RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 MFAP4P55083 255 aa13.1□□□□□ -0.31
CPSF4-201ENST00000292476 LYZP61626 148 aa13.1□□□□□ -0.31
CPSF4-201ENST00000292476 SLC35B1P78383 322 aa13.1□□□□□ -0.31
CPSF4-201ENST00000292476 FAM162BQ5T6X4 162 aa13.1□□□□□ -0.31
CPSF4-201ENST00000292476 C19orf35Q6ZS72 473 aa13.1□□□□□ -0.31
CPSF4-201ENST00000292476 LYPD1Q8N2G4 141 aa13.1□□□□□ -0.31
CPSF4-201ENST00000292476 OR4B1Q8NGF8 309 aa13.1□□□□□ -0.31
CPSF4-201ENST00000292476 FANCD2OSQ96PS1 177 aa13.1□□□□□ -0.31
CPSF4-201ENST00000292476 NEU1Q99519 415 aa13.1□□□□□ -0.31
CPSF4-201ENST00000292476 TXN2Q99757 166 aa13.1□□□□□ -0.31
CPSF4-201ENST00000292476 HIGD1CA8MV81 97 aa13.09□□□□□ -0.31
CPSF4-201ENST00000292476 IGKV1-17P01599 117 aa13.09□□□□□ -0.31
CPSF4-201ENST00000292476 IGHG2P01859 326 aa13.09□□□□□ -0.31
CPSF4-201ENST00000292476 IGF1P05019 195 aa13.09□□□□□ -0.31
CPSF4-201ENST00000292476 RIPPLY3P57055 190 aa13.09□□□□□ -0.31
CPSF4-201ENST00000292476 ECSCRQ19T08 205 aa13.09□□□□□ -0.31
CPSF4-201ENST00000292476 Q6YL49 198 aa13.09□□□□□ -0.31
CPSF4-201ENST00000292476 VN1R17PQ8TDU5 208 aa13.09□□□□□ -0.31
CPSF4-201ENST00000292476 SHANK2-AS3Q9BTD1 123 aa13.09□□□□□ -0.31
CPSF4-201ENST00000292476 NPIPB6E9PJ23 425 aa13.08□□□□□ -0.31
CPSF4-201ENST00000292476 H3BRN7 92 aa13.08□□□□□ -0.31
CPSF4-201ENST00000292476 AMTP48728 403 aa13.08□□□□□ -0.31
CPSF4-201ENST00000292476 SLAQ13239 276 aa13.08□□□□□ -0.31
CPSF4-201ENST00000292476 PRR27Q6MZM9 219 aa13.08□□□□□ -0.31
CPSF4-201ENST00000292476 C18orf32Q8TCD1 76 aa13.08□□□□□ -0.31
CPSF4-201ENST00000292476 NAV3Q8IVL0 2385 aa13.08□□□□□ -0.31
CPSF4-201ENST00000292476 TRAV41A0A0B4J266 112 aa13.08□□□□□ -0.32
CPSF4-201ENST00000292476 P01737 135 aa13.08□□□□□ -0.32
CPSF4-201ENST00000292476 KIAA1644Q3SXP7 199 aa13.08□□□□□ -0.32
CPSF4-201ENST00000292476 Q86TA4 180 aa13.08□□□□□ -0.32
CPSF4-201ENST00000292476 BPIFA4PQ86YQ2 179 aa13.08□□□□□ -0.32
CPSF4-201ENST00000292476 BCL6BQ8N143 479 aaPredicted RBP13.08□□□□□ -0.32
CPSF4-201ENST00000292476 VAMP8Q9BV40 100 aa13.08□□□□□ -0.32
CPSF4-201ENST00000292476 NRN1Q9NPD7 142 aa13.08□□□□□ -0.32
CPSF4-201ENST00000292476 FBXL7Q9UJT9 491 aa13.08□□□□□ -0.32
CPSF4-201ENST00000292476 ZNF580Q9UK33 172 aa13.08□□□□□ -0.32
CPSF4-201ENST00000292476 IGHV3-21A0A0B4J1V1 117 aa13.07□□□□□ -0.32
CPSF4-201ENST00000292476 H3BUA1 57 aa13.07□□□□□ -0.32
CPSF4-201ENST00000292476 GNG7O60262 68 aa13.07□□□□□ -0.32
CPSF4-201ENST00000292476 BRI3O95415 125 aa13.07□□□□□ -0.32
CPSF4-201ENST00000292476 FCGR2BP31994 310 aaPredicted RBP13.07□□□□□ -0.32
CPSF4-201ENST00000292476 HBBP68871 147 aa13.07□□□□□ -0.32
CPSF4-201ENST00000292476 SCGB2A2Q13296 93 aa13.07□□□□□ -0.32
CPSF4-201ENST00000292476 DMRTA1Q5VZB9 504 aa13.07□□□□□ -0.32
CPSF4-201ENST00000292476 IL17RELQ6ZVW7 336 aa13.07□□□□□ -0.32
CPSF4-201ENST00000292476 DAZAP1Q96EP5 407 aaKnown RBP13.07□□□□□ -0.32
CPSF4-201ENST00000292476 RCHY1Q96PM5 261 aa13.07□□□□□ -0.32
CPSF4-201ENST00000292476 C21orf62Q9NYP8 219 aa13.07□□□□□ -0.32
CPSF4-201ENST00000292476 VPREB3Q9UKI3 123 aa13.07□□□□□ -0.32
CPSF4-201ENST00000292476 SVEP1Q4LDE5 3571 aa13.07□□□□□ -0.32
CPSF4-201ENST00000292476 CRLF1O75462 422 aa13.06□□□□□ -0.32
CPSF4-201ENST00000292476 IGHV4-59P01825 116 aa13.06□□□□□ -0.32
CPSF4-201ENST00000292476 C16orf54Q6UWD8 224 aa13.06□□□□□ -0.32
CPSF4-201ENST00000292476 TMEM75Q8N9X5 138 aa13.06□□□□□ -0.32
CPSF4-201ENST00000292476 OR4F17Q8NGA8 305 aa13.06□□□□□ -0.32
CPSF4-201ENST00000292476 ATP6V0BQ99437 205 aa13.06□□□□□ -0.32
CPSF4-201ENST00000292476 MIEN1Q9BRT3 115 aa13.06□□□□□ -0.32
CPSF4-201ENST00000292476 TRBV19A0A075B6N1 114 aa13.05□□□□□ -0.32
CPSF4-201ENST00000292476 WI2-2373I1.2A0A1W2PRP0 233 aa13.05□□□□□ -0.32
CPSF4-201ENST00000292476 M0R143 59 aa13.05□□□□□ -0.32
CPSF4-201ENST00000292476 GDF5OSQ5U4N7 250 aa13.05□□□□□ -0.32
CPSF4-201ENST00000292476 RBPMS2Q6ZRY4 209 aaKnown RBP13.05□□□□□ -0.32
CPSF4-201ENST00000292476 ALKBH7Q9BT30 221 aaPredicted RBP13.05□□□□□ -0.32
CPSF4-201ENST00000292476 A0A1B0GV90 55 aa13.05□□□□□ -0.32
CPSF4-201ENST00000292476 K7EQM0 130 aa13.05□□□□□ -0.32
CPSF4-201ENST00000292476 SNRPCP09234 159 aaKnown RBP13.05□□□□□ -0.32
CPSF4-201ENST00000292476 IGLC2P0DOY2 106 aa13.05□□□□□ -0.32
CPSF4-201ENST00000292476 RAB4AP20338 218 aa13.05□□□□□ -0.32
CPSF4-201ENST00000292476 S100A7P31151 101 aa13.05□□□□□ -0.32
CPSF4-201ENST00000292476 PDE6HQ13956 83 aa13.05□□□□□ -0.32
CPSF4-201ENST00000292476 Q56UQ5 140 aa13.05□□□□□ -0.32
CPSF4-201ENST00000292476 LEMD1Q68G75 181 aa13.05□□□□□ -0.32
CPSF4-201ENST00000292476 Q8N976 141 aa13.05□□□□□ -0.32
CPSF4-201ENST00000292476 RPH3ALQ9UNE2 315 aa13.05□□□□□ -0.32
CPSF4-201ENST00000292476 ZFP30Q9Y2G7 519 aa13.05□□□□□ -0.32
CPSF4-201ENST00000292476 FAM223BA6NKX1 122 aa13.04□□□□□ -0.32
CPSF4-201ENST00000292476 DIRC3C9JPN6 131 aa13.04□□□□□ -0.32
CPSF4-201ENST00000292476 NDUFB8O95169 186 aa13.04□□□□□ -0.32
CPSF4-201ENST00000292476 C19orf54Q5BKX5 351 aa13.04□□□□□ -0.32
CPSF4-201ENST00000292476 NIT1Q86X76 327 aa13.04□□□□□ -0.32
CPSF4-201ENST00000292476 FAM223AQ8IWN6 122 aa13.04□□□□□ -0.32
CPSF4-201ENST00000292476 TMEM86BQ8N661 226 aa13.04□□□□□ -0.32
CPSF4-201ENST00000292476 ARL6IP6Q8N6S5 226 aa13.04□□□□□ -0.32
CPSF4-201ENST00000292476 ZNF491Q8N8L2 437 aa13.04□□□□□ -0.32
CPSF4-201ENST00000292476 RNF125Q96EQ8 232 aa13.04□□□□□ -0.32
CPSF4-201ENST00000292476 TRBV7-1A0A0A6YYK4 115 aa13.03□□□□□ -0.32
CPSF4-201ENST00000292476 SH2D7A6NKC9 451 aaPredicted RBP13.03□□□□□ -0.32
CPSF4-201ENST00000292476 LINC01548A6NM66 108 aa13.03□□□□□ -0.32
CPSF4-201ENST00000292476 G3V318 75 aa13.03□□□□□ -0.32
CPSF4-201ENST00000292476 IGLV2-11P01706 119 aa13.03□□□□□ -0.32
CPSF4-201ENST00000292476 PMCHP20382 165 aa13.03□□□□□ -0.32
CPSF4-201ENST00000292476 KRTDAPP60985 99 aa13.03□□□□□ -0.32
CPSF4-201ENST00000292476 RHOGP84095 191 aa13.03□□□□□ -0.32
CPSF4-201ENST00000292476 EEF1AKMT3Q96AZ1 226 aa13.03□□□□□ -0.32
CPSF4-201ENST00000292476 TMEM160Q9NX00 188 aa13.03□□□□□ -0.32
CPSF4-201ENST00000292476 SERTM2A0A1B0GWG4 89 aa13.02□□□□□ -0.32
CPSF4-201ENST00000292476 CD33P20138 364 aa13.02□□□□□ -0.32
CPSF4-201ENST00000292476 FOXA3P55318 350 aaPredicted RBP13.02□□□□□ -0.32
CPSF4-201ENST00000292476 C15orf32Q32M92 178 aa13.02□□□□□ -0.32
CPSF4-201ENST00000292476 LINC00322Q6ZN03 302 aaPredicted RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms