RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 HOXA3O43365 443 aaPredicted RBP10.41□□□□□ -0.74
CHMP4C-201ENST00000297265 COA6Q5JTJ3 125 aaKnown RBP10.41□□□□□ -0.74
CHMP4C-201ENST00000297265 HIST3H2BBQ8N257 126 aa10.41□□□□□ -0.74
CHMP4C-201ENST00000297265 OR4X2Q8NGF9 303 aa10.41□□□□□ -0.74
CHMP4C-201ENST00000297265 ZC2HC1AQ96GY0 325 aa10.41□□□□□ -0.74
CHMP4C-201ENST00000297265 METTL26Q96S19 204 aa10.41□□□□□ -0.74
CHMP4C-201ENST00000297265 ZFP30Q9Y2G7 519 aa10.41□□□□□ -0.74
CHMP4C-201ENST00000297265 ZNF705FA8MVS1 300 aaPredicted RBP10.4□□□□□ -0.74
CHMP4C-201ENST00000297265 NDUFA4O00483 81 aa10.4□□□□□ -0.74
CHMP4C-201ENST00000297265 NUP35Q8NFH5 326 aa10.4□□□□□ -0.74
CHMP4C-201ENST00000297265 TSKUQ8WUA8 353 aa10.4□□□□□ -0.74
CHMP4C-201ENST00000297265 IZUMO1RA6ND01 250 aa10.4□□□□□ -0.75
CHMP4C-201ENST00000297265 CHEK1O14757 476 aa10.4□□□□□ -0.75
CHMP4C-201ENST00000297265 SMAD7O15105 426 aaKnown RBP10.4□□□□□ -0.75
CHMP4C-201ENST00000297265 S100A7P31151 101 aa10.4□□□□□ -0.75
CHMP4C-201ENST00000297265 GTSF1Q8WW33 167 aa10.4□□□□□ -0.75
CHMP4C-201ENST00000297265 NEU1Q99519 415 aa10.4□□□□□ -0.75
CHMP4C-201ENST00000297265 GNB1LQ9BYB4 327 aa10.4□□□□□ -0.75
CHMP4C-201ENST00000297265 GPR61Q9BZJ8 451 aa10.4□□□□□ -0.75
CHMP4C-201ENST00000297265 ZNF702PQ9H963 129 aa10.4□□□□□ -0.75
CHMP4C-201ENST00000297265 IGKV2-40A0A087WW87 121 aaPredicted RBP10.39□□□□□ -0.75
CHMP4C-201ENST00000297265 TRAV8-2A0A0B4J237 113 aa10.39□□□□□ -0.75
CHMP4C-201ENST00000297265 A0A0G2JLM5 398 aa10.39□□□□□ -0.75
CHMP4C-201ENST00000297265 IGKV2D-40P01614 121 aaPredicted RBP10.39□□□□□ -0.75
CHMP4C-201ENST00000297265 KRTAP1-1Q07627 177 aa10.39□□□□□ -0.75
CHMP4C-201ENST00000297265 TMEM136Q6ZRR5 245 aa10.39□□□□□ -0.75
CHMP4C-201ENST00000297265 GLMPQ8WWB7 406 aa10.39□□□□□ -0.75
CHMP4C-201ENST00000297265 RPP21Q9H633 154 aaKnown RBP10.39□□□□□ -0.75
CHMP4C-201ENST00000297265 MAST4O15021 2626 aa10.39□□□□□ -0.75
CHMP4C-201ENST00000297265 HIGD1CA8MV81 97 aa10.38□□□□□ -0.75
CHMP4C-201ENST00000297265 PRAC2D3DTV9 90 aa10.38□□□□□ -0.75
CHMP4C-201ENST00000297265 CT83Q5H943 113 aa10.38□□□□□ -0.75
CHMP4C-201ENST00000297265 LCN12Q6JVE5 192 aa10.38□□□□□ -0.75
CHMP4C-201ENST00000297265 IL17RELQ6ZVW7 336 aa10.38□□□□□ -0.75
CHMP4C-201ENST00000297265 COX8CQ7Z4L0 72 aa10.38□□□□□ -0.75
CHMP4C-201ENST00000297265 LURAP1LQ8IV03 231 aa10.38□□□□□ -0.75
CHMP4C-201ENST00000297265 C8orf49Q96NF6 230 aa10.38□□□□□ -0.75
CHMP4C-201ENST00000297265 VGLL1Q99990 258 aa10.38□□□□□ -0.75
CHMP4C-201ENST00000297265 MRPL18Q9H0U6 180 aaKnown RBP10.38□□□□□ -0.75
CHMP4C-201ENST00000297265 SERTM2A0A1B0GWG4 89 aa10.38□□□□□ -0.75
CHMP4C-201ENST00000297265 SNURFLB1AK76 121 aa10.38□□□□□ -0.75
CHMP4C-201ENST00000297265 K7EQM0 130 aa10.38□□□□□ -0.75
CHMP4C-201ENST00000297265 PDZD11Q5EBL8 140 aa10.38□□□□□ -0.75
CHMP4C-201ENST00000297265 GDF5OSQ5U4N7 250 aa10.38□□□□□ -0.75
CHMP4C-201ENST00000297265 MRPL54Q6P161 138 aaKnown RBP10.38□□□□□ -0.75
CHMP4C-201ENST00000297265 GPHB5Q86YW7 130 aa10.38□□□□□ -0.75
CHMP4C-201ENST00000297265 RNF182Q8N6D2 247 aa10.38□□□□□ -0.75
CHMP4C-201ENST00000297265 SONP18583 2426 aaKnown RBP10.38□□□□□ -0.75
CHMP4C-201ENST00000297265 XKRY2A2RUG3 117 aa10.37□□□□□ -0.75
CHMP4C-201ENST00000297265 P01737 135 aa10.37□□□□□ -0.75
CHMP4C-201ENST00000297265 CSN1S1P47710 185 aa10.37□□□□□ -0.75
CHMP4C-201ENST00000297265 TCF24Q7RTU0 167 aa10.37□□□□□ -0.75
CHMP4C-201ENST00000297265 NAT8BQ9UHF3 227 aa10.37□□□□□ -0.75
CHMP4C-201ENST00000297265 ANK3Q12955 4377 aaKnown RBP10.37□□□□□ -0.75
CHMP4C-201ENST00000297265 A0A1B0GUS0 222 aa10.36□□□□□ -0.75
CHMP4C-201ENST00000297265 TMEM89A2RUT3 159 aa10.36□□□□□ -0.75
CHMP4C-201ENST00000297265 S100A8P05109 93 aa10.36□□□□□ -0.75
CHMP4C-201ENST00000297265 MEOX2P50222 304 aa10.36□□□□□ -0.75
CHMP4C-201ENST00000297265 FAM209BQ5JX69 171 aa10.36□□□□□ -0.75
CHMP4C-201ENST00000297265 C8orf86Q6ZUL3 223 aa10.36□□□□□ -0.75
CHMP4C-201ENST00000297265 ZNF575Q86XF7 245 aa10.36□□□□□ -0.75
CHMP4C-201ENST00000297265 SIGLECL1Q8N7X8 197 aa10.36□□□□□ -0.75
CHMP4C-201ENST00000297265 MYOZ3Q8TDC0 251 aa10.36□□□□□ -0.75
CHMP4C-201ENST00000297265 WIPF2Q8TF74 440 aaPredicted RBP10.36□□□□□ -0.75
CHMP4C-201ENST00000297265 PRR25Q96S07 402 aa10.36□□□□□ -0.75
CHMP4C-201ENST00000297265 PEF1Q9UBV8 284 aaKnown RBP10.36□□□□□ -0.75
CHMP4C-201ENST00000297265 TP53TG3Q9ULZ0 132 aa10.36□□□□□ -0.75
CHMP4C-201ENST00000297265 ACANP16112 2415 aa10.36□□□□□ -0.75
CHMP4C-201ENST00000297265 A0A1B0GXF2 115 aa10.36□□□□□ -0.75
CHMP4C-201ENST00000297265 RPLP1P05386 114 aaKnown RBP10.36□□□□□ -0.75
CHMP4C-201ENST00000297265 FOXA3P55318 350 aaPredicted RBP10.36□□□□□ -0.75
CHMP4C-201ENST00000297265 GBGT1Q8N5D6 347 aa10.36□□□□□ -0.75
CHMP4C-201ENST00000297265 DUX5Q96PT3 197 aa10.36□□□□□ -0.75
CHMP4C-201ENST00000297265 C12orf57Q99622 126 aa10.36□□□□□ -0.75
CHMP4C-201ENST00000297265 SLC50A1Q9BRV3 221 aa10.36□□□□□ -0.75
CHMP4C-201ENST00000297265 NPFFR1Q9GZQ6 430 aa10.36□□□□□ -0.75
CHMP4C-201ENST00000297265 FLNBO75369 2602 aaKnown RBP10.35□□□□□ -0.75
CHMP4C-201ENST00000297265 A8MWL6 223 aa10.35□□□□□ -0.75
CHMP4C-201ENST00000297265 NUPR1O60356 82 aa10.35□□□□□ -0.75
CHMP4C-201ENST00000297265 GZMBP10144 247 aa10.35□□□□□ -0.75
CHMP4C-201ENST00000297265 EDN2P20800 178 aa10.35□□□□□ -0.75
CHMP4C-201ENST00000297265 RPL19P84098 196 aaKnown RBP10.35□□□□□ -0.75
CHMP4C-201ENST00000297265 Q8N2B8 174 aa10.35□□□□□ -0.75
CHMP4C-201ENST00000297265 Q8TAT8 98 aa10.35□□□□□ -0.75
CHMP4C-201ENST00000297265 DAZAP1Q96EP5 407 aaKnown RBP10.35□□□□□ -0.75
CHMP4C-201ENST00000297265 HIST1H2BLQ99880 126 aa10.35□□□□□ -0.75
CHMP4C-201ENST00000297265 FOXC2Q99958 501 aa10.35□□□□□ -0.75
CHMP4C-201ENST00000297265 GFRA4Q9GZZ7 299 aa10.35□□□□□ -0.75
CHMP4C-201ENST00000297265 GRIFINA4D1Z8 144 aa10.34□□□□□ -0.75
CHMP4C-201ENST00000297265 FAM231BA6NCW3 169 aa10.34□□□□□ -0.75
CHMP4C-201ENST00000297265 ZNF80P51504 273 aaPredicted RBP10.34□□□□□ -0.75
CHMP4C-201ENST00000297265 LINC00310P59036 64 aa10.34□□□□□ -0.75
CHMP4C-201ENST00000297265 ERCC8Q13216 396 aa10.34□□□□□ -0.75
CHMP4C-201ENST00000297265 TM4SF20Q53R12 229 aa10.34□□□□□ -0.75
CHMP4C-201ENST00000297265 WDR73Q6P4I2 378 aa10.34□□□□□ -0.75
CHMP4C-201ENST00000297265 RASL11AQ6T310 242 aa10.34□□□□□ -0.75
CHMP4C-201ENST00000297265 TMEM256Q8N2U0 113 aa10.34□□□□□ -0.75
CHMP4C-201ENST00000297265 OR4B1Q8NGF8 309 aa10.34□□□□□ -0.75
CHMP4C-201ENST00000297265 NF1P21359 2839 aa10.34□□□□□ -0.75
CHMP4C-201ENST00000297265 SOCS3O14543 225 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms