RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 C20orf85Q9H1P6 137 aa13.67□□□□□ -0.22
CXCL3-201ENST00000296026 DNAJC4Q9NNZ3 241 aa13.67□□□□□ -0.22
CXCL3-201ENST00000296026 LSM5Q9Y4Y9 91 aaKnown RBP13.67□□□□□ -0.22
CXCL3-201ENST00000296026 C16orf90A8MZG2 172 aa13.66□□□□□ -0.22
CXCL3-201ENST00000296026 J3KRW8 73 aa13.66□□□□□ -0.22
CXCL3-201ENST00000296026 BCAP31P51572 246 aa13.66□□□□□ -0.22
CXCL3-201ENST00000296026 CAV2P51636 162 aa13.66□□□□□ -0.22
CXCL3-201ENST00000296026 RAB31Q13636 194 aa13.66□□□□□ -0.22
CXCL3-201ENST00000296026 MIC13Q5XKP0 118 aa13.66□□□□□ -0.22
CXCL3-201ENST00000296026 NRARPQ7Z6K4 114 aa13.66□□□□□ -0.22
CXCL3-201ENST00000296026 GNPNAT1Q96EK6 184 aaPredicted RBP13.66□□□□□ -0.22
CXCL3-201ENST00000296026 TRAV26-1A0A087WT03 109 aa13.65□□□□□ -0.22
CXCL3-201ENST00000296026 TRAV5A0A0B4J249 113 aa13.65□□□□□ -0.22
CXCL3-201ENST00000296026 GAGE12BA1L429 117 aa13.65□□□□□ -0.22
CXCL3-201ENST00000296026 FAM25EA8MYX2 175 aa13.65□□□□□ -0.22
CXCL3-201ENST00000296026 GAGE7O76087 117 aa13.65□□□□□ -0.22
CXCL3-201ENST00000296026 CST7O76096 145 aa13.65□□□□□ -0.22
CXCL3-201ENST00000296026 GAGE12FP0CL80 117 aa13.65□□□□□ -0.22
CXCL3-201ENST00000296026 GAGE12GP0CL81 117 aa13.65□□□□□ -0.22
CXCL3-201ENST00000296026 GAGE12IP0CL82 117 aa13.65□□□□□ -0.22
CXCL3-201ENST00000296026 KRTAP4-5Q9BYR2 181 aa13.65□□□□□ -0.22
CXCL3-201ENST00000296026 Q9H8V8 135 aa13.65□□□□□ -0.22
CXCL3-201ENST00000296026 TRAV12-3A0A0B4J271 114 aa13.64□□□□□ -0.23
CXCL3-201ENST00000296026 A0A0J9YY99 117 aa13.64□□□□□ -0.23
CXCL3-201ENST00000296026 FAM24AA6NFZ4 105 aa13.64□□□□□ -0.23
CXCL3-201ENST00000296026 SNURFLB1AK76 121 aa13.64□□□□□ -0.23
CXCL3-201ENST00000296026 PLA2G10O15496 165 aa13.64□□□□□ -0.23
CXCL3-201ENST00000296026 RLN2P04090 185 aa13.64□□□□□ -0.23
CXCL3-201ENST00000296026 CT45A10P0DMU9 189 aa13.64□□□□□ -0.23
CXCL3-201ENST00000296026 M6PRP20645 277 aa13.64□□□□□ -0.23
CXCL3-201ENST00000296026 GUK1Q16774 197 aa13.64□□□□□ -0.23
CXCL3-201ENST00000296026 RXFP4Q8TDU9 374 aa13.64□□□□□ -0.23
CXCL3-201ENST00000296026 C5orf51A6NDU8 294 aa13.63□□□□□ -0.23
CXCL3-201ENST00000296026 NPIPB6E9PJ23 425 aa13.63□□□□□ -0.23
CXCL3-201ENST00000296026 LYRM1O43325 122 aa13.63□□□□□ -0.23
CXCL3-201ENST00000296026 HOXA5P20719 270 aa13.63□□□□□ -0.23
CXCL3-201ENST00000296026 LEPP41159 167 aa13.63□□□□□ -0.23
CXCL3-201ENST00000296026 OR1L4Q8NGR5 311 aa13.63□□□□□ -0.23
CXCL3-201ENST00000296026 ODF3Q96PU9 254 aa13.63□□□□□ -0.23
CXCL3-201ENST00000296026 PFDN5Q99471 154 aa13.63□□□□□ -0.23
CXCL3-201ENST00000296026 C11orf1Q9H5F2 150 aa13.63□□□□□ -0.23
CXCL3-201ENST00000296026 UQCC1Q9NVA1 299 aa13.63□□□□□ -0.23
CXCL3-201ENST00000296026 WDR83OSQ9Y284 106 aa13.63□□□□□ -0.23
CXCL3-201ENST00000296026 TRAV6A0A075B6T7 132 aa13.62□□□□□ -0.23
CXCL3-201ENST00000296026 TCRBP04435 133 aa13.62□□□□□ -0.23
CXCL3-201ENST00000296026 ZNF431Q8TF32 576 aaPredicted RBP13.62□□□□□ -0.23
CXCL3-201ENST00000296026 ZNF503Q96F45 646 aa13.62□□□□□ -0.23
CXCL3-201ENST00000296026 SEC22CQ9BRL7 303 aa13.62□□□□□ -0.23
CXCL3-201ENST00000296026 ZNF586Q9NXT0 402 aa13.62□□□□□ -0.23
CXCL3-201ENST00000296026 C2orf50Q96LR7 162 aa13.61□□□□□ -0.23
CXCL3-201ENST00000296026 PYGO2Q9BRQ0 406 aa13.61□□□□□ -0.23
CXCL3-201ENST00000296026 SLC39A9Q9NUM3 307 aa13.61□□□□□ -0.23
CXCL3-201ENST00000296026 UBE2L5PA0A1B0GUS4 154 aa13.6□□□□□ -0.23
CXCL3-201ENST00000296026 ZNF253O75346 499 aa13.6□□□□□ -0.23
CXCL3-201ENST00000296026 CDK2AP2O75956 126 aa13.6□□□□□ -0.23
CXCL3-201ENST00000296026 PVALBP20472 110 aaPredicted RBP13.6□□□□□ -0.23
CXCL3-201ENST00000296026 RPL29P47914 159 aaKnown RBP13.6□□□□□ -0.23
CXCL3-201ENST00000296026 BAXQ07812 192 aa13.6□□□□□ -0.23
CXCL3-201ENST00000296026 VWC2Q2TAL6 325 aa13.6□□□□□ -0.23
CXCL3-201ENST00000296026 KRTAP1-5Q9BYS1 174 aa13.6□□□□□ -0.23
CXCL3-201ENST00000296026 NUDT15Q9NV35 164 aa13.6□□□□□ -0.23
CXCL3-201ENST00000296026 RYR1P21817 5038 aa13.59□□□□□ -0.23
CXCL3-201ENST00000296026 H3BNG1 76 aa13.59□□□□□ -0.23
CXCL3-201ENST00000296026 M0R3E3 92 aa13.59□□□□□ -0.23
CXCL3-201ENST00000296026 SULT1A1P50225 295 aa13.59□□□□□ -0.23
CXCL3-201ENST00000296026 S100A10P60903 97 aa13.59□□□□□ -0.23
CXCL3-201ENST00000296026 DAZ2Q13117 558 aaKnown RBP13.59□□□□□ -0.23
CXCL3-201ENST00000296026 ESRGQ1W209 222 aa13.59□□□□□ -0.23
CXCL3-201ENST00000296026 TTC32Q5I0X7 151 aa13.59□□□□□ -0.23
CXCL3-201ENST00000296026 Q6ZTI0 123 aa13.59□□□□□ -0.23
CXCL3-201ENST00000296026 C12orf45Q8N5I9 185 aaPredicted RBP13.59□□□□□ -0.23
CXCL3-201ENST00000296026 TMPRSS5Q9H3S3 457 aa13.59□□□□□ -0.23
CXCL3-201ENST00000296026 LYRM2Q9NU23 88 aaPredicted RBP13.59□□□□□ -0.23
CXCL3-201ENST00000296026 TRBV19A0A075B6N1 114 aa13.58□□□□□ -0.24
CXCL3-201ENST00000296026 IGSF23A1L1A6 192 aa13.58□□□□□ -0.24
CXCL3-201ENST00000296026 SLC25A5P05141 298 aaKnown RBP13.58□□□□□ -0.24
CXCL3-201ENST00000296026 S100A11P31949 105 aa13.58□□□□□ -0.24
CXCL3-201ENST00000296026 ERCC8Q13216 396 aa13.58□□□□□ -0.24
CXCL3-201ENST00000296026 MRPL53Q96EL3 112 aaKnown RBP13.58□□□□□ -0.24
CXCL3-201ENST00000296026 UPK3BQ9BT76 320 aa13.58□□□□□ -0.24
CXCL3-201ENST00000296026 Q9H3A6 140 aa13.58□□□□□ -0.24
CXCL3-201ENST00000296026 C7orf71A4D174 169 aa13.57□□□□□ -0.24
CXCL3-201ENST00000296026 STX12Q86Y82 276 aa13.57□□□□□ -0.24
CXCL3-201ENST00000296026 TMEM252Q8N6L7 170 aa13.57□□□□□ -0.24
CXCL3-201ENST00000296026 TMEM14CQ9P0S9 112 aa13.57□□□□□ -0.24
CXCL3-201ENST00000296026 MRPS16Q9Y3D3 137 aaKnown RBP13.57□□□□□ -0.24
CXCL3-201ENST00000296026 NDUFB4O95168 129 aa13.56□□□□□ -0.24
CXCL3-201ENST00000296026 FGF7P21781 194 aa13.56□□□□□ -0.24
CXCL3-201ENST00000296026 HBG1P69891 147 aa13.56□□□□□ -0.24
CXCL3-201ENST00000296026 HBG2P69892 147 aa13.56□□□□□ -0.24
CXCL3-201ENST00000296026 RAB32Q13637 225 aa13.56□□□□□ -0.24
CXCL3-201ENST00000296026 SPATA12Q7Z6I5 190 aa13.56□□□□□ -0.24
CXCL3-201ENST00000296026 CHAC2Q8WUX2 184 aa13.56□□□□□ -0.24
CXCL3-201ENST00000296026 GSN-AS1Q9NRJ2 163 aa13.56□□□□□ -0.24
CXCL3-201ENST00000296026 TIMM9Q9Y5J7 89 aa13.56□□□□□ -0.24
CXCL3-201ENST00000296026 ABCA13Q86UQ4 5058 aa13.55□□□□□ -0.24
CXCL3-201ENST00000296026 TRGV2A0A075B6R0 118 aa13.55□□□□□ -0.24
CXCL3-201ENST00000296026 KLLNB2CW77 178 aa13.55□□□□□ -0.24
CXCL3-201ENST00000296026 H2AFB2P0C5Z0 115 aa13.55□□□□□ -0.24
CXCL3-201ENST00000296026 PYYP10082 97 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms