RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 TRAV40A0A0B4J280 105 aa11.08□□□□□ -0.64
VRK3-201ENST00000316763 DIRC3C9JPN6 131 aa11.08□□□□□ -0.64
VRK3-201ENST00000316763 NPIPB6E9PJ23 425 aa11.08□□□□□ -0.64
VRK3-201ENST00000316763 FAM106CPP0CH98 169 aa11.08□□□□□ -0.64
VRK3-201ENST00000316763 S100A7P31151 101 aa11.08□□□□□ -0.64
VRK3-201ENST00000316763 PDE6HQ13956 83 aa11.08□□□□□ -0.64
VRK3-201ENST00000316763 FBLN7Q53RD9 439 aa11.08□□□□□ -0.64
VRK3-201ENST00000316763 PGLYRP4Q96LB8 373 aa11.08□□□□□ -0.64
VRK3-201ENST00000316763 C20orf144Q9BQM9 153 aa11.08□□□□□ -0.64
VRK3-201ENST00000316763 ALKBH7Q9BT30 221 aaPredicted RBP11.08□□□□□ -0.64
VRK3-201ENST00000316763 TRAV8-1A0A0A6YYK1 113 aa11.07□□□□□ -0.64
VRK3-201ENST00000316763 J3QLI3 93 aa11.07□□□□□ -0.64
VRK3-201ENST00000316763 AVPP01185 164 aa11.07□□□□□ -0.64
VRK3-201ENST00000316763 IGLV2-11P01706 119 aa11.07□□□□□ -0.64
VRK3-201ENST00000316763 KRTAP1-1Q07627 177 aa11.07□□□□□ -0.64
VRK3-201ENST00000316763 SIGLEC15Q6ZMC9 328 aa11.07□□□□□ -0.64
VRK3-201ENST00000316763 OR2D3Q8NGH3 330 aa11.07□□□□□ -0.64
VRK3-201ENST00000316763 TMUB1Q9BVT8 246 aa11.07□□□□□ -0.64
VRK3-201ENST00000316763 SSBP4Q9BWG4 385 aaPredicted RBP11.07□□□□□ -0.64
VRK3-201ENST00000316763 AAMDCQ9H7C9 122 aa11.07□□□□□ -0.64
VRK3-201ENST00000316763 SVEP1Q4LDE5 3571 aa11.07□□□□□ -0.64
VRK3-201ENST00000316763 HSBP1O75506 76 aa11.07□□□□□ -0.64
VRK3-201ENST00000316763 IGHV4-38-2P0DP08 117 aa11.07□□□□□ -0.64
VRK3-201ENST00000316763 NTF3P20783 257 aa11.07□□□□□ -0.64
VRK3-201ENST00000316763 ZNF414Q96IQ9 312 aa11.07□□□□□ -0.64
VRK3-201ENST00000316763 TXN2Q99757 166 aa11.07□□□□□ -0.64
VRK3-201ENST00000316763 S4R3C0 116 aa11.07□□□□□ -0.64
VRK3-201ENST00000316763 MRPS12O15235 138 aaKnown RBP11.06□□□□□ -0.64
VRK3-201ENST00000316763 NDPQ00604 133 aa11.06□□□□□ -0.64
VRK3-201ENST00000316763 PSG3Q16557 428 aa11.06□□□□□ -0.64
VRK3-201ENST00000316763 LINC00469Q8N7U9 141 aa11.06□□□□□ -0.64
VRK3-201ENST00000316763 GTSF1Q8WW33 167 aa11.06□□□□□ -0.64
VRK3-201ENST00000316763 C17orf77Q96MU5 243 aa11.06□□□□□ -0.64
VRK3-201ENST00000316763 SMR3AQ99954 134 aa11.06□□□□□ -0.64
VRK3-201ENST00000316763 PSG8Q9UQ74 426 aa11.06□□□□□ -0.64
VRK3-201ENST00000316763 IGHV3OR16-10A0A075B7F0 116 aa11.05□□□□□ -0.64
VRK3-201ENST00000316763 SERTM2A0A1B0GWG4 89 aa11.05□□□□□ -0.64
VRK3-201ENST00000316763 CSN1S1P47710 185 aa11.05□□□□□ -0.64
VRK3-201ENST00000316763 PSG9Q00887 426 aa11.05□□□□□ -0.64
VRK3-201ENST00000316763 A0A1B0GV90 55 aa11.05□□□□□ -0.64
VRK3-201ENST00000316763 M0R143 59 aa11.05□□□□□ -0.64
VRK3-201ENST00000316763 CHEK1O14757 476 aa11.05□□□□□ -0.64
VRK3-201ENST00000316763 NDUFB8O95169 186 aa11.05□□□□□ -0.64
VRK3-201ENST00000316763 C16orf54Q6UWD8 224 aa11.05□□□□□ -0.64
VRK3-201ENST00000316763 BRD3OSQ6XYD6 125 aa11.05□□□□□ -0.64
VRK3-201ENST00000316763 NIT1Q86X76 327 aa11.05□□□□□ -0.64
VRK3-201ENST00000316763 FAM19A2Q8N3H0 131 aa11.05□□□□□ -0.64
VRK3-201ENST00000316763 MIEN1Q9BRT3 115 aa11.05□□□□□ -0.64
VRK3-201ENST00000316763 MEGF9Q9H1U4 602 aa11.05□□□□□ -0.64
VRK3-201ENST00000316763 PAM16Q9Y3D7 125 aa11.05□□□□□ -0.64
VRK3-201ENST00000316763 IGHV7-81A0A0B4J1V7 117 aa11.04□□□□□ -0.64
VRK3-201ENST00000316763 HAX1O00165 279 aa11.04□□□□□ -0.64
VRK3-201ENST00000316763 CD5LO43866 347 aa11.04□□□□□ -0.64
VRK3-201ENST00000316763 RPL7P18124 248 aaKnown RBP11.04□□□□□ -0.64
VRK3-201ENST00000316763 FAM120AOSQ5T036 256 aa11.04□□□□□ -0.64
VRK3-201ENST00000316763 RNASEKQ6P5S7 137 aaKnown RBP11.04□□□□□ -0.64
VRK3-201ENST00000316763 ZNF705AQ6ZN79 300 aaPredicted RBP11.04□□□□□ -0.64
VRK3-201ENST00000316763 MRPL52Q86TS9 123 aaKnown RBP11.04□□□□□ -0.64
VRK3-201ENST00000316763 TLN2Q9Y4G6 2542 aa11.04□□□□□ -0.64
VRK3-201ENST00000316763 HIVEP1P15822 2718 aa11.04□□□□□ -0.64
VRK3-201ENST00000316763 F8W735 103 aaPredicted RBP11.03□□□□□ -0.64
VRK3-201ENST00000316763 M0R2Z0 102 aa11.03□□□□□ -0.64
VRK3-201ENST00000316763 C3orf79P0CE67 100 aa11.03□□□□□ -0.64
VRK3-201ENST00000316763 FOSL1P15407 271 aa11.03□□□□□ -0.64
VRK3-201ENST00000316763 FOXA3P55318 350 aaPredicted RBP11.03□□□□□ -0.64
VRK3-201ENST00000316763 ARL6IP6Q8N6S5 226 aa11.03□□□□□ -0.64
VRK3-201ENST00000316763 Q8N9W7 124 aa11.03□□□□□ -0.64
VRK3-201ENST00000316763 ZC2HC1AQ96GY0 325 aa11.03□□□□□ -0.64
VRK3-201ENST00000316763 RABAC1Q9UI14 185 aa11.03□□□□□ -0.64
VRK3-201ENST00000316763 OR2T8A6NH00 312 aa11.03□□□□□ -0.64
VRK3-201ENST00000316763 LY6G6DO95868 133 aa11.03□□□□□ -0.64
VRK3-201ENST00000316763 CT45A10P0DMU9 189 aa11.03□□□□□ -0.64
VRK3-201ENST00000316763 EGR2P11161 476 aaPredicted RBP11.03□□□□□ -0.64
VRK3-201ENST00000316763 RIGQ13278 110 aa11.03□□□□□ -0.64
VRK3-201ENST00000316763 TDRG1Q3Y452 100 aa11.03□□□□□ -0.64
VRK3-201ENST00000316763 Q8N976 141 aa11.03□□□□□ -0.64
VRK3-201ENST00000316763 RNF114Q9Y508 228 aa11.03□□□□□ -0.64
VRK3-201ENST00000316763 A0A1B0GW15 77 aa11.02□□□□□ -0.65
VRK3-201ENST00000316763 FBLL1A6NHQ2 334 aaKnown RBP11.02□□□□□ -0.65
VRK3-201ENST00000316763 RAB4AP20338 218 aa11.02□□□□□ -0.65
VRK3-201ENST00000316763 Q6AWC8 147 aa11.02□□□□□ -0.65
VRK3-201ENST00000316763 FAM110DQ8TAY7 271 aaPredicted RBP11.02□□□□□ -0.65
VRK3-201ENST00000316763 PIFOQ8TCI5 191 aa11.02□□□□□ -0.65
VRK3-201ENST00000316763 A0A1B0GUT8 65 aa11.01□□□□□ -0.65
VRK3-201ENST00000316763 M0QZK8 103 aa11.01□□□□□ -0.65
VRK3-201ENST00000316763 FSHBP01225 129 aa11.01□□□□□ -0.65
VRK3-201ENST00000316763 IGHV3-23P01764 117 aa11.01□□□□□ -0.65
VRK3-201ENST00000316763 CHCHD1Q96BP2 118 aaKnown RBP11.01□□□□□ -0.65
VRK3-201ENST00000316763 NDFIP1Q9BT67 221 aa11.01□□□□□ -0.65
VRK3-201ENST00000316763 YAE1D1Q9NRH1 226 aa11.01□□□□□ -0.65
VRK3-201ENST00000316763 LOC102724200A0A096LPH7 203 aaPredicted RBP11.01□□□□□ -0.65
VRK3-201ENST00000316763 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.01□□□□□ -0.65
VRK3-201ENST00000316763 CTSGP08311 255 aa11.01□□□□□ -0.65
VRK3-201ENST00000316763 SSTP61278 116 aa11.01□□□□□ -0.65
VRK3-201ENST00000316763 PMCHL1Q16048 86 aa11.01□□□□□ -0.65
VRK3-201ENST00000316763 UNQ5815/PRO19632Q6UWF5 114 aa11.01□□□□□ -0.65
VRK3-201ENST00000316763 SNHG12Q9BXW3 62 aa11.01□□□□□ -0.65
VRK3-201ENST00000316763 FAM181BA6NEQ2 426 aa11□□□□□ -0.65
VRK3-201ENST00000316763 M0R3E3 92 aa11□□□□□ -0.65
VRK3-201ENST00000316763 EREGO14944 169 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms