RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 HLA-DQA1P01909 254 aa13.1□□□□□ -0.31
SSR4-201ENST00000320857 SLC35B1P78383 322 aa13.1□□□□□ -0.31
SSR4-201ENST00000320857 TMEM136Q6ZRR5 245 aa13.1□□□□□ -0.31
SSR4-201ENST00000320857 WIPF2Q8TF74 440 aaPredicted RBP13.1□□□□□ -0.31
SSR4-201ENST00000320857 NEU1Q99519 415 aa13.1□□□□□ -0.31
SSR4-201ENST00000320857 SLC50A1Q9BRV3 221 aa13.1□□□□□ -0.31
SSR4-201ENST00000320857 GFRA4Q9GZZ7 299 aa13.1□□□□□ -0.31
SSR4-201ENST00000320857 NPIPB6E9PJ23 425 aa13.09□□□□□ -0.31
SSR4-201ENST00000320857 NDUFA4O00483 81 aa13.09□□□□□ -0.31
SSR4-201ENST00000320857 RAB4BP61018 213 aa13.09□□□□□ -0.31
SSR4-201ENST00000320857 CFHR3Q02985 330 aa13.09□□□□□ -0.31
SSR4-201ENST00000320857 ATP5L2Q7Z4Y8 100 aa13.09□□□□□ -0.31
SSR4-201ENST00000320857 FAM231BA6NCW3 169 aa13.08□□□□□ -0.31
SSR4-201ENST00000320857 HIGD1CA8MV81 97 aa13.08□□□□□ -0.31
SSR4-201ENST00000320857 CHEK1O14757 476 aa13.08□□□□□ -0.31
SSR4-201ENST00000320857 FRMD6-AS1P0C7T7 363 aa13.08□□□□□ -0.31
SSR4-201ENST00000320857 FABP4P15090 132 aa13.08□□□□□ -0.31
SSR4-201ENST00000320857 OR10D4PQ8NGN7 298 aa13.08□□□□□ -0.31
SSR4-201ENST00000320857 CCDC168Q8NDH2 2452 aa13.08□□□□□ -0.32
SSR4-201ENST00000320857 CT45A10P0DMU9 189 aa13.08□□□□□ -0.32
SSR4-201ENST00000320857 SAPCD1Q5SSQ6 148 aa13.08□□□□□ -0.32
SSR4-201ENST00000320857 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.08□□□□□ -0.32
SSR4-201ENST00000320857 Q6YL49 198 aa13.08□□□□□ -0.32
SSR4-201ENST00000320857 OR4X2Q8NGF9 303 aa13.08□□□□□ -0.32
SSR4-201ENST00000320857 ZC2HC1AQ96GY0 325 aa13.08□□□□□ -0.32
SSR4-201ENST00000320857 HIST1H2BLQ99880 126 aa13.08□□□□□ -0.32
SSR4-201ENST00000320857 KLK15Q9H2R5 256 aa13.08□□□□□ -0.32
SSR4-201ENST00000320857 VPREB3Q9UKI3 123 aa13.08□□□□□ -0.32
SSR4-201ENST00000320857 IGHV3-66A0A0C4DH42 116 aa13.07□□□□□ -0.32
SSR4-201ENST00000320857 ZNF207O43670 478 aaKnown RBP13.07□□□□□ -0.32
SSR4-201ENST00000320857 CRISP2P16562 243 aa13.07□□□□□ -0.32
SSR4-201ENST00000320857 FAM209BQ5JX69 171 aa13.07□□□□□ -0.32
SSR4-201ENST00000320857 C16orf54Q6UWD8 224 aa13.07□□□□□ -0.32
SSR4-201ENST00000320857 CSPG4Q6UVK1 2322 aa13.07□□□□□ -0.32
SSR4-201ENST00000320857 IGKV2-40A0A087WW87 121 aaPredicted RBP13.06□□□□□ -0.32
SSR4-201ENST00000320857 TMEM89A2RUT3 159 aa13.06□□□□□ -0.32
SSR4-201ENST00000320857 IGKV2D-40P01614 121 aaPredicted RBP13.06□□□□□ -0.32
SSR4-201ENST00000320857 IGHV3-11P01762 117 aa13.06□□□□□ -0.32
SSR4-201ENST00000320857 APOHP02749 345 aaPredicted RBP13.06□□□□□ -0.32
SSR4-201ENST00000320857 LCN12Q6JVE5 192 aa13.06□□□□□ -0.32
SSR4-201ENST00000320857 OR2D3Q8NGH3 330 aa13.06□□□□□ -0.32
SSR4-201ENST00000320857 PACRGQ96M98 296 aaPredicted RBP13.06□□□□□ -0.32
SSR4-201ENST00000320857 CELSR1Q9NYQ6 3014 aa13.05□□□□□ -0.32
SSR4-201ENST00000320857 IGHV3OR16-13A0A075B7E8 117 aa13.05□□□□□ -0.32
SSR4-201ENST00000320857 IGHV3-74A0A0B4J1X5 117 aa13.05□□□□□ -0.32
SSR4-201ENST00000320857 TRBV12-3P01733 135 aa13.05□□□□□ -0.32
SSR4-201ENST00000320857 RBPMS2Q6ZRY4 209 aaKnown RBP13.05□□□□□ -0.32
SSR4-201ENST00000320857 TCF24Q7RTU0 167 aa13.05□□□□□ -0.32
SSR4-201ENST00000320857 IGHV3-49A0A0A0MS15 119 aa13.05□□□□□ -0.32
SSR4-201ENST00000320857 SMAD7O15105 426 aaKnown RBP13.05□□□□□ -0.32
SSR4-201ENST00000320857 IGHG4P01861 327 aa13.05□□□□□ -0.32
SSR4-201ENST00000320857 APCSP02743 223 aa13.05□□□□□ -0.32
SSR4-201ENST00000320857 AMBPP02760 352 aa13.05□□□□□ -0.32
SSR4-201ENST00000320857 COX8CQ7Z4L0 72 aa13.05□□□□□ -0.32
SSR4-201ENST00000320857 TMEM18Q96B42 140 aa13.05□□□□□ -0.32
SSR4-201ENST00000320857 CLEC5AQ9NY25 188 aa13.05□□□□□ -0.32
SSR4-201ENST00000320857 RBAKDNA6NC62 111 aa13.04□□□□□ -0.32
SSR4-201ENST00000320857 HLA-DMBP28068 263 aa13.04□□□□□ -0.32
SSR4-201ENST00000320857 Q0VG73 95 aa13.04□□□□□ -0.32
SSR4-201ENST00000320857 IGFL4Q6B9Z1 124 aa13.04□□□□□ -0.32
SSR4-201ENST00000320857 TEX29Q8N6K0 151 aa13.04□□□□□ -0.32
SSR4-201ENST00000320857 GTSF1Q8WW33 167 aa13.04□□□□□ -0.32
SSR4-201ENST00000320857 MRPL53Q96EL3 112 aaKnown RBP13.04□□□□□ -0.32
SSR4-201ENST00000320857 PRDM13Q9H4Q3 707 aa13.04□□□□□ -0.32
SSR4-201ENST00000320857 TEX15Q9BXT5 2789 aa13.04□□□□□ -0.32
SSR4-201ENST00000320857 A0A1B0GXF2 115 aa13.03□□□□□ -0.32
SSR4-201ENST00000320857 A0A1W2PS18 150 aa13.03□□□□□ -0.32
SSR4-201ENST00000320857 GRIFINA4D1Z8 144 aa13.03□□□□□ -0.32
SSR4-201ENST00000320857 HBBP68871 147 aa13.03□□□□□ -0.32
SSR4-201ENST00000320857 TMEM95Q3KNT9 176 aa13.03□□□□□ -0.32
SSR4-201ENST00000320857 Q71RC1 249 aaPredicted RBP13.03□□□□□ -0.32
SSR4-201ENST00000320857 GLMPQ8WWB7 406 aa13.03□□□□□ -0.32
SSR4-201ENST00000320857 PGLYRP4Q96LB8 373 aa13.03□□□□□ -0.32
SSR4-201ENST00000320857 C8orf49Q96NF6 230 aa13.03□□□□□ -0.32
SSR4-201ENST00000320857 PRR25Q96S07 402 aa13.03□□□□□ -0.32
SSR4-201ENST00000320857 NDFIP1Q9BT67 221 aa13.03□□□□□ -0.32
SSR4-201ENST00000320857 NPFFR1Q9GZQ6 430 aa13.03□□□□□ -0.32
SSR4-201ENST00000320857 NIT2Q9NQR4 276 aa13.03□□□□□ -0.32
SSR4-201ENST00000320857 ZNF705FA8MVS1 300 aaPredicted RBP13.02□□□□□ -0.32
SSR4-201ENST00000320857 PRB4P10163 310 aaPredicted RBP13.02□□□□□ -0.32
SSR4-201ENST00000320857 PSMB8P28062 276 aa13.02□□□□□ -0.32
SSR4-201ENST00000320857 UNQ9165/PRO28630Q6UXU0 137 aa13.02□□□□□ -0.32
SSR4-201ENST00000320857 ASCL2Q99929 193 aa13.02□□□□□ -0.32
SSR4-201ENST00000320857 PEF1Q9UBV8 284 aaKnown RBP13.02□□□□□ -0.32
SSR4-201ENST00000320857 MYO9AB2RTY4 2548 aa13.02□□□□□ -0.32
SSR4-201ENST00000320857 CRIP1P50238 77 aa13.02□□□□□ -0.33
SSR4-201ENST00000320857 FOXA3P55318 350 aaPredicted RBP13.02□□□□□ -0.33
SSR4-201ENST00000320857 PYY3Q5JQD4 70 aa13.02□□□□□ -0.33
SSR4-201ENST00000320857 FAM162BQ5T6X4 162 aa13.02□□□□□ -0.33
SSR4-201ENST00000320857 LCNL1Q6ZST4 164 aa13.02□□□□□ -0.33
SSR4-201ENST00000320857 C8orf86Q6ZUL3 223 aa13.02□□□□□ -0.33
SSR4-201ENST00000320857 BAGE3Q86Y29 109 aa13.02□□□□□ -0.33
SSR4-201ENST00000320857 VGLL1Q99990 258 aa13.02□□□□□ -0.33
SSR4-201ENST00000320857 CREBBPQ92793 2442 aa13.01□□□□□ -0.33
SSR4-201ENST00000320857 PCP4L1A6NKN8 68 aa13.01□□□□□ -0.33
SSR4-201ENST00000320857 CAMPP49913 170 aa13.01□□□□□ -0.33
SSR4-201ENST00000320857 OR10J3Q5JRS4 329 aa13.01□□□□□ -0.33
SSR4-201ENST00000320857 TMEM256Q8N2U0 113 aa13.01□□□□□ -0.33
SSR4-201ENST00000320857 TRAV8-2A0A0B4J237 113 aa13□□□□□ -0.33
SSR4-201ENST00000320857 HOXA3O43365 443 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms