RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 MCRIP2Q9BUT9 160 aaKnown RBP10.12□□□□□ -0.79
HIF3A-204ENST00000300862 C1RLQ9NZP8 487 aa10.12□□□□□ -0.79
HIF3A-204ENST00000300862 MAP1AP78559 2803 aaPredicted RBP10.11□□□□□ -0.79
HIF3A-204ENST00000300862 TMSB15BA0A087X1C1 80 aa10.11□□□□□ -0.79
HIF3A-204ENST00000300862 MUC21A0A0G2JKD1 596 aa10.11□□□□□ -0.79
HIF3A-204ENST00000300862 MUC21A0A140T8X8 626 aa10.11□□□□□ -0.79
HIF3A-204ENST00000300862 F8W735 103 aaPredicted RBP10.11□□□□□ -0.79
HIF3A-204ENST00000300862 OVOL3O00110 214 aa10.11□□□□□ -0.79
HIF3A-204ENST00000300862 MRPS12O15235 138 aaKnown RBP10.11□□□□□ -0.79
HIF3A-204ENST00000300862 NUDT3O95989 172 aa10.11□□□□□ -0.79
HIF3A-204ENST00000300862 APOHP02749 345 aaPredicted RBP10.11□□□□□ -0.79
HIF3A-204ENST00000300862 MUC21Q5SSG8 566 aa10.11□□□□□ -0.79
HIF3A-204ENST00000300862 C11orf71Q6IPW1 123 aa10.11□□□□□ -0.79
HIF3A-204ENST00000300862 GFRA4Q9GZZ7 299 aa10.11□□□□□ -0.79
HIF3A-204ENST00000300862 MSRB2Q9Y3D2 182 aa10.11□□□□□ -0.79
HIF3A-204ENST00000300862 ZFHX3Q15911 3703 aa10.11□□□□□ -0.79
HIF3A-204ENST00000300862 IGLV11-55A0A075B6I3 123 aa10.11□□□□□ -0.79
HIF3A-204ENST00000300862 LOC102724200A0A096LPH7 203 aaPredicted RBP10.11□□□□□ -0.79
HIF3A-204ENST00000300862 IGFL4Q6B9Z1 124 aa10.11□□□□□ -0.79
HIF3A-204ENST00000300862 WI2-2373I1.2A0A1W2PRP0 233 aa10.1□□□□□ -0.79
HIF3A-204ENST00000300862 MFAP4P55083 255 aa10.1□□□□□ -0.79
HIF3A-204ENST00000300862 KLRB1Q12918 225 aa10.1□□□□□ -0.79
HIF3A-204ENST00000300862 PSG3Q16557 428 aa10.1□□□□□ -0.79
HIF3A-204ENST00000300862 DEFB125Q8N687 156 aa10.1□□□□□ -0.79
HIF3A-204ENST00000300862 H0Y8G0 127 aa10.1□□□□□ -0.79
HIF3A-204ENST00000300862 M0R1W7 72 aa10.1□□□□□ -0.79
HIF3A-204ENST00000300862 ZNF562Q6V9R5 426 aa10.1□□□□□ -0.79
HIF3A-204ENST00000300862 CST9LQ9H4G1 147 aa10.1□□□□□ -0.79
HIF3A-204ENST00000300862 C21orf62Q9NYP8 219 aa10.1□□□□□ -0.79
HIF3A-204ENST00000300862 SLC25A34Q6PIV7 304 aa10.09□□□□□ -0.79
HIF3A-204ENST00000300862 TMEM75Q8N9X5 138 aa10.09□□□□□ -0.79
HIF3A-204ENST00000300862 SOX21Q9Y651 276 aaPredicted RBP10.09□□□□□ -0.79
HIF3A-204ENST00000300862 IGKV2-40A0A087WW87 121 aaPredicted RBP10.09□□□□□ -0.79
HIF3A-204ENST00000300862 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.09□□□□□ -0.79
HIF3A-204ENST00000300862 A0A1B0GUT8 65 aa10.09□□□□□ -0.79
HIF3A-204ENST00000300862 HAX1O00165 279 aa10.09□□□□□ -0.79
HIF3A-204ENST00000300862 LEPROTL1O95214 131 aa10.09□□□□□ -0.79
HIF3A-204ENST00000300862 IGKV2D-40P01614 121 aaPredicted RBP10.09□□□□□ -0.79
HIF3A-204ENST00000300862 CHCHD1Q96BP2 118 aaKnown RBP10.09□□□□□ -0.79
HIF3A-204ENST00000300862 SCRT2Q9NQ03 307 aa10.09□□□□□ -0.79
HIF3A-204ENST00000300862 CBY3A6NI87 242 aa10.08□□□□□ -0.8
HIF3A-204ENST00000300862 K7EQM0 130 aa10.08□□□□□ -0.8
HIF3A-204ENST00000300862 OCIAD2Q56VL3 154 aa10.08□□□□□ -0.8
HIF3A-204ENST00000300862 FAM231BA6NCW3 169 aa10.08□□□□□ -0.8
HIF3A-204ENST00000300862 HLA-DMBP28068 263 aa10.08□□□□□ -0.8
HIF3A-204ENST00000300862 AMMECR1LQ6DCA0 310 aa10.08□□□□□ -0.8
HIF3A-204ENST00000300862 TMUB1Q9BVT8 246 aa10.08□□□□□ -0.8
HIF3A-204ENST00000300862 NPIPB5A8MRT5 1133 aa10.07□□□□□ -0.8
HIF3A-204ENST00000300862 EGR2P11161 476 aaPredicted RBP10.07□□□□□ -0.8
HIF3A-204ENST00000300862 RPS20P60866 119 aaKnown RBP10.07□□□□□ -0.8
HIF3A-204ENST00000300862 FOXE3Q13461 319 aa10.07□□□□□ -0.8
HIF3A-204ENST00000300862 Q8TAT8 98 aa10.07□□□□□ -0.8
HIF3A-204ENST00000300862 NEU4Q8WWR8 484 aaPredicted RBP10.07□□□□□ -0.8
HIF3A-204ENST00000300862 NDFIP1Q9BT67 221 aa10.07□□□□□ -0.8
HIF3A-204ENST00000300862 AAMDCQ9H7C9 122 aa10.07□□□□□ -0.8
HIF3A-204ENST00000300862 FAM162BQ5T6X4 162 aa10.07□□□□□ -0.8
HIF3A-204ENST00000300862 TTC9CQ8N5M4 171 aa10.07□□□□□ -0.8
HIF3A-204ENST00000300862 PMCHL2Q9BQD1 86 aa10.07□□□□□ -0.8
HIF3A-204ENST00000300862 TMEM191AQ9H0A3 160 aa10.07□□□□□ -0.8
HIF3A-204ENST00000300862 VPS13CQ709C8 3753 aa10.06□□□□□ -0.8
HIF3A-204ENST00000300862 A0A087X0K7 114 aa10.06□□□□□ -0.8
HIF3A-204ENST00000300862 IGHV7-81A0A0B4J1V7 117 aa10.06□□□□□ -0.8
HIF3A-204ENST00000300862 CTSGP08311 255 aa10.06□□□□□ -0.8
HIF3A-204ENST00000300862 PSG9Q00887 426 aa10.06□□□□□ -0.8
HIF3A-204ENST00000300862 LYPD1Q8N2G4 141 aa10.06□□□□□ -0.8
HIF3A-204ENST00000300862 VPS25Q9BRG1 176 aa10.06□□□□□ -0.8
HIF3A-204ENST00000300862 CCDC144NLQ6NUI1 221 aa10.06□□□□□ -0.8
HIF3A-204ENST00000300862 C12orf54Q6X4T0 127 aa10.06□□□□□ -0.8
HIF3A-204ENST00000300862 Q8N6K4 173 aa10.06□□□□□ -0.8
HIF3A-204ENST00000300862 TRAV8-6A0A0B4J262 113 aa10.05□□□□□ -0.8
HIF3A-204ENST00000300862 TRBV6-1A0A0K0K1D8 114 aa10.05□□□□□ -0.8
HIF3A-204ENST00000300862 TMEM213A2RRL7 107 aa10.05□□□□□ -0.8
HIF3A-204ENST00000300862 CT45A10P0DMU9 189 aa10.05□□□□□ -0.8
HIF3A-204ENST00000300862 RIGQ13278 110 aa10.05□□□□□ -0.8
HIF3A-204ENST00000300862 LY6DQ14210 128 aa10.05□□□□□ -0.8
HIF3A-204ENST00000300862 ECSCRQ19T08 205 aa10.05□□□□□ -0.8
HIF3A-204ENST00000300862 UBTD1Q9HAC8 227 aa10.05□□□□□ -0.8
HIF3A-204ENST00000300862 IGHV3-66A0A0C4DH42 116 aa10.05□□□□□ -0.8
HIF3A-204ENST00000300862 Q5PR19 223 aa10.05□□□□□ -0.8
HIF3A-204ENST00000300862 Q8N9W7 124 aa10.05□□□□□ -0.8
HIF3A-204ENST00000300862 SMAD5-AS1Q9Y6J3 95 aa10.05□□□□□ -0.8
HIF3A-204ENST00000300862 SH2D1AO60880 128 aa10.04□□□□□ -0.8
HIF3A-204ENST00000300862 FAM106CPP0CH98 169 aa10.04□□□□□ -0.8
HIF3A-204ENST00000300862 GPR183P32249 361 aa10.04□□□□□ -0.8
HIF3A-204ENST00000300862 CSN1S1P47710 185 aa10.04□□□□□ -0.8
HIF3A-204ENST00000300862 FAM106AQ4KMX7 169 aa10.04□□□□□ -0.8
HIF3A-204ENST00000300862 LYZL1Q6UWQ5 148 aa10.04□□□□□ -0.8
HIF3A-204ENST00000300862 PET117Q6UWS5 81 aa10.04□□□□□ -0.8
HIF3A-204ENST00000300862 C2orf91Q6ZV80 131 aa10.04□□□□□ -0.8
HIF3A-204ENST00000300862 VGLL1Q99990 258 aa10.04□□□□□ -0.8
HIF3A-204ENST00000300862 SPG11Q96JI7 2443 aa10.04□□□□□ -0.8
HIF3A-204ENST00000300862 ITPR1Q14643 2758 aa10.04□□□□□ -0.8
HIF3A-204ENST00000300862 IGHV3OR16-13A0A075B7E8 117 aa10.04□□□□□ -0.8
HIF3A-204ENST00000300862 IGHV3-74A0A0B4J1X5 117 aa10.04□□□□□ -0.8
HIF3A-204ENST00000300862 LOC389332A0A1B0GUA5 103 aa10.04□□□□□ -0.8
HIF3A-204ENST00000300862 LINC01548A6NM66 108 aa10.04□□□□□ -0.8
HIF3A-204ENST00000300862 CD5LO43866 347 aa10.04□□□□□ -0.8
HIF3A-204ENST00000300862 HIST1H1AQ02539 215 aaPredicted RBP10.04□□□□□ -0.8
HIF3A-204ENST00000300862 MAP1LC3CQ9BXW4 147 aa10.04□□□□□ -0.8
HIF3A-204ENST00000300862 THYN1Q9P016 225 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms