RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 Q8N6K4 173 aa17.19■□□□□ 0.34
TPM4-201ENST00000300933 A0A087X0K7 114 aa17.18■□□□□ 0.34
TPM4-201ENST00000300933 IGHV7-81A0A0B4J1V7 117 aa17.18■□□□□ 0.34
TPM4-201ENST00000300933 EGR2P11161 476 aaPredicted RBP17.18■□□□□ 0.34
TPM4-201ENST00000300933 FCGR2BP31994 310 aaPredicted RBP17.18■□□□□ 0.34
TPM4-201ENST00000300933 SOX21Q9Y651 276 aaPredicted RBP17.18■□□□□ 0.34
TPM4-201ENST00000300933 BRD3OSQ6XYD6 125 aa17.18■□□□□ 0.34
TPM4-201ENST00000300933 ZNF491Q8N8L2 437 aa17.18■□□□□ 0.34
TPM4-201ENST00000300933 Q8N9W7 124 aa17.18■□□□□ 0.34
TPM4-201ENST00000300933 PGLYRP4Q96LB8 373 aa17.18■□□□□ 0.34
TPM4-201ENST00000300933 SNAI2O43623 268 aa17.17■□□□□ 0.34
TPM4-201ENST00000300933 PPBPP02775 128 aa17.17■□□□□ 0.34
TPM4-201ENST00000300933 ECSCRQ19T08 205 aa17.17■□□□□ 0.34
TPM4-201ENST00000300933 MINOS1Q5TGZ0 78 aa17.17■□□□□ 0.34
TPM4-201ENST00000300933 TMEM219Q86XT9 240 aa17.17■□□□□ 0.34
TPM4-201ENST00000300933 STXBP6Q8NFX7 210 aa17.17■□□□□ 0.34
TPM4-201ENST00000300933 TMUB1Q9BVT8 246 aa17.17■□□□□ 0.34
TPM4-201ENST00000300933 MINOS1-NBL1R4GNA1 71 aa17.17■□□□□ 0.34
TPM4-201ENST00000300933 IGHV4-61A0A0C4DH41 118 aa17.17■□□□□ 0.34
TPM4-201ENST00000300933 UBE2E1P51965 193 aa17.17■□□□□ 0.34
TPM4-201ENST00000300933 PLP1P60201 277 aa17.17■□□□□ 0.34
TPM4-201ENST00000300933 IGLV11-55A0A075B6I3 123 aa17.16■□□□□ 0.34
TPM4-201ENST00000300933 HSBP1L1C9JCN9 74 aa17.16■□□□□ 0.34
TPM4-201ENST00000300933 HBBP68871 147 aa17.16■□□□□ 0.34
TPM4-201ENST00000300933 LINC00322Q6ZN03 302 aaPredicted RBP17.16■□□□□ 0.34
TPM4-201ENST00000300933 DEFB125Q8N687 156 aa17.16■□□□□ 0.34
TPM4-201ENST00000300933 F8W735 103 aaPredicted RBP17.16■□□□□ 0.34
TPM4-201ENST00000300933 RNF125Q96EQ8 232 aa17.16■□□□□ 0.34
TPM4-201ENST00000300933 A0A1B0GXF2 115 aa17.15■□□□□ 0.34
TPM4-201ENST00000300933 FAM106CPP0CH98 169 aa17.15■□□□□ 0.34
TPM4-201ENST00000300933 PSG9Q00887 426 aa17.15■□□□□ 0.34
TPM4-201ENST00000300933 CCL19Q99731 98 aa17.15■□□□□ 0.34
TPM4-201ENST00000300933 SRSF8Q9BRL6 282 aaKnown RBP17.15■□□□□ 0.34
TPM4-201ENST00000300933 FBN2P35556 2912 aa17.15■□□□□ 0.34
TPM4-201ENST00000300933 CENPVL3A0A0U1RRI6 287 aa17.14■□□□□ 0.34
TPM4-201ENST00000300933 G3V318 75 aa17.14■□□□□ 0.34
TPM4-201ENST00000300933 CRXO43186 299 aaPredicted RBP17.14■□□□□ 0.34
TPM4-201ENST00000300933 LINC00527Q9UJ94 153 aa17.14■□□□□ 0.34
TPM4-201ENST00000300933 FOXE3Q13461 319 aa17.14■□□□□ 0.33
TPM4-201ENST00000300933 SMIM15Q7Z3B0 74 aa17.14■□□□□ 0.33
TPM4-201ENST00000300933 C7orf69Q9H7B7 122 aa17.14■□□□□ 0.33
TPM4-201ENST00000300933 ABCA12Q86UK0 2595 aa17.14■□□□□ 0.33
TPM4-201ENST00000300933 CSN3P07498 182 aa17.14■□□□□ 0.33
TPM4-201ENST00000300933 GOLT1AQ6ZVE7 132 aa17.14■□□□□ 0.33
TPM4-201ENST00000300933 GTSF1Q8WW33 167 aa17.14■□□□□ 0.33
TPM4-201ENST00000300933 TMEM191AQ9H0A3 160 aa17.14■□□□□ 0.33
TPM4-201ENST00000300933 TRAV8-6A0A0B4J262 113 aa17.13■□□□□ 0.33
TPM4-201ENST00000300933 TCRAP04437 139 aa17.13■□□□□ 0.33
TPM4-201ENST00000300933 EBI3Q14213 229 aa17.13■□□□□ 0.33
TPM4-201ENST00000300933 C12orf54Q6X4T0 127 aa17.13■□□□□ 0.33
TPM4-201ENST00000300933 C21orf62Q9NYP8 219 aa17.13■□□□□ 0.33
TPM4-201ENST00000300933 GAGE12BA1L429 117 aa17.13■□□□□ 0.33
TPM4-201ENST00000300933 NPFFO15130 113 aa17.13■□□□□ 0.33
TPM4-201ENST00000300933 ATP5L2Q7Z4Y8 100 aa17.13■□□□□ 0.33
TPM4-201ENST00000300933 TTC9CQ8N5M4 171 aa17.13■□□□□ 0.33
TPM4-201ENST00000300933 CHRDL1Q9BU40 450 aa17.13■□□□□ 0.33
TPM4-201ENST00000300933 PTPN13Q12923 2485 aa17.12■□□□□ 0.33
TPM4-201ENST00000300933 ATP6V0E1O15342 81 aa17.12■□□□□ 0.33
TPM4-201ENST00000300933 MFAP4P55083 255 aa17.12■□□□□ 0.33
TPM4-201ENST00000300933 SCRT2Q9NQ03 307 aa17.12■□□□□ 0.33
TPM4-201ENST00000300933 NPIPB5A8MRT5 1133 aa17.12■□□□□ 0.33
TPM4-201ENST00000300933 C5orf17Q8NAS9 161 aa17.12■□□□□ 0.33
TPM4-201ENST00000300933 SHANK2-AS3Q9BTD1 123 aa17.12■□□□□ 0.33
TPM4-201ENST00000300933 RPP21Q9H633 154 aaKnown RBP17.12■□□□□ 0.33
TPM4-201ENST00000300933 M0R3E3 92 aa17.11■□□□□ 0.33
TPM4-201ENST00000300933 CIARTQ8N365 385 aaPredicted RBP17.11■□□□□ 0.33
TPM4-201ENST00000300933 OOSP1A8MZH6 123 aa17.11■□□□□ 0.33
TPM4-201ENST00000300933 ATP5J2P56134 94 aa17.11■□□□□ 0.33
TPM4-201ENST00000300933 PRNTQ86SH4 94 aa17.11■□□□□ 0.33
TPM4-201ENST00000300933 MAP1LC3CQ9BXW4 147 aa17.11■□□□□ 0.33
TPM4-201ENST00000300933 IGHV4-30-2A0A087WSY4 118 aa17.1■□□□□ 0.33
TPM4-201ENST00000300933 P01737 135 aa17.1■□□□□ 0.33
TPM4-201ENST00000300933 CHCHD1Q96BP2 118 aaKnown RBP17.1■□□□□ 0.33
TPM4-201ENST00000300933 GPR82Q96P67 336 aa17.1■□□□□ 0.33
TPM4-201ENST00000300933 ANKRD17O75179 2603 aaKnown RBP17.09■□□□□ 0.33
TPM4-201ENST00000300933 TRAV40A0A0B4J280 105 aa17.09■□□□□ 0.33
TPM4-201ENST00000300933 H3BRN7 92 aa17.09■□□□□ 0.33
TPM4-201ENST00000300933 IGFL4Q6B9Z1 124 aa17.09■□□□□ 0.33
TPM4-201ENST00000300933 BPIFA4PQ86YQ2 179 aa17.09■□□□□ 0.33
TPM4-201ENST00000300933 CHEK1O14757 476 aa17.09■□□□□ 0.33
TPM4-201ENST00000300933 FAM162BQ5T6X4 162 aa17.08■□□□□ 0.33
TPM4-201ENST00000300933 KLF12Q9Y4X4 402 aa17.08■□□□□ 0.33
TPM4-201ENST00000300933 TRBV19A0A075B6N1 114 aa17.08■□□□□ 0.32
TPM4-201ENST00000300933 A8MWL6 223 aa17.08■□□□□ 0.32
TPM4-201ENST00000300933 CTSGP08311 255 aa17.08■□□□□ 0.32
TPM4-201ENST00000300933 GPR183P32249 361 aa17.08■□□□□ 0.32
TPM4-201ENST00000300933 TCTAP57738 103 aa17.08■□□□□ 0.32
TPM4-201ENST00000300933 C15orf32Q32M92 178 aa17.08■□□□□ 0.32
TPM4-201ENST00000300933 BBC3Q96PG8 261 aaPredicted RBP17.08■□□□□ 0.32
TPM4-201ENST00000300933 WI2-2373I1.2A0A1W2PRP0 233 aa17.07■□□□□ 0.32
TPM4-201ENST00000300933 SAP30O75446 220 aa17.07■□□□□ 0.32
TPM4-201ENST00000300933 CSTL1Q9H114 145 aa17.07■□□□□ 0.32
TPM4-201ENST00000300933 C1RLQ9NZP8 487 aa17.07■□□□□ 0.32
TPM4-201ENST00000300933 IGHV3OR16-13A0A075B7E8 117 aa17.07■□□□□ 0.32
TPM4-201ENST00000300933 IGHV3-74A0A0B4J1X5 117 aa17.07■□□□□ 0.32
TPM4-201ENST00000300933 CD5LO43866 347 aa17.07■□□□□ 0.32
TPM4-201ENST00000300933 HLA-DRB1P01911 266 aa17.07■□□□□ 0.32
TPM4-201ENST00000300933 IGHV4-38-2P0DP08 117 aa17.07■□□□□ 0.32
TPM4-201ENST00000300933 RIPPLY3P57055 190 aa17.06■□□□□ 0.32
TPM4-201ENST00000300933 DAZAP1Q96EP5 407 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms