -0.95
COL4A5-201ENST00000328300 ZNF479Q96JC4 524 aa9.09□□□□□ -0.95
COL4A5-201ENST00000328300 MUC22E2RYF6 1773 aaPredicted RBP9.09□□□□□ -0.95
COL4A5-201ENST00000328300 A8MWV9 139 aa9.09□□□□□ -0.96
COL4A5-201ENST00000328300 TMEM86BQ8N661 226 aa9.09□□□□□ -0.96
COL4A5-201ENST00000328300 TRGV1A0A0A0MS02 117 aa9.08□□□□□ -0.96
COL4A5-201ENST00000328300 CENPVL3A0A0U1RRI6 287 aa9.08□□□□□ -0.96
COL4A5-201ENST00000328300 C11orf44Q8N8P7 122 aa9.08□□□□□ -0.96
COL4A5-201ENST00000328300 TSSC4Q9Y5U2 329 aaPredicted RBP9.08□□□□□ -0.96
COL4A5-201ENST00000328300 LGALS1P09382 135 aaKnown RBP9.08□□□□□ -0.96
COL4A5-201ENST00000328300 PRR20EP86478 221 aa9.08□□□□□ -0.96
COL4A5-201ENST00000328300 PRR20CP86479 221 aa9.08□□□□□ -0.96
COL4A5-201ENST00000328300 PRR20DP86480 221 aa9.08□□□□□ -0.96
COL4A5-201ENST00000328300 PRR20BP86481 221 aa9.08□□□□□ -0.96
COL4A5-201ENST00000328300 PRR20AP86496 221 aa9.08□□□□□ -0.96
COL4A5-201ENST00000328300 PYY3Q5JQD4 70 aa9.08□□□□□ -0.96
COL4A5-201ENST00000328300 SPXQ9BT56 116 aa9.08□□□□□ -0.96
COL4A5-201ENST00000328300 WIPF3A6NGB9 483 aa9.08□□□□□ -0.96
COL4A5-201ENST00000328300 D6R8Y8 96 aa9.08□□□□□ -0.96
COL4A5-201ENST00000328300 VGLL1Q99990 258 aa9.08□□□□□ -0.96
COL4A5-201ENST00000328300 MMP23AO75900 390 aa9.08□□□□□ -0.96
COL4A5-201ENST00000328300 DEFB131AP59861 70 aa9.08□□□□□ -0.96
COL4A5-201ENST00000328300 RASL10AQ92737 203 aa9.08□□□□□ -0.96
COL4A5-201ENST00000328300 IGHV4-39P01824 125 aa9.08□□□□□ -0.96
COL4A5-201ENST00000328300 MST1LQ2TV78 715 aa9.08□□□□□ -0.96
COL4A5-201ENST00000328300 CNOT1A5YKK6 2376 aaKnown RBP9.07□□□□□ -0.96
COL4A5-201ENST00000328300 CKS1BP61024 79 aa9.07□□□□□ -0.96
COL4A5-201ENST00000328300 GAGE13Q4V321 117 aa9.07□□□□□ -0.96
COL4A5-201ENST00000328300 C8orf86Q6ZUL3 223 aa9.07□□□□□ -0.96
COL4A5-201ENST00000328300 RNF152Q8N8N0 203 aa9.07□□□□□ -0.96
COL4A5-201ENST00000328300 TPRP12270 2363 aaKnown RBP9.07□□□□□ -0.96
COL4A5-201ENST00000328300 TRAV8-4A0A0B4J246 113 aa9.07□□□□□ -0.96
COL4A5-201ENST00000328300 IGLC7A0M8Q6 106 aa9.07□□□□□ -0.96
COL4A5-201ENST00000328300 GZMBP10144 247 aa9.07□□□□□ -0.96
COL4A5-201ENST00000328300 TEX43Q6ZNM6 134 aa9.07□□□□□ -0.96
COL4A5-201ENST00000328300 NCOR1O75376 2440 aa9.07□□□□□ -0.96
COL4A5-201ENST00000328300 TRBV7-9A0A0J9YWB2 115 aa9.07□□□□□ -0.96
COL4A5-201ENST00000328300 G3V318 75 aa9.07□□□□□ -0.96
COL4A5-201ENST00000328300 COL4A3Q01955 1670 aa9.07□□□□□ -0.96
COL4A5-201ENST00000328300 ZNRD1Q9P1U0 126 aa9.07□□□□□ -0.96
COL4A5-201ENST00000328300 FGF23Q9GZV9 251 aaPredicted RBP9.06□□□□□ -0.96
COL4A5-201ENST00000328300 IGHV1OR15-1A0A075B7D0 117 aa9.06□□□□□ -0.96
COL4A5-201ENST00000328300 A0A087WX48 190 aa9.06□□□□□ -0.96
COL4A5-201ENST00000328300 TMEM238C9JI98 176 aa9.06□□□□□ -0.96
COL4A5-201ENST00000328300 PAX2Q02962 417 aa9.06□□□□□ -0.96
COL4A5-201ENST00000328300 Q0VG73 95 aa9.06□□□□□ -0.96
COL4A5-201ENST00000328300 MLANAQ16655 118 aa9.06□□□□□ -0.96
COL4A5-201ENST00000328300 ZNF876PQ49A33 203 aa9.06□□□□□ -0.96
COL4A5-201ENST00000328300 MRPL52Q86TS9 123 aaKnown RBP9.06□□□□□ -0.96
COL4A5-201ENST00000328300 Q8NA96 180 aa9.06□□□□□ -0.96
COL4A5-201ENST00000328300 FOXI2Q6ZQN5 318 aa9.06□□□□□ -0.96
COL4A5-201ENST00000328300 TMEM131Q92545 1883 aa9.06□□□□□ -0.96
COL4A5-201ENST00000328300 PPIFP30405 207 aaKnown RBP9.06□□□□□ -0.96
COL4A5-201ENST00000328300 CDKN1BP46527 198 aa9.06□□□□□ -0.96
COL4A5-201ENST00000328300 Q8TAT8 98 aa9.06□□□□□ -0.96
COL4A5-201ENST00000328300 TMEM141Q96I45 108 aa9.05□□□□□ -0.96
COL4A5-201ENST00000328300 TCTEX1D4Q5JR98 221 aa9.05□□□□□ -0.96
COL4A5-201ENST00000328300 TMEM256Q8N2U0 113 aa9.05□□□□□ -0.96
COL4A5-201ENST00000328300 MAJINQ3KP22 176 aa9.05□□□□□ -0.96
COL4A5-201ENST00000328300 GPR179Q6PRD1 2367 aa9.05□□□□□ -0.96
COL4A5-201ENST00000328300 PLXND1Q9Y4D7 1925 aa9.05□□□□□ -0.96
COL4A5-201ENST00000328300 ZNF815PA8K554 130 aa9.05□□□□□ -0.96
COL4A5-201ENST00000328300 GRNP28799 593 aaKnown RBP9.05□□□□□ -0.96
COL4A5-201ENST00000328300 DEFB112Q30KQ8 113 aa9.05□□□□□ -0.96
COL4A5-201ENST00000328300 PRR25Q96S07 402 aa9.05□□□□□ -0.96
COL4A5-201ENST00000328300 ACACAQ13085 2346 aa9.05□□□□□ -0.96
COL4A5-201ENST00000328300 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.05□□□□□ -0.96
COL4A5-201ENST00000328300 LURAP1LQ8IV03 231 aa9.05□□□□□ -0.96
COL4A5-201ENST00000328300 DPH3Q96FX2 82 aa9.05□□□□□ -0.96
COL4A5-201ENST00000328300 SLAQ13239 276 aa9.04□□□□□ -0.96
COL4A5-201ENST00000328300 IGHV4-61A0A0C4DH41 118 aa9.04□□□□□ -0.96
COL4A5-201ENST00000328300 TEX48A0A1B0GUV7 120 aa9.04□□□□□ -0.96
COL4A5-201ENST00000328300 SPAG8Q99932 426 aaPredicted RBP9.04□□□□□ -0.96
COL4A5-201ENST00000328300 TOMM7Q9P0U1 55 aa9.04□□□□□ -0.96
COL4A5-201ENST00000328300 ZNF491Q8N8L2 437 aa9.04□□□□□ -0.96
COL4A5-201ENST00000328300 ARMS2P0C7Q2 107 aa9.04□□□□□ -0.96
COL4A5-201ENST00000328300 LINC00574Q9H8X3 128 aa9.04□□□□□ -0.96
COL4A5-201ENST00000328300 DENND4AQ7Z401 1863 aa9.04□□□□□ -0.96
COL4A5-201ENST00000328300 RPL35AP18077 110 aaKnown RBP9.04□□□□□ -0.96
COL4A5-201ENST00000328300 UBE2V1Q13404 147 aa9.04□□□□□ -0.96
COL4A5-201ENST00000328300 UBE2DNLQ8IWF7 75 aa9.04□□□□□ -0.96
COL4A5-201ENST00000328300 ERCC8Q13216 396 aa9.03□□□□□ -0.96
COL4A5-201ENST00000328300 TPSG1Q9NRR2 321 aa9.03□□□□□ -0.96
COL4A5-201ENST00000328300 TRAV2A0A0B4J234 112 aa9.03□□□□□ -0.96
COL4A5-201ENST00000328300 SLC25A20O43772 301 aa9.03□□□□□ -0.96
COL4A5-201ENST00000328300 GAGE2BQ13066 116 aa9.03□□□□□ -0.96
COL4A5-201ENST00000328300 GAGE2EQ4V326 116 aa9.03□□□□□ -0.96
COL4A5-201ENST00000328300 ZNF48Q96MX3 618 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms