RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 CSN3P07498 182 aa4.82□□□□□ -1.64
SEC22A-201ENST00000309934 P0C879 139 aa4.82□□□□□ -1.64
SEC22A-201ENST00000309934 ADMP35318 185 aa4.82□□□□□ -1.64
SEC22A-201ENST00000309934 SH2D6Q7Z4S9 175 aa4.82□□□□□ -1.64
SEC22A-201ENST00000309934 TMEM86BQ8N661 226 aa4.82□□□□□ -1.64
SEC22A-201ENST00000309934 OR10J6PQ8NGY7 276 aa4.82□□□□□ -1.64
SEC22A-201ENST00000309934 KCNS1Q96KK3 526 aa4.82□□□□□ -1.64
SEC22A-201ENST00000309934 DUX3Q96PT4 197 aa4.82□□□□□ -1.64
SEC22A-201ENST00000309934 RPRMQ9NS64 109 aa4.82□□□□□ -1.64
SEC22A-201ENST00000309934 NCOA6Q14686 2063 aaPredicted RBP4.82□□□□□ -1.64
SEC22A-201ENST00000309934 IGHV3-72A0A0B4J1Y9 119 aa4.82□□□□□ -1.64
SEC22A-201ENST00000309934 A0A1B0GUS0 222 aa4.82□□□□□ -1.64
SEC22A-201ENST00000309934 WISP2O76076 250 aa4.82□□□□□ -1.64
SEC22A-201ENST00000309934 ORM2P19652 201 aa4.82□□□□□ -1.64
SEC22A-201ENST00000309934 ECSCRQ19T08 205 aa4.82□□□□□ -1.64
SEC22A-201ENST00000309934 TREML4Q6UXN2 200 aa4.82□□□□□ -1.64
SEC22A-201ENST00000309934 THAP8Q8NA92 274 aa4.82□□□□□ -1.64
SEC22A-201ENST00000309934 NPIPB3Q92617 1050 aa4.82□□□□□ -1.64
SEC22A-201ENST00000309934 MED12LQ86YW9 2145 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 CMYA5Q8N3K9 4069 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 A8MWV9 139 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 MYOD1P15172 320 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 RUNX1Q01196 453 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 MIC13Q5XKP0 118 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 TCF23Q7RTU1 214 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 VKORC1L1Q8N0U8 176 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 TTC9CQ8N5M4 171 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 OR8A1Q8NGG7 326 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 PRSS3P2Q8NHM4 247 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 MBD6Q96DN6 1003 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 PRADC1Q9BSG0 188 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 SH3BGRL3Q9H299 93 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 FBXL7Q9UJT9 491 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 DNAH1Q9P2D7 4330 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 LAMA3Q16787 3333 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 TRBV9A0A0B4J1U6 114 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 PAGE4O60829 102 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 HOXB4P17483 251 aaPredicted RBP4.81□□□□□ -1.64
SEC22A-201ENST00000309934 SRSF9Q13242 221 aaKnown RBP eCLIP4.81□□□□□ -1.64
SEC22A-201ENST00000309934 IBA57Q5T440 356 aaKnown RBP4.81□□□□□ -1.64
SEC22A-201ENST00000309934 HIST1H4GQ99525 98 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 FLNBO75369 2602 aaKnown RBP4.81□□□□□ -1.64
SEC22A-201ENST00000309934 MED12Q93074 2177 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 TRAV41A0A0B4J266 112 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 A0A1W2PPM0 123 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 ODF3BA8MYP8 253 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 NDUFA3O95167 84 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 TRACP01848 142 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 NPPCP23582 126 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 ZNF843Q8N446 348 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 FMC1Q96HJ9 113 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 DNAJC30Q96LL9 226 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 PRELID3AQ96N28 172 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 GPHA2Q96T91 129 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 OTORQ9NRC9 128 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 GTF3C1Q12789 2109 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 NCKAP5O14513 1909 aa4.81□□□□□ -1.64
SEC22A-201ENST00000309934 CHD9Q3L8U1 2897 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 A0A0G2JRQ6 117 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 FAM157AC9JC47 383 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 IGHV4-39P01824 125 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 HLA-DQA1P01909 254 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 GRNP28799 593 aaKnown RBP4.8□□□□□ -1.64
SEC22A-201ENST00000309934 ZNF134P52741 427 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 PDE6HQ13956 83 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 COA6Q5JTJ3 125 aaKnown RBP4.8□□□□□ -1.64
SEC22A-201ENST00000309934 ACTL10Q5JWF8 245 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 SFTA2Q6UW10 78 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 OR4X2Q8NGF9 303 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 BRK1Q8WUW1 75 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 MRPL27Q9P0M9 148 aaKnown RBP4.8□□□□□ -1.64
SEC22A-201ENST00000309934 ESPL1Q14674 2120 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 A0A1W2PRD5 423 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 A0A1W2PRF3 423 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 A0A1W2PRM7 423 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 TFF1P04155 84 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 GPX1P07203 203 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 SAA4P35542 130 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 PAX8Q06710 450 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 HCP5Q6MZN7 132 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 Q6ZRM9 215 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 NRGNQ92686 78 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 VGLL1Q99990 258 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 C11orf1Q9H5F2 150 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 INTS1Q8N201 2190 aaKnown RBP4.8□□□□□ -1.64
SEC22A-201ENST00000309934 TRAV40A0A0B4J280 105 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 H3BTX0 84 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 IGLV2-14P01704 120 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 PPIFP30405 207 aaKnown RBP4.8□□□□□ -1.64
SEC22A-201ENST00000309934 RPL15P61313 204 aaKnown RBP4.8□□□□□ -1.64
SEC22A-201ENST00000309934 EBI3Q14213 229 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 Q6AWC8 147 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 HRCT1Q6UXD1 115 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 TRAV8-4A0A0B4J246 113 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 hDV102S1A0JD36 115 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 ARL14EPLP0DKL9 152 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 CRYBB3P26998 211 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 C20orf173Q96LM9 149 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 RCHY1Q96PM5 261 aa4.8□□□□□ -1.64
SEC22A-201ENST00000309934 TMEM14CQ9P0S9 112 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms