RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 FAM71F2Q6NXP2 309 aa10.64□□□□□ -0.71
CTTN-201ENST00000301843 SCNM1Q9BWG6 230 aa10.64□□□□□ -0.71
CTTN-201ENST00000301843 NCBP2LA6PVI3 153 aaKnown RBP10.64□□□□□ -0.71
CTTN-201ENST00000301843 RIGQ13278 110 aa10.64□□□□□ -0.71
CTTN-201ENST00000301843 SHANK2-AS3Q9BTD1 123 aa10.64□□□□□ -0.71
CTTN-201ENST00000301843 IGHV3-49A0A0A0MS15 119 aa10.63□□□□□ -0.71
CTTN-201ENST00000301843 K7EP13 123 aa10.63□□□□□ -0.71
CTTN-201ENST00000301843 TMEM11P17152 192 aa10.63□□□□□ -0.71
CTTN-201ENST00000301843 DEFB125Q8N687 156 aa10.63□□□□□ -0.71
CTTN-201ENST00000301843 Q8NA96 180 aa10.63□□□□□ -0.71
CTTN-201ENST00000301843 ZNF414Q96IQ9 312 aa10.63□□□□□ -0.71
CTTN-201ENST00000301843 GFRA4Q9GZZ7 299 aa10.63□□□□□ -0.71
CTTN-201ENST00000301843 C1RLQ9NZP8 487 aa10.63□□□□□ -0.71
CTTN-201ENST00000301843 THYN1Q9P016 225 aa10.63□□□□□ -0.71
CTTN-201ENST00000301843 NMUP48645 174 aa10.63□□□□□ -0.71
CTTN-201ENST00000301843 PET117Q6UWS5 81 aa10.63□□□□□ -0.71
CTTN-201ENST00000301843 C7orf71A4D174 169 aa10.62□□□□□ -0.71
CTTN-201ENST00000301843 SH2D1AO60880 128 aa10.62□□□□□ -0.71
CTTN-201ENST00000301843 CT45A10P0DMU9 189 aa10.62□□□□□ -0.71
CTTN-201ENST00000301843 EVI2AP22794 236 aa10.62□□□□□ -0.71
CTTN-201ENST00000301843 ZNF80P51504 273 aaPredicted RBP10.62□□□□□ -0.71
CTTN-201ENST00000301843 OR10AG1Q8NH19 301 aa10.62□□□□□ -0.71
CTTN-201ENST00000301843 PRELID3AQ96N28 172 aa10.62□□□□□ -0.71
CTTN-201ENST00000301843 VGLL1Q99990 258 aa10.62□□□□□ -0.71
CTTN-201ENST00000301843 SPG11Q96JI7 2443 aa10.62□□□□□ -0.71
CTTN-201ENST00000301843 PLP1P60201 277 aa10.62□□□□□ -0.71
CTTN-201ENST00000301843 RBPJQ06330 500 aa10.62□□□□□ -0.71
CTTN-201ENST00000301843 TWIST1Q15672 202 aa10.62□□□□□ -0.71
CTTN-201ENST00000301843 LINC01545Q5VT33 79 aa10.62□□□□□ -0.71
CTTN-201ENST00000301843 PCP2Q8IVA1 136 aa10.62□□□□□ -0.71
CTTN-201ENST00000301843 CST9LQ9H4G1 147 aa10.62□□□□□ -0.71
CTTN-201ENST00000301843 SOX21Q9Y651 276 aaPredicted RBP10.62□□□□□ -0.71
CTTN-201ENST00000301843 H3BRN7 92 aa10.62□□□□□ -0.71
CTTN-201ENST00000301843 SAP30O75446 220 aa10.62□□□□□ -0.71
CTTN-201ENST00000301843 GATA1P15976 413 aaPredicted RBP10.62□□□□□ -0.71
CTTN-201ENST00000301843 NDPQ00604 133 aa10.62□□□□□ -0.71
CTTN-201ENST00000301843 FAM162BQ5T6X4 162 aa10.62□□□□□ -0.71
CTTN-201ENST00000301843 ASCL5Q7RTU5 278 aa10.62□□□□□ -0.71
CTTN-201ENST00000301843 C8orf31Q8N9H6 132 aa10.62□□□□□ -0.71
CTTN-201ENST00000301843 RABAC1Q9UI14 185 aa10.62□□□□□ -0.71
CTTN-201ENST00000301843 TMEM189A5PLL7 270 aa10.61□□□□□ -0.71
CTTN-201ENST00000301843 SMIM12Q96EX1 92 aa10.61□□□□□ -0.71
CTTN-201ENST00000301843 TRAV30A0A087WSZ9 112 aa10.61□□□□□ -0.71
CTTN-201ENST00000301843 NPYP01303 97 aa10.61□□□□□ -0.71
CTTN-201ENST00000301843 CSN1S1P47710 185 aa10.61□□□□□ -0.71
CTTN-201ENST00000301843 ERCC8Q13216 396 aa10.61□□□□□ -0.71
CTTN-201ENST00000301843 C12orf54Q6X4T0 127 aa10.61□□□□□ -0.71
CTTN-201ENST00000301843 DKK2Q9UBU2 259 aa10.61□□□□□ -0.71
CTTN-201ENST00000301843 SPTBN4Q9H254 2564 aa10.61□□□□□ -0.71
CTTN-201ENST00000301843 FAM231BA6NCW3 169 aa10.6□□□□□ -0.71
CTTN-201ENST00000301843 EGR2P11161 476 aaPredicted RBP10.6□□□□□ -0.71
CTTN-201ENST00000301843 MRPL51Q4U2R6 128 aaKnown RBP10.6□□□□□ -0.71
CTTN-201ENST00000301843 K7EQM0 130 aa10.6□□□□□ -0.71
CTTN-201ENST00000301843 KAAG1Q9UBP8 84 aa10.6□□□□□ -0.71
CTTN-201ENST00000301843 VSTM5A8MXK1 200 aa10.6□□□□□ -0.71
CTTN-201ENST00000301843 SPRY2O43597 315 aa10.6□□□□□ -0.71
CTTN-201ENST00000301843 COX8AP10176 69 aa10.6□□□□□ -0.71
CTTN-201ENST00000301843 HIST1H1AQ02539 215 aaPredicted RBP10.6□□□□□ -0.71
CTTN-201ENST00000301843 RNF182Q8N6D2 247 aa10.6□□□□□ -0.71
CTTN-201ENST00000301843 TMEM14CQ9P0S9 112 aa10.6□□□□□ -0.71
CTTN-201ENST00000301843 H3BUT2 72 aa10.59□□□□□ -0.71
CTTN-201ENST00000301843 ORM1P02763 201 aa10.59□□□□□ -0.71
CTTN-201ENST00000301843 CKS2P33552 79 aa10.59□□□□□ -0.71
CTTN-201ENST00000301843 PVRIGQ6DKI7 326 aa10.59□□□□□ -0.71
CTTN-201ENST00000301843 Q6ZQT7 251 aa10.59□□□□□ -0.71
CTTN-201ENST00000301843 JMJD8Q96S16 334 aa10.59□□□□□ -0.71
CTTN-201ENST00000301843 AAMDCQ9H7C9 122 aa10.59□□□□□ -0.71
CTTN-201ENST00000301843 GAGE12BA1L429 117 aa10.59□□□□□ -0.71
CTTN-201ENST00000301843 HOXB4P17483 251 aaPredicted RBP10.59□□□□□ -0.71
CTTN-201ENST00000301843 TMEM97Q5BJF2 176 aa10.59□□□□□ -0.71
CTTN-201ENST00000301843 DYNAPQ8N1N2 210 aa10.59□□□□□ -0.71
CTTN-201ENST00000301843 ZNF207O43670 478 aaKnown RBP10.59□□□□□ -0.71
CTTN-201ENST00000301843 OCIAD2Q56VL3 154 aa10.59□□□□□ -0.71
CTTN-201ENST00000301843 CRYBG3Q68DQ2 2970 aa10.58□□□□□ -0.71
CTTN-201ENST00000301843 MRPS12O15235 138 aaKnown RBP10.58□□□□□ -0.72
CTTN-201ENST00000301843 CD3EP07766 207 aa10.58□□□□□ -0.72
CTTN-201ENST00000301843 APOBEC3AP31941 199 aaPredicted RBP10.58□□□□□ -0.72
CTTN-201ENST00000301843 RIPPLY3P57055 190 aa10.58□□□□□ -0.72
CTTN-201ENST00000301843 CDSNQ15517 529 aa10.58□□□□□ -0.72
CTTN-201ENST00000301843 NBR2O15453 112 aa10.58□□□□□ -0.72
CTTN-201ENST00000301843 ZNF672Q499Z4 452 aaPredicted RBP10.58□□□□□ -0.72
CTTN-201ENST00000301843 C16orf54Q6UWD8 224 aa10.58□□□□□ -0.72
CTTN-201ENST00000301843 FANCD2OSQ96PS1 177 aa10.58□□□□□ -0.72
CTTN-201ENST00000301843 PRAC2D3DTV9 90 aa10.57□□□□□ -0.72
CTTN-201ENST00000301843 J3KRW8 73 aa10.57□□□□□ -0.72
CTTN-201ENST00000301843 FAM104BQ5XKR9 115 aa10.57□□□□□ -0.72
CTTN-201ENST00000301843 NBL1P41271 181 aa10.57□□□□□ -0.72
CTTN-201ENST00000301843 CDKN1BP46527 198 aa10.57□□□□□ -0.72
CTTN-201ENST00000301843 ORMDL3Q8N138 153 aa10.57□□□□□ -0.72
CTTN-201ENST00000301843 F8W735 103 aaPredicted RBP10.56□□□□□ -0.72
CTTN-201ENST00000301843 FGF6P10767 208 aa10.56□□□□□ -0.72
CTTN-201ENST00000301843 CD5LO43866 347 aa10.56□□□□□ -0.72
CTTN-201ENST00000301843 GAGE10A6NGK3 116 aa10.55□□□□□ -0.72
CTTN-201ENST00000301843 DEFB104AQ8WTQ1 72 aa10.55□□□□□ -0.72
CTTN-201ENST00000301843 MS4A6AQ9H2W1 248 aa10.55□□□□□ -0.72
CTTN-201ENST00000301843 PRR25Q96S07 402 aa10.55□□□□□ -0.72
CTTN-201ENST00000301843 DPM3Q9P2X0 92 aa10.55□□□□□ -0.72
CTTN-201ENST00000301843 IGKV2D-26A0A0A0MRZ7 120 aa10.55□□□□□ -0.72
CTTN-201ENST00000301843 TRAV26-2A0A0B4J265 109 aa10.55□□□□□ -0.72
CTTN-201ENST00000301843 LY6LH3BQJ8 138 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms