RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 F6UB75 175 aa20.13■□□□□ 0.81
HDAC3-201ENST00000305264 DEFB125Q8N687 156 aa20.13■□□□□ 0.81
HDAC3-201ENST00000305264 CLEC5AQ9NY25 188 aa20.13■□□□□ 0.81
HDAC3-201ENST00000305264 PRAC2D3DTV9 90 aa20.12■□□□□ 0.81
HDAC3-201ENST00000305264 RPUSD4Q96CM3 377 aaKnown RBP20.12■□□□□ 0.81
HDAC3-201ENST00000305264 SUMO1P63165 101 aaKnown RBP20.12■□□□□ 0.81
HDAC3-201ENST00000305264 GDF5OSQ5U4N7 250 aa20.12■□□□□ 0.81
HDAC3-201ENST00000305264 CITED4Q96RK1 184 aa20.12■□□□□ 0.81
HDAC3-201ENST00000305264 KNCNA6PVL3 124 aa20.11■□□□□ 0.81
HDAC3-201ENST00000305264 ATP5G3P48201 142 aa20.11■□□□□ 0.81
HDAC3-201ENST00000305264 PPT1P50897 306 aa20.11■□□□□ 0.81
HDAC3-201ENST00000305264 CMC4P56277 68 aaPredicted RBP20.11■□□□□ 0.81
HDAC3-201ENST00000305264 CST9LP1Q5W188 147 aa20.11■□□□□ 0.81
HDAC3-201ENST00000305264 MRPL53Q96EL3 112 aaKnown RBP20.11■□□□□ 0.81
HDAC3-201ENST00000305264 MANBALQ9NQG1 85 aa20.11■□□□□ 0.81
HDAC3-201ENST00000305264 AURKAIP1Q9NWT8 199 aaPredicted RBP20.11■□□□□ 0.81
HDAC3-201ENST00000305264 ARL2-SNX15V9GYD0 113 aa20.11■□□□□ 0.81
HDAC3-201ENST00000305264 PRELID1Q9Y255 219 aa20.1■□□□□ 0.81
HDAC3-201ENST00000305264 RGS13O14921 159 aa20.09■□□□□ 0.81
HDAC3-201ENST00000305264 ZNF705DP0CH99 300 aaPredicted RBP20.09■□□□□ 0.81
HDAC3-201ENST00000305264 ZNF705BP0CI00 300 aaPredicted RBP20.09■□□□□ 0.81
HDAC3-201ENST00000305264 RAB14P61106 215 aa20.09■□□□□ 0.81
HDAC3-201ENST00000305264 GNG5P63218 68 aa20.09■□□□□ 0.81
HDAC3-201ENST00000305264 HAGHQ16775 308 aa20.09■□□□□ 0.81
HDAC3-201ENST00000305264 RPH3ALQ9UNE2 315 aa20.09■□□□□ 0.81
HDAC3-201ENST00000305264 SLC25A5P05141 298 aaKnown RBP20.08■□□□□ 0.81
HDAC3-201ENST00000305264 PMS2P11Q13670 270 aa20.08■□□□□ 0.81
HDAC3-201ENST00000305264 ACTL10Q5JWF8 245 aa20.08■□□□□ 0.81
HDAC3-201ENST00000305264 FOXI2Q6ZQN5 318 aa20.08■□□□□ 0.8
HDAC3-201ENST00000305264 CMTM2Q8TAZ6 248 aa20.08■□□□□ 0.8
HDAC3-201ENST00000305264 SAV1Q9H4B6 383 aaPredicted RBP20.08■□□□□ 0.8
HDAC3-201ENST00000305264 BCL2P10415 239 aa20.07■□□□□ 0.8
HDAC3-201ENST00000305264 C5orf17Q8NAS9 161 aa20.07■□□□□ 0.8
HDAC3-201ENST00000305264 A0A0J9YX75 114 aa20.06■□□□□ 0.8
HDAC3-201ENST00000305264 IFNA1P01562 189 aa20.06■□□□□ 0.8
HDAC3-201ENST00000305264 CLLU1Q5K131 121 aa20.06■□□□□ 0.8
HDAC3-201ENST00000305264 CCDC28AQ8IWP9 274 aa20.06■□□□□ 0.8
HDAC3-201ENST00000305264 NKX6-2Q9C056 277 aaPredicted RBP20.06■□□□□ 0.8
HDAC3-201ENST00000305264 IGKV2-40A0A087WW87 121 aaPredicted RBP20.06■□□□□ 0.8
HDAC3-201ENST00000305264 C11orf94C9JXX5 98 aa20.06■□□□□ 0.8
HDAC3-201ENST00000305264 IGKV2D-40P01614 121 aaPredicted RBP20.06■□□□□ 0.8
HDAC3-201ENST00000305264 CSN1S1P47710 185 aa20.06■□□□□ 0.8
HDAC3-201ENST00000305264 OR8A1Q8NGG7 326 aa20.06■□□□□ 0.8
HDAC3-201ENST00000305264 SRD5A3Q9H8P0 318 aa20.06■□□□□ 0.8
HDAC3-201ENST00000305264 DIRC3C9JPN6 131 aa20.05■□□□□ 0.8
HDAC3-201ENST00000305264 RXFP4Q8TDU9 374 aa20.05■□□□□ 0.8
HDAC3-201ENST00000305264 HLA-DRB4P13762 266 aa20.04■□□□□ 0.8
HDAC3-201ENST00000305264 HIST1H1AQ02539 215 aaPredicted RBP20.04■□□□□ 0.8
HDAC3-201ENST00000305264 EBLN2Q6P2I7 272 aa20.04■□□□□ 0.8
HDAC3-201ENST00000305264 RARRES2Q99969 163 aa20.04■□□□□ 0.8
HDAC3-201ENST00000305264 HLA-DRB4X5D2U9 266 aa20.04■□□□□ 0.8
HDAC3-201ENST00000305264 LOC102723971A0A1B0GUV8 181 aa20.04■□□□□ 0.8
HDAC3-201ENST00000305264 IGHV4-30-4P0DP06 118 aa20.04■□□□□ 0.8
HDAC3-201ENST00000305264 EPDR1Q9UM22 224 aa20.04■□□□□ 0.8
HDAC3-201ENST00000305264 H3BMM0 161 aa20.03■□□□□ 0.8
HDAC3-201ENST00000305264 K7EIL1 84 aa20.03■□□□□ 0.8
HDAC3-201ENST00000305264 TCRAP04437 139 aa20.03■□□□□ 0.8
HDAC3-201ENST00000305264 CNN1P51911 297 aaKnown RBP20.03■□□□□ 0.8
HDAC3-201ENST00000305264 MEF2BQ02080 365 aaPredicted RBP20.03■□□□□ 0.8
HDAC3-201ENST00000305264 TOR2AQ5JU69 321 aa20.03■□□□□ 0.8
HDAC3-201ENST00000305264 GOLT1AQ6ZVE7 132 aa20.03■□□□□ 0.8
HDAC3-201ENST00000305264 RBFOX3A6NFN3 312 aa20.02■□□□□ 0.8
HDAC3-201ENST00000305264 STHQ8IWL8 128 aa20.02■□□□□ 0.8
HDAC3-201ENST00000305264 FAM210AQ96ND0 272 aa20.02■□□□□ 0.8
HDAC3-201ENST00000305264 VGLL1Q99990 258 aa20.02■□□□□ 0.8
HDAC3-201ENST00000305264 VAX2Q9UIW0 290 aa20.02■□□□□ 0.8
HDAC3-201ENST00000305264 MEGF8Q7Z7M0 2845 aa20.02■□□□□ 0.79
HDAC3-201ENST00000305264 IGKV3-20P01619 116 aa20.01■□□□□ 0.79
HDAC3-201ENST00000305264 ERCC8Q13216 396 aa20.01■□□□□ 0.79
HDAC3-201ENST00000305264 OR10J6PQ8NGY7 276 aa20.01■□□□□ 0.79
HDAC3-201ENST00000305264 TRPT1Q86TN4 253 aaKnown RBP20.01■□□□□ 0.79
HDAC3-201ENST00000305264 ARL6IP6Q8N6S5 226 aa20.01■□□□□ 0.79
HDAC3-201ENST00000305264 OR4B1Q8NGF8 309 aa20.01■□□□□ 0.79
HDAC3-201ENST00000305264 ATG101Q9BSB4 218 aa20.01■□□□□ 0.79
HDAC3-201ENST00000305264 PEX7O00628 323 aa20■□□□□ 0.79
HDAC3-201ENST00000305264 TUBA4BQ9H853 241 aa20■□□□□ 0.79
HDAC3-201ENST00000305264 SCO2A0A1W2PP80 73 aa19.99■□□□□ 0.79
HDAC3-201ENST00000305264 RBMY1BA6NDE4 496 aaKnown RBP19.99■□□□□ 0.79
HDAC3-201ENST00000305264 RBMY1EA6NEQ0 496 aaKnown RBP19.99■□□□□ 0.79
HDAC3-201ENST00000305264 RBMY1DP0C7P1 496 aaKnown RBP19.99■□□□□ 0.79
HDAC3-201ENST00000305264 ZNF506Q5JVG8 444 aa19.99■□□□□ 0.79
HDAC3-201ENST00000305264 TRAV8-1A0A0A6YYK1 113 aa19.99■□□□□ 0.79
HDAC3-201ENST00000305264 NPIPB6E9PJ23 425 aa19.99■□□□□ 0.79
HDAC3-201ENST00000305264 RPL35AP18077 110 aaKnown RBP19.99■□□□□ 0.79
HDAC3-201ENST00000305264 TAGLN2P37802 199 aaKnown RBP19.99■□□□□ 0.79
HDAC3-201ENST00000305264 CYB561D1Q8N8Q1 229 aa19.99■□□□□ 0.79
HDAC3-201ENST00000305264 TXNDC17Q9BRA2 123 aa19.99■□□□□ 0.79
HDAC3-201ENST00000305264 EIF5A2Q9GZV4 153 aaKnown RBP19.99■□□□□ 0.79
HDAC3-201ENST00000305264 HIST1H2BAQ96A08 127 aa19.98■□□□□ 0.79
HDAC3-201ENST00000305264 TCEAL7Q9BRU2 100 aa19.98■□□□□ 0.79
HDAC3-201ENST00000305264 AGPAT4-IT1Q9H0P7 198 aa19.98■□□□□ 0.79
HDAC3-201ENST00000305264 RBAKDNA6NC62 111 aa19.97■□□□□ 0.79
HDAC3-201ENST00000305264 SGK494Q96LW2 274 aa19.97■□□□□ 0.79
HDAC3-201ENST00000305264 LINC00479Q96M42 142 aa19.97■□□□□ 0.79
HDAC3-201ENST00000305264 DUSP14O95147 198 aaKnown RBP19.97■□□□□ 0.79
HDAC3-201ENST00000305264 C9orf47Q6ZRZ4 202 aa19.97■□□□□ 0.79
HDAC3-201ENST00000305264 A8MTW9 85 aa19.96■□□□□ 0.79
HDAC3-201ENST00000305264 Q8TAT8 98 aa19.96■□□□□ 0.79
HDAC3-201ENST00000305264 AMTNQ6UX39 209 aa19.95■□□□□ 0.78
HDAC3-201ENST00000305264 ASCL2Q99929 193 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 300.5 ms