RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 RAX2Q96IS3 184 aa13.31□□□□□ -0.28
KRT28-201ENST00000306658 C16orf92Q96LL3 132 aa13.31□□□□□ -0.28
KRT28-201ENST00000306658 IGF2BP2-AS1Q96M15 143 aa13.31□□□□□ -0.28
KRT28-201ENST00000306658 SMCO4Q9NRQ5 59 aa13.31□□□□□ -0.28
KRT28-201ENST00000306658 AURKAIP1Q9NWT8 199 aaPredicted RBP13.31□□□□□ -0.28
KRT28-201ENST00000306658 CCL24O00175 119 aa13.3□□□□□ -0.28
KRT28-201ENST00000306658 TSPAN4O14817 238 aa13.3□□□□□ -0.28
KRT28-201ENST00000306658 IGFL4Q6B9Z1 124 aa13.3□□□□□ -0.28
KRT28-201ENST00000306658 TMEM88Q6PEY1 159 aa13.3□□□□□ -0.28
KRT28-201ENST00000306658 TCF24Q7RTU0 167 aa13.3□□□□□ -0.28
KRT28-201ENST00000306658 CTDSP1Q9GZU7 261 aa13.3□□□□□ -0.28
KRT28-201ENST00000306658 TMEM242Q9NWH2 141 aa13.3□□□□□ -0.28
KRT28-201ENST00000306658 DNASE2O00115 360 aaPredicted RBP13.29□□□□□ -0.28
KRT28-201ENST00000306658 FOLR2P14207 255 aa13.29□□□□□ -0.28
KRT28-201ENST00000306658 EDN2P20800 178 aa13.29□□□□□ -0.28
KRT28-201ENST00000306658 FHL3Q13643 280 aa13.29□□□□□ -0.28
KRT28-201ENST00000306658 RNF212Q495C1 297 aa13.29□□□□□ -0.28
KRT28-201ENST00000306658 SAMD13Q5VXD3 122 aa13.29□□□□□ -0.28
KRT28-201ENST00000306658 LCN12Q6JVE5 192 aa13.29□□□□□ -0.28
KRT28-201ENST00000306658 CBLN2Q8IUK8 224 aa13.29□□□□□ -0.28
KRT28-201ENST00000306658 TMEM75Q8N9X5 138 aa13.29□□□□□ -0.28
KRT28-201ENST00000306658 OR9G4Q8NGQ1 327 aa13.29□□□□□ -0.28
KRT28-201ENST00000306658 DLX4Q92988 240 aaPredicted RBP13.29□□□□□ -0.28
KRT28-201ENST00000306658 ISOC2Q96AB3 205 aa13.29□□□□□ -0.28
KRT28-201ENST00000306658 MRPL53Q96EL3 112 aaKnown RBP13.29□□□□□ -0.28
KRT28-201ENST00000306658 SMIM12Q96EX1 92 aa13.29□□□□□ -0.28
KRT28-201ENST00000306658 FOXL1Q12952 345 aa13.28□□□□□ -0.28
KRT28-201ENST00000306658 ANAPC16Q96DE5 110 aa13.28□□□□□ -0.28
KRT28-201ENST00000306658 SGK494Q96LW2 274 aa13.28□□□□□ -0.28
KRT28-201ENST00000306658 NIPBLQ6KC79 2804 aaeCLIP13.28□□□□□ -0.28
KRT28-201ENST00000306658 TRAV8-2A0A0B4J237 113 aa13.28□□□□□ -0.28
KRT28-201ENST00000306658 TRBV6-1A0A0K0K1D8 114 aa13.28□□□□□ -0.28
KRT28-201ENST00000306658 FBLL1A6NHQ2 334 aaKnown RBP13.28□□□□□ -0.28
KRT28-201ENST00000306658 K7EN84 100 aa13.28□□□□□ -0.28
KRT28-201ENST00000306658 HLA-DMBP28068 263 aa13.28□□□□□ -0.28
KRT28-201ENST00000306658 PSG3Q16557 428 aa13.28□□□□□ -0.28
KRT28-201ENST00000306658 RNF182Q8N6D2 247 aa13.28□□□□□ -0.28
KRT28-201ENST00000306658 TUBA4BQ9H853 241 aa13.28□□□□□ -0.28
KRT28-201ENST00000306658 MLXQ9UH92 298 aa13.28□□□□□ -0.28
KRT28-201ENST00000306658 PPP1R2P9O14990 202 aa13.27□□□□□ -0.29
KRT28-201ENST00000306658 LTAP01374 205 aa13.27□□□□□ -0.29
KRT28-201ENST00000306658 IGLV2-8P01709 118 aa13.27□□□□□ -0.29
KRT28-201ENST00000306658 MGST1P10620 155 aaKnown RBP13.27□□□□□ -0.29
KRT28-201ENST00000306658 FLI1Q01543 452 aaPredicted RBP13.27□□□□□ -0.29
KRT28-201ENST00000306658 SFRP2Q96HF1 295 aa13.27□□□□□ -0.29
KRT28-201ENST00000306658 JMJD1CQ15652 2540 aa13.26□□□□□ -0.29
KRT28-201ENST00000306658 IGKV3-7A0A075B6H7 116 aa13.26□□□□□ -0.29
KRT28-201ENST00000306658 TRAV8-1A0A0A6YYK1 113 aa13.26□□□□□ -0.29
KRT28-201ENST00000306658 CXorf65A6NEN9 183 aa13.26□□□□□ -0.29
KRT28-201ENST00000306658 ZNF705FA8MVS1 300 aaPredicted RBP13.26□□□□□ -0.29
KRT28-201ENST00000306658 SOCS3O14543 225 aa13.26□□□□□ -0.29
KRT28-201ENST00000306658 GCGP01275 180 aa13.26□□□□□ -0.29
KRT28-201ENST00000306658 IGLV2-11P01706 119 aa13.26□□□□□ -0.29
KRT28-201ENST00000306658 PRNTQ86SH4 94 aa13.26□□□□□ -0.29
KRT28-201ENST00000306658 NDUFA11Q86Y39 141 aa13.26□□□□□ -0.29
KRT28-201ENST00000306658 ZFP30Q9Y2G7 519 aa13.26□□□□□ -0.29
KRT28-201ENST00000306658 RBAKDNA6NC62 111 aa13.25□□□□□ -0.29
KRT28-201ENST00000306658 ID1P41134 155 aa13.25□□□□□ -0.29
KRT28-201ENST00000306658 Q86TA4 180 aa13.25□□□□□ -0.29
KRT28-201ENST00000306658 NHLRC2Q8NBF2 726 aa13.25□□□□□ -0.29
KRT28-201ENST00000306658 BIN3Q9NQY0 253 aa13.25□□□□□ -0.29
KRT28-201ENST00000306658 PSG8Q9UQ74 426 aa13.25□□□□□ -0.29
KRT28-201ENST00000306658 H7BYZ3 331 aa13.24□□□□□ -0.29
KRT28-201ENST00000306658 OR5I1Q13606 314 aa13.24□□□□□ -0.29
KRT28-201ENST00000306658 NSUN5P1Q3KNT7 163 aa13.24□□□□□ -0.29
KRT28-201ENST00000306658 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.24□□□□□ -0.29
KRT28-201ENST00000306658 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.24□□□□□ -0.29
KRT28-201ENST00000306658 MLST8Q9BVC4 326 aa13.24□□□□□ -0.29
KRT28-201ENST00000306658 IGKV2-40A0A087WW87 121 aaPredicted RBP13.24□□□□□ -0.29
KRT28-201ENST00000306658 ADARB2-AS1A8MUL3 147 aa13.24□□□□□ -0.29
KRT28-201ENST00000306658 IGKV2D-40P01614 121 aaPredicted RBP13.24□□□□□ -0.29
KRT28-201ENST00000306658 ERVFC1-1P60608 527 aa13.24□□□□□ -0.29
KRT28-201ENST00000306658 ADAMTSL5Q6ZMM2 481 aa13.24□□□□□ -0.29
KRT28-201ENST00000306658 TMEM183AQ8IXX5 376 aa13.24□□□□□ -0.29
KRT28-201ENST00000306658 C15orf54Q8N8G6 183 aa13.24□□□□□ -0.29
KRT28-201ENST00000306658 OR10G8Q8NGN5 311 aa13.24□□□□□ -0.29
KRT28-201ENST00000306658 MS4A6AQ9H2W1 248 aa13.24□□□□□ -0.29
KRT28-201ENST00000306658 SELENOKQ9Y6D0 94 aa13.24□□□□□ -0.29
KRT28-201ENST00000306658 OVOL1O14753 267 aa13.23□□□□□ -0.29
KRT28-201ENST00000306658 CSN3P07498 182 aa13.23□□□□□ -0.29
KRT28-201ENST00000306658 KRTAP10-3P60369 221 aa13.23□□□□□ -0.29
KRT28-201ENST00000306658 PAFAH1B2P68402 229 aa13.23□□□□□ -0.29
KRT28-201ENST00000306658 GBGT1Q8N5D6 347 aa13.23□□□□□ -0.29
KRT28-201ENST00000306658 DCANP1Q8TF63 244 aa13.23□□□□□ -0.29
KRT28-201ENST00000306658 WNK1Q9H4A3 2382 aa13.22□□□□□ -0.29
KRT28-201ENST00000306658 PRB4P10163 310 aaPredicted RBP13.22□□□□□ -0.29
KRT28-201ENST00000306658 SAPCD1Q5SSQ6 148 aa13.22□□□□□ -0.29
KRT28-201ENST00000306658 ZNF738Q8NE65 137 aa13.22□□□□□ -0.29
KRT28-201ENST00000306658 DYNLRB2Q8TF09 96 aa13.22□□□□□ -0.29
KRT28-201ENST00000306658 OSTCQ9NRP0 149 aa13.22□□□□□ -0.29
KRT28-201ENST00000306658 PRAC2D3DTV9 90 aa13.21□□□□□ -0.29
KRT28-201ENST00000306658 IBA57Q5T440 356 aaKnown RBP13.21□□□□□ -0.29
KRT28-201ENST00000306658 WFDC3Q8IUB2 231 aa13.21□□□□□ -0.29
KRT28-201ENST00000306658 C20orf173Q96LM9 149 aa13.21□□□□□ -0.29
KRT28-201ENST00000306658 VGLL1Q99990 258 aa13.21□□□□□ -0.29
KRT28-201ENST00000306658 TEP1Q99973 2627 aaKnown RBP13.21□□□□□ -0.29
KRT28-201ENST00000306658 RBPMS2Q6ZRY4 209 aaKnown RBP13.21□□□□□ -0.3
KRT28-201ENST00000306658 S100PP25815 95 aa13.2□□□□□ -0.3
KRT28-201ENST00000306658 SNRPD3P62318 126 aaKnown RBP13.2□□□□□ -0.3
KRT28-201ENST00000306658 PRR27Q6MZM9 219 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms