RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 GPR183P32249 361 aa9.71□□□□□ -0.86
RNF4-201ENST00000314289 RBX1P62877 108 aa9.71□□□□□ -0.86
RNF4-201ENST00000314289 UBE2V1Q13404 147 aa9.71□□□□□ -0.86
RNF4-201ENST00000314289 C15orf32Q32M92 178 aa9.71□□□□□ -0.86
RNF4-201ENST00000314289 IGFL4Q6B9Z1 124 aa9.71□□□□□ -0.86
RNF4-201ENST00000314289 GOLT1AQ6ZVE7 132 aa9.71□□□□□ -0.86
RNF4-201ENST00000314289 ZNF469Q96JG9 3925 aaPredicted RBP9.71□□□□□ -0.86
RNF4-201ENST00000314289 IGHV3-66A0A0C4DH42 116 aa9.7□□□□□ -0.86
RNF4-201ENST00000314289 M0QZ24 198 aa9.7□□□□□ -0.86
RNF4-201ENST00000314289 GDF5OSQ5U4N7 250 aa9.7□□□□□ -0.86
RNF4-201ENST00000314289 OR4C5Q8NGB2 326 aa9.7□□□□□ -0.86
RNF4-201ENST00000314289 ALKBH7Q9BT30 221 aaPredicted RBP9.7□□□□□ -0.86
RNF4-201ENST00000314289 NUDT10Q8NFP7 164 aa9.7□□□□□ -0.86
RNF4-201ENST00000314289 NUDT11Q96G61 164 aa9.7□□□□□ -0.86
RNF4-201ENST00000314289 C7orf69Q9H7B7 122 aa9.7□□□□□ -0.86
RNF4-201ENST00000314289 C1RLQ9NZP8 487 aa9.7□□□□□ -0.86
RNF4-201ENST00000314289 SONP18583 2426 aaKnown RBP9.7□□□□□ -0.86
RNF4-201ENST00000314289 TRAV9-2A0A087WT02 112 aa9.69□□□□□ -0.86
RNF4-201ENST00000314289 TOMM40O96008 361 aa9.69□□□□□ -0.86
RNF4-201ENST00000314289 TCRAP04437 139 aa9.69□□□□□ -0.86
RNF4-201ENST00000314289 PAX8Q06710 450 aa9.69□□□□□ -0.86
RNF4-201ENST00000314289 VAMP3Q15836 100 aa9.69□□□□□ -0.86
RNF4-201ENST00000314289 NUP35Q8NFH5 326 aa9.69□□□□□ -0.86
RNF4-201ENST00000314289 SHANK2-AS3Q9BTD1 123 aa9.69□□□□□ -0.86
RNF4-201ENST00000314289 RNF24Q9Y225 148 aa9.69□□□□□ -0.86
RNF4-201ENST00000314289 IGHV3-49A0A0A0MS15 119 aa9.69□□□□□ -0.86
RNF4-201ENST00000314289 CTSGP08311 255 aa9.69□□□□□ -0.86
RNF4-201ENST00000314289 RHOGP84095 191 aa9.69□□□□□ -0.86
RNF4-201ENST00000314289 SRSF1Q07955 248 aaKnown RBP eCLIP9.69□□□□□ -0.864e-6■□□□□ 8.1
RNF4-201ENST00000314289 SPATA12Q7Z6I5 190 aa9.69□□□□□ -0.86
RNF4-201ENST00000314289 PRNTQ86SH4 94 aa9.69□□□□□ -0.86
RNF4-201ENST00000314289 CIARTQ8N365 385 aaPredicted RBP9.69□□□□□ -0.86
RNF4-201ENST00000314289 MRPS16Q9Y3D3 137 aaKnown RBP9.69□□□□□ -0.86
RNF4-201ENST00000314289 AVPP01185 164 aa9.69□□□□□ -0.86
RNF4-201ENST00000314289 HLA-DRB1P01911 266 aa9.69□□□□□ -0.86
RNF4-201ENST00000314289 CLEC3BP05452 202 aa9.69□□□□□ -0.86
RNF4-201ENST00000314289 HIST1H1EP10412 219 aaKnown RBP9.69□□□□□ -0.86
RNF4-201ENST00000314289 BPIFA4PQ86YQ2 179 aa9.69□□□□□ -0.86
RNF4-201ENST00000314289 C5orf17Q8NAS9 161 aa9.69□□□□□ -0.86
RNF4-201ENST00000314289 OR2D3Q8NGH3 330 aa9.69□□□□□ -0.86
RNF4-201ENST00000314289 IGHV1-69DA0A0B4J2H0 117 aa9.68□□□□□ -0.86
RNF4-201ENST00000314289 H3BRN7 92 aa9.68□□□□□ -0.86
RNF4-201ENST00000314289 ZNF207O43670 478 aaKnown RBP9.68□□□□□ -0.86
RNF4-201ENST00000314289 IGHV1-69P01742 117 aa9.68□□□□□ -0.86
RNF4-201ENST00000314289 FOXA3P55318 350 aaPredicted RBP9.68□□□□□ -0.86
RNF4-201ENST00000314289 THYN1Q9P016 225 aa9.68□□□□□ -0.86
RNF4-201ENST00000314289 TIMM8BQ9Y5J9 83 aaPredicted RBP9.68□□□□□ -0.86
RNF4-201ENST00000314289 HIGD1CA8MV81 97 aa9.68□□□□□ -0.86
RNF4-201ENST00000314289 CLEC19AQ6UXS0 136 aa9.68□□□□□ -0.86
RNF4-201ENST00000314289 ZNF843Q8N446 348 aa9.68□□□□□ -0.86
RNF4-201ENST00000314289 OR4F17Q8NGA8 305 aa9.68□□□□□ -0.86
RNF4-201ENST00000314289 H0Y8G0 127 aa9.67□□□□□ -0.86
RNF4-201ENST00000314289 PIFOQ8TCI5 191 aa9.67□□□□□ -0.86
RNF4-201ENST00000314289 HIF1ANQ9NWT6 349 aa9.67□□□□□ -0.86
RNF4-201ENST00000314289 APCP25054 2843 aa9.67□□□□□ -0.86
RNF4-201ENST00000314289 TRBV19A0A075B6N1 114 aa9.67□□□□□ -0.86
RNF4-201ENST00000314289 WI2-2373I1.2A0A1W2PRP0 233 aa9.67□□□□□ -0.86
RNF4-201ENST00000314289 TCF24Q7RTU0 167 aa9.67□□□□□ -0.86
RNF4-201ENST00000314289 C5orf56Q8N8D9 126 aa9.67□□□□□ -0.86
RNF4-201ENST00000314289 TENM4Q6N022 2769 aa9.67□□□□□ -0.86
RNF4-201ENST00000314289 MPV17L2Q567V2 206 aa9.67□□□□□ -0.86
RNF4-201ENST00000314289 GPR82Q96P67 336 aa9.67□□□□□ -0.86
RNF4-201ENST00000314289 CUBNO60494 3623 aa9.66□□□□□ -0.86
RNF4-201ENST00000314289 hDV102S1A0JD36 115 aa9.66□□□□□ -0.86
RNF4-201ENST00000314289 C2orf70A6NJV1 201 aa9.66□□□□□ -0.86
RNF4-201ENST00000314289 VWC2LB2RUY7 222 aa9.66□□□□□ -0.86
RNF4-201ENST00000314289 H3BUX3 64 aa9.66□□□□□ -0.86
RNF4-201ENST00000314289 KRTAP10-9P60411 292 aa9.66□□□□□ -0.86
RNF4-201ENST00000314289 Q6ZS46 218 aa9.66□□□□□ -0.86
RNF4-201ENST00000314289 LCNL1Q6ZST4 164 aa9.66□□□□□ -0.86
RNF4-201ENST00000314289 LINC00173Q6ZV60 143 aa9.66□□□□□ -0.86
RNF4-201ENST00000314289 MCRIP2Q9BUT9 160 aaKnown RBP9.66□□□□□ -0.86
RNF4-201ENST00000314289 MYO9AB2RTY4 2548 aa9.66□□□□□ -0.86
RNF4-201ENST00000314289 OR4C46A6NHA9 309 aa9.66□□□□□ -0.86
RNF4-201ENST00000314289 MSMBP08118 114 aa9.66□□□□□ -0.86
RNF4-201ENST00000314289 HLA-DMBP28068 263 aa9.66□□□□□ -0.86
RNF4-201ENST00000314289 SELENOKQ9Y6D0 94 aa9.66□□□□□ -0.86
RNF4-201ENST00000314289 COTL1Q14019 142 aa9.65□□□□□ -0.86
RNF4-201ENST00000314289 SIGLEC15Q6ZMC9 328 aa9.65□□□□□ -0.86
RNF4-201ENST00000314289 GRAMD2BQ96HH9 432 aa9.65□□□□□ -0.86
RNF4-201ENST00000314289 ZNF414Q96IQ9 312 aa9.65□□□□□ -0.86
RNF4-201ENST00000314289 OTORQ9NRC9 128 aa9.65□□□□□ -0.86
RNF4-201ENST00000314289 TRAV30A0A087WSZ9 112 aa9.65□□□□□ -0.86
RNF4-201ENST00000314289 CBY3A6NI87 242 aa9.65□□□□□ -0.86
RNF4-201ENST00000314289 FAM110DQ8TAY7 271 aaPredicted RBP9.65□□□□□ -0.86
RNF4-201ENST00000314289 TMEM70Q9BUB7 260 aa9.65□□□□□ -0.86
RNF4-201ENST00000314289 TMEM14CQ9P0S9 112 aa9.65□□□□□ -0.86
RNF4-201ENST00000314289 KLF12Q9Y4X4 402 aa9.65□□□□□ -0.86
RNF4-201ENST00000314289 MRPS12O15235 138 aaKnown RBP9.64□□□□□ -0.87
RNF4-201ENST00000314289 IGLV2-11P01706 119 aa9.64□□□□□ -0.87
RNF4-201ENST00000314289 BLCAPP62952 87 aa9.64□□□□□ -0.87
RNF4-201ENST00000314289 ANKRD39Q53RE8 183 aa9.64□□□□□ -0.87
RNF4-201ENST00000314289 CCDC140Q96MF4 163 aa9.64□□□□□ -0.87
RNF4-201ENST00000314289 LTAP01374 205 aa9.64□□□□□ -0.87
RNF4-201ENST00000314289 Q86TA4 180 aa9.64□□□□□ -0.87
RNF4-201ENST00000314289 MBD6Q96DN6 1003 aa9.64□□□□□ -0.87
RNF4-201ENST00000314289 MLST8Q9BVC4 326 aa9.64□□□□□ -0.87
RNF4-201ENST00000314289 NUDT3O95989 172 aa9.64□□□□□ -0.87
RNF4-201ENST00000314289 SAPCD1Q5SSQ6 148 aa9.64□□□□□ -0.87
RNF4-201ENST00000314289 WIPF2Q8TF74 440 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms