RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 VMA21Q3ZAQ7 101 aa8.58□□□□□ -1.04
ZNF558-201ENST00000301475 CD300EQ496F6 205 aaPredicted RBP8.58□□□□□ -1.04
ZNF558-201ENST00000301475 CCDC144NLQ6NUI1 221 aa8.58□□□□□ -1.04
ZNF558-201ENST00000301475 TMEM108Q6UXF1 575 aa8.58□□□□□ -1.04
ZNF558-201ENST00000301475 FOXI2Q6ZQN5 318 aa8.58□□□□□ -1.04
ZNF558-201ENST00000301475 FER1L6-AS2Q96M78 137 aa8.58□□□□□ -1.04
ZNF558-201ENST00000301475 HHLA3Q9XRX5 114 aa8.58□□□□□ -1.04
ZNF558-201ENST00000301475 ADGRG4Q8IZF6 3080 aa8.58□□□□□ -1.04
ZNF558-201ENST00000301475 PRR33A8MZF0 331 aa8.58□□□□□ -1.04
ZNF558-201ENST00000301475 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.58□□□□□ -1.04
ZNF558-201ENST00000301475 ATP6V0BQ99437 205 aa8.58□□□□□ -1.04
ZNF558-201ENST00000301475 CT45A10P0DMU9 189 aa8.57□□□□□ -1.04
ZNF558-201ENST00000301475 ODF1Q14990 250 aa8.57□□□□□ -1.04
ZNF558-201ENST00000301475 TMEM200BQ69YZ2 307 aa8.57□□□□□ -1.04
ZNF558-201ENST00000301475 ZNF562Q6V9R5 426 aa8.57□□□□□ -1.04
ZNF558-201ENST00000301475 SH2D6Q7Z4S9 175 aa8.57□□□□□ -1.04
ZNF558-201ENST00000301475 HIGD1BQ9P298 99 aa8.57□□□□□ -1.04
ZNF558-201ENST00000301475 TRBV25-1A0A075B6N4 114 aa8.57□□□□□ -1.04
ZNF558-201ENST00000301475 GAS8-AS1O95177 125 aa8.57□□□□□ -1.04
ZNF558-201ENST00000301475 RPL27AP46776 148 aaKnown RBP8.57□□□□□ -1.04
ZNF558-201ENST00000301475 WFDC12Q8WWY7 111 aa8.57□□□□□ -1.04
ZNF558-201ENST00000301475 ARPC1AQ92747 370 aa8.57□□□□□ -1.04
ZNF558-201ENST00000301475 SPATA25Q9BR10 227 aa8.57□□□□□ -1.04
ZNF558-201ENST00000301475 NGBQ9NPG2 151 aa8.57□□□□□ -1.04
ZNF558-201ENST00000301475 PROCRQ9UNN8 238 aa8.57□□□□□ -1.04
ZNF558-201ENST00000301475 NCOR2Q9Y618 2525 aa8.57□□□□□ -1.04
ZNF558-201ENST00000301475 A0A1B0GV72 72 aa8.56□□□□□ -1.04
ZNF558-201ENST00000301475 TEX36Q5VZQ5 186 aa8.56□□□□□ -1.04
ZNF558-201ENST00000301475 MTURNQ8N3F0 131 aa8.56□□□□□ -1.04
ZNF558-201ENST00000301475 FAM169BQ8N8A8 192 aa8.56□□□□□ -1.04
ZNF558-201ENST00000301475 PIFOQ8TCI5 191 aa8.56□□□□□ -1.04
ZNF558-201ENST00000301475 A0A1W2PRD5 423 aa8.56□□□□□ -1.04
ZNF558-201ENST00000301475 A0A1W2PRF3 423 aa8.56□□□□□ -1.04
ZNF558-201ENST00000301475 A0A1W2PRM7 423 aa8.56□□□□□ -1.04
ZNF558-201ENST00000301475 E9PLD3 99 aa8.56□□□□□ -1.04
ZNF558-201ENST00000301475 ENSAO43768 121 aaKnown RBP8.56□□□□□ -1.04
ZNF558-201ENST00000301475 IGKV1-17P01599 117 aa8.56□□□□□ -1.04
ZNF558-201ENST00000301475 CKS2P33552 79 aa8.56□□□□□ -1.04
ZNF558-201ENST00000301475 ETDBQ3ZM63 59 aa8.56□□□□□ -1.04
ZNF558-201ENST00000301475 SPAG8Q99932 426 aaPredicted RBP8.56□□□□□ -1.04
ZNF558-201ENST00000301475 ZMAT4Q9H898 229 aa8.56□□□□□ -1.04
ZNF558-201ENST00000301475 H3BMG7 143 aa8.56□□□□□ -1.04
ZNF558-201ENST00000301475 SH2D1AO60880 128 aa8.56□□□□□ -1.04
ZNF558-201ENST00000301475 PRSS33Q8NF86 280 aa8.56□□□□□ -1.04
ZNF558-201ENST00000301475 INSL3P51460 131 aa8.55□□□□□ -1.04
ZNF558-201ENST00000301475 CCL8P80075 99 aa8.55□□□□□ -1.04
ZNF558-201ENST00000301475 SEM1Q6ZVN7 128 aa8.55□□□□□ -1.04
ZNF558-201ENST00000301475 GTSCR1Q86UQ5 136 aa8.55□□□□□ -1.04
ZNF558-201ENST00000301475 CEND1Q8N111 149 aa8.55□□□□□ -1.04
ZNF558-201ENST00000301475 TM2D2Q9BX73 214 aa8.55□□□□□ -1.04
ZNF558-201ENST00000301475 TLN1Q9Y490 2541 aaKnown RBP8.55□□□□□ -1.04
ZNF558-201ENST00000301475 IGLL5B9A064 214 aa8.55□□□□□ -1.04
ZNF558-201ENST00000301475 TEX22C9J3V5 150 aa8.55□□□□□ -1.04
ZNF558-201ENST00000301475 RBP4P02753 201 aa8.55□□□□□ -1.04
ZNF558-201ENST00000301475 AMTNQ6UX39 209 aa8.55□□□□□ -1.04
ZNF558-201ENST00000301475 SHANK2-AS3Q9BTD1 123 aa8.55□□□□□ -1.04
ZNF558-201ENST00000301475 H3BRN7 92 aa8.54□□□□□ -1.04
ZNF558-201ENST00000301475 K7EQM0 130 aa8.54□□□□□ -1.04
ZNF558-201ENST00000301475 MRPS12O15235 138 aaKnown RBP8.54□□□□□ -1.04
ZNF558-201ENST00000301475 RAB9AP51151 201 aa8.54□□□□□ -1.04
ZNF558-201ENST00000301475 RASL11BQ9BPW5 248 aa8.54□□□□□ -1.04
ZNF558-201ENST00000301475 SCNM1Q9BWG6 230 aa8.54□□□□□ -1.04
ZNF558-201ENST00000301475 F8W1H4 67 aa8.54□□□□□ -1.04
ZNF558-201ENST00000301475 ZNF474Q6S9Z5 364 aaPredicted RBP8.54□□□□□ -1.04
ZNF558-201ENST00000301475 C22orf34Q6ZV56 151 aa8.54□□□□□ -1.04
ZNF558-201ENST00000301475 ZNF479Q96JC4 524 aa8.54□□□□□ -1.04
ZNF558-201ENST00000301475 PCNX1Q96RV3 2341 aa8.54□□□□□ -1.04
ZNF558-201ENST00000301475 I3L2K1 104 aa8.54□□□□□ -1.04
ZNF558-201ENST00000301475 CCL11P51671 97 aa8.54□□□□□ -1.04
ZNF558-201ENST00000301475 DLX1P56177 255 aa8.54□□□□□ -1.04
ZNF558-201ENST00000301475 ATP5G2Q06055 141 aa8.54□□□□□ -1.04
ZNF558-201ENST00000301475 PIP4P1Q86T03 277 aa8.54□□□□□ -1.04
ZNF558-201ENST00000301475 LINC00311Q8N616 119 aa8.54□□□□□ -1.04
ZNF558-201ENST00000301475 MSRB1Q9NZV6 116 aa8.54□□□□□ -1.04
ZNF558-201ENST00000301475 IGKCP01834 107 aa8.53□□□□□ -1.04
ZNF558-201ENST00000301475 CRYGBP07316 175 aa8.53□□□□□ -1.04
ZNF558-201ENST00000301475 LEPP41159 167 aa8.53□□□□□ -1.04
ZNF558-201ENST00000301475 PRB3Q04118 309 aaPredicted RBP8.53□□□□□ -1.04
ZNF558-201ENST00000301475 TWIST1Q15672 202 aa8.53□□□□□ -1.04
ZNF558-201ENST00000301475 ZC2HC1BQ5TFG8 222 aa8.53□□□□□ -1.04
ZNF558-201ENST00000301475 RNF185Q96GF1 192 aa8.53□□□□□ -1.04
ZNF558-201ENST00000301475 SHISA9B4DS77 424 aa8.53□□□□□ -1.04
ZNF558-201ENST00000301475 EGR2P11161 476 aaPredicted RBP8.53□□□□□ -1.04
ZNF558-201ENST00000301475 ZNF575Q86XF7 245 aa8.53□□□□□ -1.04
ZNF558-201ENST00000301475 PRO0461Q9UI25 63 aa8.53□□□□□ -1.04
ZNF558-201ENST00000301475 SIGLEC9Q9Y336 463 aa8.53□□□□□ -1.04
ZNF558-201ENST00000301475 IGKV2-40A0A087WW87 121 aaPredicted RBP8.52□□□□□ -1.05
ZNF558-201ENST00000301475 NPIPB5A8MRT5 1133 aa8.52□□□□□ -1.05
ZNF558-201ENST00000301475 VSTM5A8MXK1 200 aa8.52□□□□□ -1.05
ZNF558-201ENST00000301475 K7EM74 188 aa8.52□□□□□ -1.05
ZNF558-201ENST00000301475 PRRG2O14669 202 aa8.52□□□□□ -1.05
ZNF558-201ENST00000301475 IGKV2D-40P01614 121 aaPredicted RBP8.52□□□□□ -1.05
ZNF558-201ENST00000301475 MAPKAPK5-AS1Q8N8E1 139 aa8.52□□□□□ -1.05
ZNF558-201ENST00000301475 FOXC2Q99958 501 aa8.52□□□□□ -1.05
ZNF558-201ENST00000301475 ATRXP46100 2492 aa8.52□□□□□ -1.05
ZNF558-201ENST00000301475 J3QR89 54 aa8.52□□□□□ -1.05
ZNF558-201ENST00000301475 PRSS1P07477 247 aa8.52□□□□□ -1.05
ZNF558-201ENST00000301475 EVI2AP22794 236 aa8.52□□□□□ -1.05
ZNF558-201ENST00000301475 MC5RP33032 325 aa8.52□□□□□ -1.05
ZNF558-201ENST00000301475 CKS1BP61024 79 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 573.2 ms