RNA–Protein interactions for RNA: ENST00000297354.6

SBSPON-201, Transcript of somatomedin B and thrombospondin type 1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SBSPON, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPON-201ENST00000297354 SPANXN1Q5VSR9 72 aa13.35□□□□□ -0.27
SBSPON-201ENST00000297354 BOD1L2Q8IYS8 172 aa13.35□□□□□ -0.27
SBSPON-201ENST00000297354 C9orf106Q8NAJ2 232 aa13.35□□□□□ -0.27
SBSPON-201ENST00000297354 OTORQ9NRC9 128 aa13.35□□□□□ -0.27
SBSPON-201ENST00000297354 EXPH5Q8NEV8 1989 aa13.35□□□□□ -0.27
SBSPON-201ENST00000297354 TRBV25-1A0A075B6N4 114 aa13.35□□□□□ -0.27
SBSPON-201ENST00000297354 DPM2O94777 84 aa13.35□□□□□ -0.27
SBSPON-201ENST00000297354 IGHV1-18A0A0C4DH31 117 aa13.34□□□□□ -0.27
SBSPON-201ENST00000297354 S100A4P26447 101 aaKnown RBP13.34□□□□□ -0.27
SBSPON-201ENST00000297354 RPL11P62913 178 aaKnown RBP13.34□□□□□ -0.27
SBSPON-201ENST00000297354 SPG11Q96JI7 2443 aa13.34□□□□□ -0.27
SBSPON-201ENST00000297354 SPRY2O43597 315 aa13.34□□□□□ -0.27
SBSPON-201ENST00000297354 MGPP08493 103 aa13.34□□□□□ -0.27
SBSPON-201ENST00000297354 CRXO43186 299 aaPredicted RBP13.34□□□□□ -0.27
SBSPON-201ENST00000297354 CLEC3BP05452 202 aa13.34□□□□□ -0.27
SBSPON-201ENST00000297354 UFSP1Q6NVU6 142 aa13.33□□□□□ -0.27
SBSPON-201ENST00000297354 NGBQ9NPG2 151 aa13.33□□□□□ -0.27
SBSPON-201ENST00000297354 NDUFA4L2Q9NRX3 87 aa13.33□□□□□ -0.27
SBSPON-201ENST00000297354 LRP4O75096 1905 aa13.33□□□□□ -0.28
SBSPON-201ENST00000297354 HAX1O00165 279 aa13.33□□□□□ -0.28
SBSPON-201ENST00000297354 MRPL35Q9NZE8 188 aaKnown RBP13.33□□□□□ -0.28
SBSPON-201ENST00000297354 TRAV26-2A0A0B4J265 109 aa13.33□□□□□ -0.28
SBSPON-201ENST00000297354 C8orf46Q8TAG6 207 aa13.33□□□□□ -0.28
SBSPON-201ENST00000297354 TRBV20-1A0A075B6N2 111 aa13.32□□□□□ -0.28
SBSPON-201ENST00000297354 EFNA4P52798 201 aa13.32□□□□□ -0.28
SBSPON-201ENST00000297354 LGALS9BQ3B8N2 356 aa13.32□□□□□ -0.28
SBSPON-201ENST00000297354 LGALS9CQ6DKI2 356 aa13.32□□□□□ -0.28
SBSPON-201ENST00000297354 SS18L1O75177 396 aaPredicted RBP13.32□□□□□ -0.28
SBSPON-201ENST00000297354 HOXA3O43365 443 aaPredicted RBP13.32□□□□□ -0.28
SBSPON-201ENST00000297354 SH2D1AO60880 128 aa13.32□□□□□ -0.28
SBSPON-201ENST00000297354 SMIM17P0DL12 118 aa13.32□□□□□ -0.28
SBSPON-201ENST00000297354 FAM104BQ5XKR9 115 aa13.32□□□□□ -0.28
SBSPON-201ENST00000297354 NEGR1Q7Z3B1 354 aa13.32□□□□□ -0.28
SBSPON-201ENST00000297354 DDB2Q92466 427 aa13.32□□□□□ -0.28
SBSPON-201ENST00000297354 RITA1Q96K30 269 aa13.32□□□□□ -0.28
SBSPON-201ENST00000297354 TRAV8-2A0A0B4J237 113 aa13.31□□□□□ -0.28
SBSPON-201ENST00000297354 MRAP2Q96G30 205 aa13.31□□□□□ -0.28
SBSPON-201ENST00000297354 RUSC1-AS1Q66K80 236 aa13.31□□□□□ -0.28
SBSPON-201ENST00000297354 SORL1Q92673 2214 aa13.31□□□□□ -0.28
SBSPON-201ENST00000297354 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.31□□□□□ -0.28
SBSPON-201ENST00000297354 NCKAP5O14513 1909 aa13.3□□□□□ -0.28
SBSPON-201ENST00000297354 IGLL5B9A064 214 aa13.3□□□□□ -0.28
SBSPON-201ENST00000297354 TTC32Q5I0X7 151 aa13.3□□□□□ -0.28
SBSPON-201ENST00000297354 C3orf56Q8N813 242 aa13.3□□□□□ -0.28
SBSPON-201ENST00000297354 LINC01549A6NIU2 74 aa13.3□□□□□ -0.28
SBSPON-201ENST00000297354 C12orf74Q32Q52 190 aa13.3□□□□□ -0.28
SBSPON-201ENST00000297354 ONECUT1Q9UBC0 465 aa13.3□□□□□ -0.28
SBSPON-201ENST00000297354 ARRDC1-AS1Q9H2J1 176 aa13.3□□□□□ -0.28
SBSPON-201ENST00000297354 M0R381 172 aa13.29□□□□□ -0.28
SBSPON-201ENST00000297354 RAXQ9Y2V3 346 aa13.29□□□□□ -0.28
SBSPON-201ENST00000297354 CEND1Q8N111 149 aa13.29□□□□□ -0.28
SBSPON-201ENST00000297354 TEX29Q8N6K0 151 aa13.29□□□□□ -0.28
SBSPON-201ENST00000297354 BDP1A6H8Y1 2624 aa13.29□□□□□ -0.28
SBSPON-201ENST00000297354 ARHGAP32A7KAX9 2087 aa13.29□□□□□ -0.28
SBSPON-201ENST00000297354 F8W1H4 67 aa13.28□□□□□ -0.28
SBSPON-201ENST00000297354 FAM27E3Q08E93 113 aa13.28□□□□□ -0.28
SBSPON-201ENST00000297354 PMS2CLQ68D20 193 aa13.28□□□□□ -0.28
SBSPON-201ENST00000297354 ZNF48Q96MX3 618 aaPredicted RBP13.28□□□□□ -0.28
SBSPON-201ENST00000297354 MT-ATP8P03928 68 aa13.28□□□□□ -0.28
SBSPON-201ENST00000297354 GFRA4Q9GZZ7 299 aa13.28□□□□□ -0.28
SBSPON-201ENST00000297354 ZNF492Q9P255 531 aa13.28□□□□□ -0.28
SBSPON-201ENST00000297354 PRR33A8MZF0 331 aa13.28□□□□□ -0.28
SBSPON-201ENST00000297354 FGF6P10767 208 aa13.28□□□□□ -0.28
SBSPON-201ENST00000297354 HLA-DMBP28068 263 aa13.28□□□□□ -0.28
SBSPON-201ENST00000297354 FOXI2Q6ZQN5 318 aa13.28□□□□□ -0.28
SBSPON-201ENST00000297354 ZNF815PA8K554 130 aa13.27□□□□□ -0.28
SBSPON-201ENST00000297354 C9orf172C9J069 976 aa13.27□□□□□ -0.28
SBSPON-201ENST00000297354 CT83Q5H943 113 aa13.27□□□□□ -0.28
SBSPON-201ENST00000297354 F5H697 171 aa13.27□□□□□ -0.29
SBSPON-201ENST00000297354 RNF183Q96D59 192 aa13.27□□□□□ -0.29
SBSPON-201ENST00000297354 BOD1L1Q8NFC6 3051 aa13.27□□□□□ -0.29
SBSPON-201ENST00000297354 ATP5IP56385 69 aaPredicted RBP13.27□□□□□ -0.29
SBSPON-201ENST00000297354 MSMPQ1L6U9 139 aa13.27□□□□□ -0.29
SBSPON-201ENST00000297354 RNF125Q96EQ8 232 aa13.27□□□□□ -0.29
SBSPON-201ENST00000297354 C19orf71A6NCJ1 209 aa13.26□□□□□ -0.29
SBSPON-201ENST00000297354 TNFRSF6BO95407 300 aa13.26□□□□□ -0.29
SBSPON-201ENST00000297354 HLA-DRB4P13762 266 aa13.26□□□□□ -0.29
SBSPON-201ENST00000297354 APOBEC3AP31941 199 aaPredicted RBP13.26□□□□□ -0.29
SBSPON-201ENST00000297354 RAX2Q96IS3 184 aa13.26□□□□□ -0.29
SBSPON-201ENST00000297354 SCGB3A1Q96QR1 104 aa13.26□□□□□ -0.29
SBSPON-201ENST00000297354 SPANXB1Q9NS25 103 aaPredicted RBP13.26□□□□□ -0.29
SBSPON-201ENST00000297354 HLA-DRB4X5D2U9 266 aa13.26□□□□□ -0.29
SBSPON-201ENST00000297354 IGKV1D-37A0A075B6S9 117 aa13.26□□□□□ -0.29
SBSPON-201ENST00000297354 GAS8-AS1O95177 125 aa13.26□□□□□ -0.29
SBSPON-201ENST00000297354 DEFB109BQ30KR1 87 aa13.26□□□□□ -0.29
SBSPON-201ENST00000297354 IGHV3-64A0A075B6Q5 118 aa13.26□□□□□ -0.29
SBSPON-201ENST00000297354 PRSS29PA6NIE9 313 aa13.26□□□□□ -0.29
SBSPON-201ENST00000297354 ERCC8Q13216 396 aa13.26□□□□□ -0.29
SBSPON-201ENST00000297354 DSCAMO60469 2012 aa13.26□□□□□ -0.29
SBSPON-201ENST00000297354 MLST8Q9BVC4 326 aa13.25□□□□□ -0.29
SBSPON-201ENST00000297354 PRSS22Q9GZN4 317 aa13.25□□□□□ -0.29
SBSPON-201ENST00000297354 LYNX1G3V0Z9 82 aa13.25□□□□□ -0.29
SBSPON-201ENST00000297354 LYNX1P0DP58 116 aa13.25□□□□□ -0.29
SBSPON-201ENST00000297354 ABHD17AQ96GS6 310 aa13.25□□□□□ -0.29
SBSPON-201ENST00000297354 GAFA1Q96PS6 74 aa13.25□□□□□ -0.29
SBSPON-201ENST00000297354 CFAP47Q6ZTR5 3102 aa13.25□□□□□ -0.29
SBSPON-201ENST00000297354 NACAE9PAV3 2078 aa13.25□□□□□ -0.29
SBSPON-201ENST00000297354 TMEM200BQ69YZ2 307 aa13.25□□□□□ -0.29
SBSPON-201ENST00000297354 TMEM167AQ8TBQ9 72 aa13.25□□□□□ -0.29
SBSPON-201ENST00000297354 SNCGO76070 127 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms