RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 Q8TAT8 98 aa10.85□□□□□ -0.67
HPS3-201ENST00000296051 TNFRSF14Q92956 283 aa10.85□□□□□ -0.67
HPS3-201ENST00000296051 ZC2HC1AQ96GY0 325 aa10.85□□□□□ -0.67
HPS3-201ENST00000296051 MRPS16Q9Y3D3 137 aaKnown RBP10.85□□□□□ -0.67
HPS3-201ENST00000296051 LY96Q9Y6Y9 160 aa10.85□□□□□ -0.67
HPS3-201ENST00000296051 OTORQ9NRC9 128 aa10.84□□□□□ -0.67
HPS3-201ENST00000296051 FAM90A9PA6NNJ1 464 aa10.84□□□□□ -0.67
HPS3-201ENST00000296051 BCL6BQ8N143 479 aaPredicted RBP10.84□□□□□ -0.67
HPS3-201ENST00000296051 IGHV1-3A0A0C4DH29 117 aa10.84□□□□□ -0.67
HPS3-201ENST00000296051 PAX8Q06710 450 aa10.84□□□□□ -0.67
HPS3-201ENST00000296051 PRSS57Q6UWY2 283 aa10.84□□□□□ -0.67
HPS3-201ENST00000296051 AMN1Q8IY45 258 aa10.84□□□□□ -0.67
HPS3-201ENST00000296051 OR5AN1Q8NGI8 311 aa10.84□□□□□ -0.67
HPS3-201ENST00000296051 EML6Q6ZMW3 1958 aa10.84□□□□□ -0.67
HPS3-201ENST00000296051 IGKV2-40A0A087WW87 121 aaPredicted RBP10.84□□□□□ -0.67
HPS3-201ENST00000296051 IGKV2D-40P01614 121 aaPredicted RBP10.84□□□□□ -0.67
HPS3-201ENST00000296051 IFI27P40305 119 aaPredicted RBP10.84□□□□□ -0.67
HPS3-201ENST00000296051 ODF3L1Q8IXM7 274 aa10.84□□□□□ -0.67
HPS3-201ENST00000296051 RNF125Q96EQ8 232 aa10.84□□□□□ -0.67
HPS3-201ENST00000296051 SAMD5Q5TGI4 173 aa10.83□□□□□ -0.68
HPS3-201ENST00000296051 MINOS1Q5TGZ0 78 aa10.83□□□□□ -0.68
HPS3-201ENST00000296051 LYZL1Q6UWQ5 148 aa10.83□□□□□ -0.68
HPS3-201ENST00000296051 TMEM167AQ8TBQ9 72 aa10.83□□□□□ -0.68
HPS3-201ENST00000296051 MINOS1-NBL1R4GNA1 71 aa10.83□□□□□ -0.68
HPS3-201ENST00000296051 SZT2Q5T011 3432 aa10.83□□□□□ -0.68
HPS3-201ENST00000296051 FAM231BA6NCW3 169 aa10.83□□□□□ -0.68
HPS3-201ENST00000296051 ATP5L2Q7Z4Y8 100 aa10.83□□□□□ -0.68
HPS3-201ENST00000296051 KIR3DS1Q14943 382 aa10.83□□□□□ -0.68
HPS3-201ENST00000296051 TMEM170BQ5T4T1 132 aa10.83□□□□□ -0.68
HPS3-201ENST00000296051 RNF114Q9Y508 228 aa10.83□□□□□ -0.68
HPS3-201ENST00000296051 MMP23AO75900 390 aa10.82□□□□□ -0.68
HPS3-201ENST00000296051 ERVK11-1P61568 191 aa10.82□□□□□ -0.68
HPS3-201ENST00000296051 CRIP3Q6Q6R5 217 aa10.82□□□□□ -0.68
HPS3-201ENST00000296051 TMEM238LA0A1B0GVL6 79 aa10.82□□□□□ -0.68
HPS3-201ENST00000296051 A6NJY4 79 aa10.82□□□□□ -0.68
HPS3-201ENST00000296051 SEC11AP67812 179 aa10.82□□□□□ -0.68
HPS3-201ENST00000296051 FAM110DQ8TAY7 271 aaPredicted RBP10.82□□□□□ -0.68
HPS3-201ENST00000296051 PRTN3P24158 256 aa10.82□□□□□ -0.68
HPS3-201ENST00000296051 CFHR2P36980 270 aa10.82□□□□□ -0.68
HPS3-201ENST00000296051 ZNF106Q9H2Y7 1883 aaKnown RBP10.81□□□□□ -0.68
HPS3-201ENST00000296051 RNASE4P34096 147 aaKnown RBP10.81□□□□□ -0.68
HPS3-201ENST00000296051 RPS20P60866 119 aaKnown RBP10.81□□□□□ -0.68
HPS3-201ENST00000296051 NRGNQ92686 78 aa10.81□□□□□ -0.68
HPS3-201ENST00000296051 GAFA1Q96PS6 74 aa10.81□□□□□ -0.68
HPS3-201ENST00000296051 A0A1B0GV72 72 aa10.81□□□□□ -0.68
HPS3-201ENST00000296051 TMEM155Q4W5P6 130 aa10.81□□□□□ -0.68
HPS3-201ENST00000296051 FAM71F2Q6NXP2 309 aa10.81□□□□□ -0.68
HPS3-201ENST00000296051 EYSQ5T1H1 3165 aa10.81□□□□□ -0.68
HPS3-201ENST00000296051 GAGE1Q13065 139 aa10.81□□□□□ -0.68
HPS3-201ENST00000296051 PSMG4Q5JS54 123 aa10.81□□□□□ -0.68
HPS3-201ENST00000296051 SCGB3A1Q96QR1 104 aa10.81□□□□□ -0.68
HPS3-201ENST00000296051 SLC25A39Q9BZJ4 359 aaPredicted RBP10.81□□□□□ -0.68
HPS3-201ENST00000296051 M0R1W7 72 aa10.81□□□□□ -0.68
HPS3-201ENST00000296051 RNASE1P07998 156 aaKnown RBP10.81□□□□□ -0.68
HPS3-201ENST00000296051 LINC00173Q6ZV60 143 aa10.81□□□□□ -0.68
HPS3-201ENST00000296051 MS4A6AQ9H2W1 248 aa10.81□□□□□ -0.68
HPS3-201ENST00000296051 PRO3102Q9H379 93 aa10.81□□□□□ -0.68
HPS3-201ENST00000296051 TANC2Q9HCD6 1990 aa10.81□□□□□ -0.68
HPS3-201ENST00000296051 ZNF688P0C7X2 276 aa10.8□□□□□ -0.68
HPS3-201ENST00000296051 C5orf64Q2M2E5 130 aa10.8□□□□□ -0.68
HPS3-201ENST00000296051 FN1P02751 2386 aaKnown RBP10.8□□□□□ -0.68
HPS3-201ENST00000296051 MYO15AQ9UKN7 3530 aa10.8□□□□□ -0.68
HPS3-201ENST00000296051 COL4A4P53420 1690 aaPredicted RBP10.8□□□□□ -0.68
HPS3-201ENST00000296051 ZNF479Q96JC4 524 aa10.8□□□□□ -0.68
HPS3-201ENST00000296051 NUP210Q8TEM1 1887 aaPredicted RBP10.8□□□□□ -0.68
HPS3-201ENST00000296051 TMEM213A2RRL7 107 aa10.8□□□□□ -0.68
HPS3-201ENST00000296051 SRRM4A7MD48 611 aaKnown RBP10.8□□□□□ -0.68
HPS3-201ENST00000296051 RPL35AP18077 110 aaKnown RBP10.8□□□□□ -0.68
HPS3-201ENST00000296051 HSD52Q0P140 79 aa10.8□□□□□ -0.68
HPS3-201ENST00000296051 OOSP1A8MZH6 123 aa10.79□□□□□ -0.68
HPS3-201ENST00000296051 CD5LO43866 347 aa10.79□□□□□ -0.68
HPS3-201ENST00000296051 SLC25A48Q6ZT89 311 aaKnown RBP10.79□□□□□ -0.68
HPS3-201ENST00000296051 C11orf1Q9H5F2 150 aa10.79□□□□□ -0.68
HPS3-201ENST00000296051 TMEM14BQ9NUH8 114 aa10.79□□□□□ -0.68
HPS3-201ENST00000296051 MRPL52Q86TS9 123 aaKnown RBP10.79□□□□□ -0.68
HPS3-201ENST00000296051 Q8NFD4 153 aa10.79□□□□□ -0.68
HPS3-201ENST00000296051 IGHV1-24A0A0C4DH33 117 aa10.79□□□□□ -0.68
HPS3-201ENST00000296051 H0YJW9 148 aa10.79□□□□□ -0.68
HPS3-201ENST00000296051 BUB1B-PAK6H3BSN5 160 aa10.79□□□□□ -0.68
HPS3-201ENST00000296051 TNFRSF18Q9Y5U5 241 aa10.79□□□□□ -0.68
HPS3-201ENST00000296051 SSBP2P81877 361 aaPredicted RBP10.79□□□□□ -0.68
HPS3-201ENST00000296051 ZC2HC1BQ5TFG8 222 aa10.79□□□□□ -0.68
HPS3-201ENST00000296051 TRIOO75962 3097 aa10.79□□□□□ -0.68
HPS3-201ENST00000296051 A0A1W2PPI3 338 aa10.78□□□□□ -0.68
HPS3-201ENST00000296051 GATA3P23771 443 aa10.78□□□□□ -0.68
HPS3-201ENST00000296051 SIGMAR1Q99720 223 aa10.78□□□□□ -0.68
HPS3-201ENST00000296051 FABP5P3A8MUU1 101 aa10.78□□□□□ -0.68
HPS3-201ENST00000296051 CD7P09564 240 aa10.78□□□□□ -0.68
HPS3-201ENST00000296051 KIR2DL4Q99706 377 aa10.78□□□□□ -0.68
HPS3-201ENST00000296051 Q6AWC8 147 aa10.78□□□□□ -0.68
HPS3-201ENST00000296051 RASL11AQ6T310 242 aa10.78□□□□□ -0.68
HPS3-201ENST00000296051 TP73-AS1Q9UF72 201 aa10.78□□□□□ -0.68
HPS3-201ENST00000296051 NACAE9PAV3 2078 aa10.78□□□□□ -0.68
HPS3-201ENST00000296051 ASIPP42127 132 aa10.78□□□□□ -0.68
HPS3-201ENST00000296051 MORN5Q5VZ52 161 aa10.78□□□□□ -0.68
HPS3-201ENST00000296051 ZNF295-AS1Q8N0V1 137 aa10.78□□□□□ -0.68
HPS3-201ENST00000296051 SPOCK3Q9BQ16 436 aa10.78□□□□□ -0.68
HPS3-201ENST00000296051 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.77□□□□□ -0.68
HPS3-201ENST00000296051 ATP5LO75964 103 aa10.77□□□□□ -0.68
HPS3-201ENST00000296051 NDPQ00604 133 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms