RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 IGKV2D-40P01614 121 aaPredicted RBP11.43□□□□□ -0.58
PRPF3-201ENST00000324862 NDUFA5Q16718 116 aa11.43□□□□□ -0.58
PRPF3-201ENST00000324862 ZNF674Q2M3X9 581 aa11.43□□□□□ -0.58
PRPF3-201ENST00000324862 EPDR1Q9UM22 224 aa11.43□□□□□ -0.58
PRPF3-201ENST00000324862 TSPAN4O14817 238 aa11.43□□□□□ -0.58
PRPF3-201ENST00000324862 PSG9Q00887 426 aa11.43□□□□□ -0.58
PRPF3-201ENST00000324862 LCN12Q6JVE5 192 aa11.43□□□□□ -0.58
PRPF3-201ENST00000324862 GOLT1AQ6ZVE7 132 aa11.43□□□□□ -0.58
PRPF3-201ENST00000324862 PSMG4Q5JS54 123 aa11.42□□□□□ -0.58
PRPF3-201ENST00000324862 CMTM2Q8TAZ6 248 aa11.42□□□□□ -0.58
PRPF3-201ENST00000324862 SLC50A1Q9BRV3 221 aa11.42□□□□□ -0.58
PRPF3-201ENST00000324862 SLC35B3Q9H1N7 401 aa11.42□□□□□ -0.58
PRPF3-201ENST00000324862 ZNF256Q9Y2P7 627 aaPredicted RBP11.42□□□□□ -0.58
PRPF3-201ENST00000324862 ARL2-SNX15V9GYD0 113 aa11.42□□□□□ -0.58
PRPF3-201ENST00000324862 PGPEP1LA6NFU8 196 aa11.41□□□□□ -0.58
PRPF3-201ENST00000324862 ZNF253O75346 499 aa11.41□□□□□ -0.58
PRPF3-201ENST00000324862 ATP6V1G1O75348 118 aa11.41□□□□□ -0.58
PRPF3-201ENST00000324862 TCRAP04437 139 aa11.41□□□□□ -0.58
PRPF3-201ENST00000324862 GDF5OSQ5U4N7 250 aa11.41□□□□□ -0.58
PRPF3-201ENST00000324862 C5orf17Q8NAS9 161 aa11.41□□□□□ -0.58
PRPF3-201ENST00000324862 WFDC9Q8NEX5 89 aa11.41□□□□□ -0.58
PRPF3-201ENST00000324862 TMEM218A2RU14 115 aa11.41□□□□□ -0.58
PRPF3-201ENST00000324862 PEX7O00628 323 aa11.41□□□□□ -0.58
PRPF3-201ENST00000324862 ERCC8Q13216 396 aa11.41□□□□□ -0.58
PRPF3-201ENST00000324862 OXLD1Q5BKU9 147 aa11.41□□□□□ -0.58
PRPF3-201ENST00000324862 LYPD1Q8N2G4 141 aa11.41□□□□□ -0.58
PRPF3-201ENST00000324862 PARLQ9H300 379 aa11.41□□□□□ -0.58
PRPF3-201ENST00000324862 AURKAIP1Q9NWT8 199 aaPredicted RBP11.41□□□□□ -0.58
PRPF3-201ENST00000324862 TRBV20OR9-2A0A075B6H5 130 aa11.4□□□□□ -0.58
PRPF3-201ENST00000324862 DIRC3C9JPN6 131 aa11.4□□□□□ -0.58
PRPF3-201ENST00000324862 ISLRO14498 428 aa11.4□□□□□ -0.58
PRPF3-201ENST00000324862 PSG3Q16557 428 aa11.4□□□□□ -0.58
PRPF3-201ENST00000324862 UQCC3Q6UW78 93 aa11.4□□□□□ -0.58
PRPF3-201ENST00000324862 ZNF738Q8NE65 137 aa11.4□□□□□ -0.58
PRPF3-201ENST00000324862 C2CD4CQ8TF44 421 aa11.4□□□□□ -0.58
PRPF3-201ENST00000324862 VGLL1Q99990 258 aa11.4□□□□□ -0.58
PRPF3-201ENST00000324862 PDE6DO43924 150 aa11.4□□□□□ -0.58
PRPF3-201ENST00000324862 RPL35P42766 123 aaKnown RBP11.39□□□□□ -0.59
PRPF3-201ENST00000324862 MEOX2P50222 304 aa11.39□□□□□ -0.59
PRPF3-201ENST00000324862 PAFAH1B2P68402 229 aa11.39□□□□□ -0.59
PRPF3-201ENST00000324862 APRG1Q8IVJ8 170 aa11.39□□□□□ -0.59
PRPF3-201ENST00000324862 NHLRC2Q8NBF2 726 aa11.39□□□□□ -0.59
PRPF3-201ENST00000324862 Q8TAT8 98 aa11.39□□□□□ -0.59
PRPF3-201ENST00000324862 NKX6-2Q9C056 277 aaPredicted RBP11.39□□□□□ -0.59
PRPF3-201ENST00000324862 WFDC10AQ9H1F0 79 aa11.39□□□□□ -0.59
PRPF3-201ENST00000324862 CD7P09564 240 aa11.39□□□□□ -0.59
PRPF3-201ENST00000324862 TAGLN2P37802 199 aaKnown RBP11.39□□□□□ -0.59
PRPF3-201ENST00000324862 ATG101Q9BSB4 218 aa11.39□□□□□ -0.59
PRPF3-201ENST00000324862 IGLV2-11P01706 119 aa11.38□□□□□ -0.59
PRPF3-201ENST00000324862 DEFB131AP59861 70 aa11.38□□□□□ -0.59
PRPF3-201ENST00000324862 C11orf52Q96A22 123 aa11.38□□□□□ -0.59
PRPF3-201ENST00000324862 SPAG8Q99932 426 aaPredicted RBP11.38□□□□□ -0.59
PRPF3-201ENST00000324862 F6UZH7 168 aa11.38□□□□□ -0.59
PRPF3-201ENST00000324862 F8W036 122 aa11.38□□□□□ -0.59
PRPF3-201ENST00000324862 TMEM250H0YL14 139 aa11.38□□□□□ -0.59
PRPF3-201ENST00000324862 ODF3L2Q3SX64 289 aa11.38□□□□□ -0.59
PRPF3-201ENST00000324862 SOHLH1Q5JUK2 328 aa11.38□□□□□ -0.59
PRPF3-201ENST00000324862 C9orf66Q5T8R8 295 aa11.38□□□□□ -0.59
PRPF3-201ENST00000324862 TXNDC17Q9BRA2 123 aa11.38□□□□□ -0.59
PRPF3-201ENST00000324862 AKR1C3P42330 323 aa11.37□□□□□ -0.59
PRPF3-201ENST00000324862 MAP6D1Q9H9H5 199 aa11.37□□□□□ -0.59
PRPF3-201ENST00000324862 KNCNA6PVL3 124 aa11.37□□□□□ -0.59
PRPF3-201ENST00000324862 IGKV3-20P01619 116 aa11.37□□□□□ -0.59
PRPF3-201ENST00000324862 CSN1S1P47710 185 aa11.37□□□□□ -0.59
PRPF3-201ENST00000324862 SNRPD3P62318 126 aaKnown RBP11.37□□□□□ -0.59
PRPF3-201ENST00000324862 HIST1H2BAQ96A08 127 aa11.37□□□□□ -0.59
PRPF3-201ENST00000324862 SMIM7Q9BQ49 75 aa11.37□□□□□ -0.59
PRPF3-201ENST00000324862 SMDT1Q9H4I9 107 aa11.37□□□□□ -0.59
PRPF3-201ENST00000324862 AGRNO00468 2067 aa11.36□□□□□ -0.59
PRPF3-201ENST00000324862 ZNF727A8MUV8 499 aa11.36□□□□□ -0.59
PRPF3-201ENST00000324862 ID1P41134 155 aa11.36□□□□□ -0.59
PRPF3-201ENST00000324862 GPR61Q9BZJ8 451 aa11.36□□□□□ -0.59
PRPF3-201ENST00000324862 TRAV25A0A0B4J276 109 aa11.36□□□□□ -0.59
PRPF3-201ENST00000324862 OR4C46A6NHA9 309 aa11.36□□□□□ -0.59
PRPF3-201ENST00000324862 RIPPLY3P57055 190 aa11.36□□□□□ -0.59
PRPF3-201ENST00000324862 HIST1H1AQ02539 215 aaPredicted RBP11.36□□□□□ -0.59
PRPF3-201ENST00000324862 PRNTQ86SH4 94 aa11.36□□□□□ -0.59
PRPF3-201ENST00000324862 TVP23CQ96ET8 276 aa11.36□□□□□ -0.59
PRPF3-201ENST00000324862 CENPWQ5EE01 88 aa11.35□□□□□ -0.59
PRPF3-201ENST00000324862 AGPAT4-IT1Q9H0P7 198 aa11.35□□□□□ -0.59
PRPF3-201ENST00000324862 MGAM2Q2M2H8 2515 aa11.35□□□□□ -0.59
PRPF3-201ENST00000324862 NOTCH1P46531 2555 aa11.35□□□□□ -0.59
PRPF3-201ENST00000324862 CNN1P51911 297 aaKnown RBP11.35□□□□□ -0.59
PRPF3-201ENST00000324862 UBE2G1P62253 170 aa11.34□□□□□ -0.59
PRPF3-201ENST00000324862 ACTL10Q5JWF8 245 aa11.34□□□□□ -0.59
PRPF3-201ENST00000324862 OR8A1Q8NGG7 326 aa11.34□□□□□ -0.59
PRPF3-201ENST00000324862 IGF2BP2-AS1Q96M15 143 aa11.34□□□□□ -0.59
PRPF3-201ENST00000324862 G3V4G9 280 aa11.34□□□□□ -0.59
PRPF3-201ENST00000324862 APOC3P02656 99 aa11.34□□□□□ -0.59
PRPF3-201ENST00000324862 INSL3P51460 131 aa11.34□□□□□ -0.59
PRPF3-201ENST00000324862 KIR3DS1Q14943 382 aa11.34□□□□□ -0.59
PRPF3-201ENST00000324862 BEAN1Q3B7T3 259 aa11.34□□□□□ -0.59
PRPF3-201ENST00000324862 PSG8Q9UQ74 426 aa11.34□□□□□ -0.59
PRPF3-201ENST00000324862 PRELID1Q9Y255 219 aa11.34□□□□□ -0.59
PRPF3-201ENST00000324862 KLF12Q9Y4X4 402 aa11.34□□□□□ -0.59
PRPF3-201ENST00000324862 J3KRW8 73 aa11.33□□□□□ -0.6
PRPF3-201ENST00000324862 FLI1Q01543 452 aaPredicted RBP11.33□□□□□ -0.6
PRPF3-201ENST00000324862 TMEM183BQ1AE95 376 aa11.33□□□□□ -0.6
PRPF3-201ENST00000324862 Q86TA4 180 aa11.33□□□□□ -0.6
PRPF3-201ENST00000324862 C8orf49Q96NF6 230 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms