RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 GLMPQ8WWB7 406 aa17.05■□□□□ 0.32
SMAD1-201ENST00000302085 GRAMD2BQ96HH9 432 aa17.05■□□□□ 0.32
SMAD1-201ENST00000302085 ZNF492Q9P255 531 aa17.05■□□□□ 0.32
SMAD1-201ENST00000302085 C19orf71A6NCJ1 209 aa17.04■□□□□ 0.32
SMAD1-201ENST00000302085 ZNF705FA8MVS1 300 aaPredicted RBP17.04■□□□□ 0.32
SMAD1-201ENST00000302085 TCL1AP56279 114 aa17.04■□□□□ 0.32
SMAD1-201ENST00000302085 ZFP30Q9Y2G7 519 aa17.04■□□□□ 0.32
SMAD1-201ENST00000302085 CHEK1O14757 476 aa17.04■□□□□ 0.32
SMAD1-201ENST00000302085 ACTL10Q5JWF8 245 aa17.04■□□□□ 0.32
SMAD1-201ENST00000302085 IGKV2-40A0A087WW87 121 aaPredicted RBP17.03■□□□□ 0.32
SMAD1-201ENST00000302085 SERTM2A0A1B0GWG4 89 aa17.03■□□□□ 0.32
SMAD1-201ENST00000302085 IGKV2D-40P01614 121 aaPredicted RBP17.03■□□□□ 0.32
SMAD1-201ENST00000302085 ELANEP08246 267 aa17.03■□□□□ 0.32
SMAD1-201ENST00000302085 LCN12Q6JVE5 192 aa17.03■□□□□ 0.32
SMAD1-201ENST00000302085 MYOZ3Q8TDC0 251 aa17.03■□□□□ 0.32
SMAD1-201ENST00000302085 FRMD6-AS1P0C7T7 363 aa17.02■□□□□ 0.32
SMAD1-201ENST00000302085 TRAV8-2A0A0B4J237 113 aa17.02■□□□□ 0.31
SMAD1-201ENST00000302085 NDUFA6P56556 154 aa17.02■□□□□ 0.31
SMAD1-201ENST00000302085 RNF182Q8N6D2 247 aa17.02■□□□□ 0.31
SMAD1-201ENST00000302085 ZC2HC1AQ96GY0 325 aa17.02■□□□□ 0.31
SMAD1-201ENST00000302085 SLC50A1Q9BRV3 221 aa17.02■□□□□ 0.31
SMAD1-201ENST00000302085 SONP18583 2426 aaKnown RBP17.02■□□□□ 0.31
SMAD1-201ENST00000302085 FABP9Q0Z7S8 132 aa17.01■□□□□ 0.31
SMAD1-201ENST00000302085 TM4SF20Q53R12 229 aa17.01■□□□□ 0.31
SMAD1-201ENST00000302085 C8orf86Q6ZUL3 223 aa17■□□□□ 0.31
SMAD1-201ENST00000302085 GPHB5Q86YW7 130 aa17■□□□□ 0.31
SMAD1-201ENST00000302085 RNF152Q8N8N0 203 aa17■□□□□ 0.31
SMAD1-201ENST00000302085 VGLL1Q99990 258 aa17■□□□□ 0.31
SMAD1-201ENST00000302085 TRAPPC1Q9Y5R8 145 aa17■□□□□ 0.31
SMAD1-201ENST00000302085 DNAJC9-AS1A6NH13 148 aa17■□□□□ 0.31
SMAD1-201ENST00000302085 PRAC2D3DTV9 90 aa17■□□□□ 0.31
SMAD1-201ENST00000302085 UBE2CO00762 179 aa17■□□□□ 0.31
SMAD1-201ENST00000302085 SPINK4O60575 86 aa17■□□□□ 0.31
SMAD1-201ENST00000302085 MEOX2P50222 304 aa17■□□□□ 0.31
SMAD1-201ENST00000302085 RPP21Q9H633 154 aaKnown RBP17■□□□□ 0.31
SMAD1-201ENST00000302085 P01737 135 aa16.99■□□□□ 0.31
SMAD1-201ENST00000302085 FAM106AQ4KMX7 169 aa16.99■□□□□ 0.31
SMAD1-201ENST00000302085 TSKUQ8WUA8 353 aa16.99■□□□□ 0.31
SMAD1-201ENST00000302085 DAZAP1Q96EP5 407 aaKnown RBP16.99■□□□□ 0.31
SMAD1-201ENST00000302085 C8orf49Q96NF6 230 aa16.99■□□□□ 0.31
SMAD1-201ENST00000302085 FASNP49327 2511 aaKnown RBP16.99■□□□□ 0.31
SMAD1-201ENST00000302085 ACANP16112 2415 aa16.99■□□□□ 0.31
SMAD1-201ENST00000302085 HECTD1Q9ULT8 2610 aa16.99■□□□□ 0.31
SMAD1-201ENST00000302085 IGHV7-4-1A0A0J9YVY3 117 aa16.98■□□□□ 0.31
SMAD1-201ENST00000302085 IZUMO1RA6ND01 250 aa16.98■□□□□ 0.31
SMAD1-201ENST00000302085 GBGT1Q8N5D6 347 aa16.98■□□□□ 0.31
SMAD1-201ENST00000302085 A0A1W2PS18 150 aa16.98■□□□□ 0.31
SMAD1-201ENST00000302085 K7EMT4 169 aa16.98■□□□□ 0.31
SMAD1-201ENST00000302085 CRIP1P50238 77 aa16.98■□□□□ 0.31
SMAD1-201ENST00000302085 ESM1Q9NQ30 184 aa16.98■□□□□ 0.31
SMAD1-201ENST00000302085 DAZ1Q9NQZ3 744 aaKnown RBP16.98■□□□□ 0.31
SMAD1-201ENST00000302085 FAM181BA6NEQ2 426 aa16.97■□□□□ 0.31
SMAD1-201ENST00000302085 NPIPB6E9PJ23 425 aa16.97■□□□□ 0.31
SMAD1-201ENST00000302085 LGALS1P09382 135 aaKnown RBP16.97■□□□□ 0.31
SMAD1-201ENST00000302085 CBLN1P23435 193 aa16.97■□□□□ 0.31
SMAD1-201ENST00000302085 UBE2E2Q96LR5 201 aa16.97■□□□□ 0.31
SMAD1-201ENST00000302085 RHPN1-AS1Q9BWJ2 59 aa16.97■□□□□ 0.31
SMAD1-201ENST00000302085 HOXA5P20719 270 aa16.97■□□□□ 0.31
SMAD1-201ENST00000302085 NEU1Q99519 415 aa16.97■□□□□ 0.31
SMAD1-201ENST00000302085 SMPXQ9UHP9 88 aa16.97■□□□□ 0.31
SMAD1-201ENST00000302085 FBLL1A6NHQ2 334 aaKnown RBP16.96■□□□□ 0.31
SMAD1-201ENST00000302085 EDN2P20800 178 aa16.96■□□□□ 0.31
SMAD1-201ENST00000302085 ERCC8Q13216 396 aa16.96■□□□□ 0.31
SMAD1-201ENST00000302085 CT83Q5H943 113 aa16.96■□□□□ 0.31
SMAD1-201ENST00000302085 NUP35Q8NFH5 326 aa16.96■□□□□ 0.31
SMAD1-201ENST00000302085 PRR25Q96S07 402 aa16.96■□□□□ 0.31
SMAD1-201ENST00000302085 Q6ZSV7 163 aa16.95■□□□□ 0.3
SMAD1-201ENST00000302085 NAT8BQ9UHF3 227 aa16.95■□□□□ 0.3
SMAD1-201ENST00000302085 SMUG1Q53HV7 270 aa16.95■□□□□ 0.3
SMAD1-201ENST00000302085 SAPCD1Q5SSQ6 148 aa16.95■□□□□ 0.3
SMAD1-201ENST00000302085 MRPL54Q6P161 138 aaKnown RBP16.95■□□□□ 0.3
SMAD1-201ENST00000302085 COX8CQ7Z4L0 72 aa16.95■□□□□ 0.3
SMAD1-201ENST00000302085 KLHDC1Q8N7A1 406 aa16.95■□□□□ 0.3
SMAD1-201ENST00000302085 Q8TAT8 98 aa16.95■□□□□ 0.3
SMAD1-201ENST00000302085 C16orf92Q96LL3 132 aa16.95■□□□□ 0.3
SMAD1-201ENST00000302085 RBAKDNA6NC62 111 aa16.94■□□□□ 0.3
SMAD1-201ENST00000302085 A8MWL6 223 aa16.94■□□□□ 0.3
SMAD1-201ENST00000302085 TCF24Q7RTU0 167 aa16.94■□□□□ 0.3
SMAD1-201ENST00000302085 MRPL53Q96EL3 112 aaKnown RBP16.94■□□□□ 0.3
SMAD1-201ENST00000302085 HIGD1CA8MV81 97 aa16.93■□□□□ 0.3
SMAD1-201ENST00000302085 AKR1D1P51857 326 aa16.93■□□□□ 0.3
SMAD1-201ENST00000302085 OR4B1Q8NGF8 309 aa16.93■□□□□ 0.3
SMAD1-201ENST00000302085 GTSF1Q8WW33 167 aa16.93■□□□□ 0.3
SMAD1-201ENST00000302085 C20orf173Q96LM9 149 aa16.93■□□□□ 0.3
SMAD1-201ENST00000302085 GNB1LQ9BYB4 327 aa16.93■□□□□ 0.3
SMAD1-201ENST00000302085 UFC1Q9Y3C8 167 aa16.93■□□□□ 0.3
SMAD1-201ENST00000302085 IGHV4OR15-8A0A075B7B6 117 aa16.93■□□□□ 0.3
SMAD1-201ENST00000302085 A0A087WW49 117 aa16.93■□□□□ 0.3
SMAD1-201ENST00000302085 SOCS3O14543 225 aa16.93■□□□□ 0.3
SMAD1-201ENST00000302085 RPL19P84098 196 aaKnown RBP16.93■□□□□ 0.3
SMAD1-201ENST00000302085 GFI1BQ5VTD9 330 aa16.93■□□□□ 0.3
SMAD1-201ENST00000302085 TMEM136Q6ZRR5 245 aa16.93■□□□□ 0.3
SMAD1-201ENST00000302085 OR2D3Q8NGH3 330 aa16.93■□□□□ 0.3
SMAD1-201ENST00000302085 SMR3AQ99954 134 aa16.93■□□□□ 0.3
SMAD1-201ENST00000302085 MRPL18Q9H0U6 180 aaKnown RBP16.93■□□□□ 0.3
SMAD1-201ENST00000302085 C18orf65Q6ZTR6 163 aa16.92■□□□□ 0.3
SMAD1-201ENST00000302085 GPR61Q9BZJ8 451 aa16.92■□□□□ 0.3
SMAD1-201ENST00000302085 SELENOKQ9Y6D0 94 aa16.92■□□□□ 0.3
SMAD1-201ENST00000302085 SNURFLB1AK76 121 aa16.91■□□□□ 0.3
SMAD1-201ENST00000302085 TCTEX1D4Q5JR98 221 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms