RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 CMC4P56277 68 aaPredicted RBP10.91□□□□□ -0.66
CHRFAM7A-201ENST00000299847 LINC01619G3V211 115 aa10.91□□□□□ -0.66
CHRFAM7A-201ENST00000299847 MSMBP08118 114 aa10.91□□□□□ -0.66
CHRFAM7A-201ENST00000299847 RNF5Q99942 180 aa10.91□□□□□ -0.66
CHRFAM7A-201ENST00000299847 ZNF503-AS2A6NEH8 195 aa10.9□□□□□ -0.66
CHRFAM7A-201ENST00000299847 PRB1P04280 392 aa10.9□□□□□ -0.66
CHRFAM7A-201ENST00000299847 HAPLN4Q86UW8 402 aa10.9□□□□□ -0.66
CHRFAM7A-201ENST00000299847 PTPRDP23468 1912 aa10.9□□□□□ -0.66
CHRFAM7A-201ENST00000299847 DAD1P61803 113 aa10.9□□□□□ -0.66
CHRFAM7A-201ENST00000299847 EREGO14944 169 aa10.9□□□□□ -0.67
CHRFAM7A-201ENST00000299847 DLEU1O43261 78 aa10.9□□□□□ -0.67
CHRFAM7A-201ENST00000299847 LY6G5BQ8NDX9 201 aa10.9□□□□□ -0.67
CHRFAM7A-201ENST00000299847 OOSP1A8MZH6 123 aa10.89□□□□□ -0.67
CHRFAM7A-201ENST00000299847 RPL32P62910 135 aaKnown RBP10.89□□□□□ -0.67
CHRFAM7A-201ENST00000299847 TRPT1Q86TN4 253 aaKnown RBP10.89□□□□□ -0.67
CHRFAM7A-201ENST00000299847 SLC25A16P16260 332 aa10.89□□□□□ -0.67
CHRFAM7A-201ENST00000299847 MED12Q93074 2177 aa10.89□□□□□ -0.67
CHRFAM7A-201ENST00000299847 CGB3P0DN86 165 aa10.89□□□□□ -0.67
CHRFAM7A-201ENST00000299847 DTX1Q86Y01 620 aa10.89□□□□□ -0.67
CHRFAM7A-201ENST00000299847 POLR3KQ9Y2Y1 108 aaPredicted RBP10.89□□□□□ -0.67
CHRFAM7A-201ENST00000299847 TRBV6-6A0A0A6YYG2 114 aa10.89□□□□□ -0.67
CHRFAM7A-201ENST00000299847 WIPF3A6NGB9 483 aa10.89□□□□□ -0.67
CHRFAM7A-201ENST00000299847 ZNF561-AS1K7EIQ3 104 aa10.89□□□□□ -0.67
CHRFAM7A-201ENST00000299847 MRAPQ8TCY5 172 aa10.89□□□□□ -0.67
CHRFAM7A-201ENST00000299847 LRRK1Q38SD2 2015 aa10.89□□□□□ -0.67
CHRFAM7A-201ENST00000299847 TRAV25A0A0B4J276 109 aa10.88□□□□□ -0.67
CHRFAM7A-201ENST00000299847 Q6ZS92 163 aa10.88□□□□□ -0.67
CHRFAM7A-201ENST00000299847 SPRY2O43597 315 aa10.88□□□□□ -0.67
CHRFAM7A-201ENST00000299847 PHF3Q92576 2039 aaKnown RBP10.88□□□□□ -0.67
CHRFAM7A-201ENST00000299847 FHL1Q13642 323 aa10.88□□□□□ -0.67
CHRFAM7A-201ENST00000299847 ANXA2RQ3ZCQ2 193 aa10.88□□□□□ -0.67
CHRFAM7A-201ENST00000299847 MORN5Q5VZ52 161 aa10.88□□□□□ -0.67
CHRFAM7A-201ENST00000299847 WDR86Q86TI4 376 aa10.88□□□□□ -0.67
CHRFAM7A-201ENST00000299847 TMEM75Q8N9X5 138 aa10.88□□□□□ -0.67
CHRFAM7A-201ENST00000299847 ZNRF2Q8NHG8 242 aa10.88□□□□□ -0.67
CHRFAM7A-201ENST00000299847 KLF12Q9Y4X4 402 aa10.88□□□□□ -0.67
CHRFAM7A-201ENST00000299847 RTTNQ86VV8 2226 aa10.88□□□□□ -0.67
CHRFAM7A-201ENST00000299847 C8orf86Q6ZUL3 223 aa10.88□□□□□ -0.67
CHRFAM7A-201ENST00000299847 C1QTNF4Q9BXJ3 329 aa10.88□□□□□ -0.67
CHRFAM7A-201ENST00000299847 Q6ZR03 302 aa10.87□□□□□ -0.67
CHRFAM7A-201ENST00000299847 ATP6V0BQ99437 205 aa10.87□□□□□ -0.67
CHRFAM7A-201ENST00000299847 IGHG3P01860 377 aa10.87□□□□□ -0.67
CHRFAM7A-201ENST00000299847 SPINK8P0C7L1 97 aa10.87□□□□□ -0.67
CHRFAM7A-201ENST00000299847 LYPD1Q8N2G4 141 aa10.87□□□□□ -0.67
CHRFAM7A-201ENST00000299847 C17orf58Q2M2W7 97 aa10.87□□□□□ -0.67
CHRFAM7A-201ENST00000299847 SNHG12Q9BXW3 62 aa10.87□□□□□ -0.67
CHRFAM7A-201ENST00000299847 IGHV1-69DA0A0B4J2H0 117 aa10.87□□□□□ -0.67
CHRFAM7A-201ENST00000299847 IGHV1-69P01742 117 aa10.87□□□□□ -0.67
CHRFAM7A-201ENST00000299847 RNF114Q9Y508 228 aa10.87□□□□□ -0.67
CHRFAM7A-201ENST00000299847 TRPM7Q96QT4 1865 aa10.86□□□□□ -0.67
CHRFAM7A-201ENST00000299847 FAM231BA6NCW3 169 aa10.86□□□□□ -0.67
CHRFAM7A-201ENST00000299847 MST1LQ2TV78 715 aa10.86□□□□□ -0.67
CHRFAM7A-201ENST00000299847 PFN1P07737 140 aaKnown RBP10.86□□□□□ -0.67
CHRFAM7A-201ENST00000299847 ZNF726P1Q15940 193 aa10.86□□□□□ -0.67
CHRFAM7A-201ENST00000299847 MRPL51Q4U2R6 128 aaKnown RBP10.86□□□□□ -0.67
CHRFAM7A-201ENST00000299847 ZNF524Q96C55 264 aa10.86□□□□□ -0.67
CHRFAM7A-201ENST00000299847 MRPL27Q9P0M9 148 aaKnown RBP10.86□□□□□ -0.67
CHRFAM7A-201ENST00000299847 TRBV25-1A0A075B6N4 114 aa10.85□□□□□ -0.67
CHRFAM7A-201ENST00000299847 TRAV12-1A0A0B4J245 112 aa10.85□□□□□ -0.67
CHRFAM7A-201ENST00000299847 IGKV1-39P01597 117 aa10.85□□□□□ -0.67
CHRFAM7A-201ENST00000299847 IGKV1D-39P04432 117 aa10.85□□□□□ -0.67
CHRFAM7A-201ENST00000299847 MMP23AO75900 390 aa10.85□□□□□ -0.67
CHRFAM7A-201ENST00000299847 TCTEX1D4Q5JR98 221 aa10.85□□□□□ -0.67
CHRFAM7A-201ENST00000299847 THAP8Q8NA92 274 aa10.85□□□□□ -0.67
CHRFAM7A-201ENST00000299847 NDUFA4L2Q9NRX3 87 aa10.85□□□□□ -0.67
CHRFAM7A-201ENST00000299847 TMEM14BQ9NUH8 114 aa10.85□□□□□ -0.67
CHRFAM7A-201ENST00000299847 I3L3M4 83 aa10.85□□□□□ -0.67
CHRFAM7A-201ENST00000299847 UBE2E1P51965 193 aa10.85□□□□□ -0.67
CHRFAM7A-201ENST00000299847 C2orf66Q6UXQ4 117 aa10.85□□□□□ -0.67
CHRFAM7A-201ENST00000299847 LY96Q9Y6Y9 160 aa10.85□□□□□ -0.67
CHRFAM7A-201ENST00000299847 SBF1O95248 1867 aa10.85□□□□□ -0.67
CHRFAM7A-201ENST00000299847 LYL1P12980 280 aa10.85□□□□□ -0.67
CHRFAM7A-201ENST00000299847 HLA-DMBP28068 263 aa10.85□□□□□ -0.67
CHRFAM7A-201ENST00000299847 UBE2V1Q13404 147 aa10.85□□□□□ -0.67
CHRFAM7A-201ENST00000299847 SLAQ13239 276 aa10.84□□□□□ -0.67
CHRFAM7A-201ENST00000299847 IGF2BP2-AS1Q96M15 143 aa10.84□□□□□ -0.67
CHRFAM7A-201ENST00000299847 FANCMQ8IYD8 2048 aa10.84□□□□□ -0.67
CHRFAM7A-201ENST00000299847 RS1O15537 224 aa10.84□□□□□ -0.67
CHRFAM7A-201ENST00000299847 IGLV2-23P01705 113 aa10.84□□□□□ -0.67
CHRFAM7A-201ENST00000299847 HOXD3P31249 432 aaPredicted RBP10.84□□□□□ -0.67
CHRFAM7A-201ENST00000299847 C18orf32Q8TCD1 76 aa10.84□□□□□ -0.67
CHRFAM7A-201ENST00000299847 TICRRQ7Z2Z1 1910 aa10.84□□□□□ -0.67
CHRFAM7A-201ENST00000299847 A0A0J9YY99 117 aa10.84□□□□□ -0.67
CHRFAM7A-201ENST00000299847 K7ERJ3 54 aa10.84□□□□□ -0.67
CHRFAM7A-201ENST00000299847 ZNF833PQ6ZTB9 187 aa10.84□□□□□ -0.67
CHRFAM7A-201ENST00000299847 NKAPP1Q8N9T2 125 aa10.84□□□□□ -0.67
CHRFAM7A-201ENST00000299847 TMEM126AQ9H061 195 aa10.84□□□□□ -0.67
CHRFAM7A-201ENST00000299847 IGHV2-70DA0A0C4DH43 119 aa10.84□□□□□ -0.67
CHRFAM7A-201ENST00000299847 CGB7P0DN87 165 aa10.83□□□□□ -0.68
CHRFAM7A-201ENST00000299847 C17orf77Q96MU5 243 aa10.83□□□□□ -0.68
CHRFAM7A-201ENST00000299847 TRBV19A0A075B6N1 114 aa10.83□□□□□ -0.68
CHRFAM7A-201ENST00000299847 IGHV1-24A0A0C4DH33 117 aa10.83□□□□□ -0.68
CHRFAM7A-201ENST00000299847 LINC01549A6NIU2 74 aa10.83□□□□□ -0.68
CHRFAM7A-201ENST00000299847 FOXL2NBQ6ZUU3 175 aa10.83□□□□□ -0.68
CHRFAM7A-201ENST00000299847 GFRA4Q9GZZ7 299 aa10.83□□□□□ -0.68
CHRFAM7A-201ENST00000299847 PRSS46E5RG02 174 aa10.83□□□□□ -0.68
CHRFAM7A-201ENST00000299847 CEACAM8P31997 349 aaPredicted RBP10.83□□□□□ -0.68
CHRFAM7A-201ENST00000299847 CR1LQ2VPA4 569 aa10.83□□□□□ -0.68
CHRFAM7A-201ENST00000299847 KIAA2026Q5HYC2 2103 aa10.83□□□□□ -0.68
CHRFAM7A-201ENST00000299847 F6UB75 175 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms