RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 BLNKQ8WV28 456 aa7□□□□□ -1.29
CCDC58-201ENST00000291458 IGF2BP2-AS1Q96M15 143 aa7□□□□□ -1.29
CCDC58-201ENST00000291458 SLC50A1Q9BRV3 221 aa7□□□□□ -1.29
CCDC58-201ENST00000291458 DNAJC4Q9NNZ3 241 aa7□□□□□ -1.29
CCDC58-201ENST00000291458 ZNF331Q9NQX6 463 aaPredicted RBP7□□□□□ -1.29
CCDC58-201ENST00000291458 DYNC2H1Q8NCM8 4307 aaKnown RBP7□□□□□ -1.29
CCDC58-201ENST00000291458 E5RGE8 158 aa6.99□□□□□ -1.29
CCDC58-201ENST00000291458 H2BFSP57053 126 aa6.99□□□□□ -1.29
CCDC58-201ENST00000291458 PPP1R1CQ8WVI7 109 aa6.99□□□□□ -1.29
CCDC58-201ENST00000291458 PFDN5Q99471 154 aa6.99□□□□□ -1.29
CCDC58-201ENST00000291458 NEU1Q99519 415 aa6.99□□□□□ -1.29
CCDC58-201ENST00000291458 NPCDR1Q9BY65 106 aa6.99□□□□□ -1.29
CCDC58-201ENST00000291458 NMES1Q9C002 83 aa6.99□□□□□ -1.29
CCDC58-201ENST00000291458 SLC25A31Q9H0C2 315 aa6.99□□□□□ -1.29
CCDC58-201ENST00000291458 APLNQ9ULZ1 77 aa6.99□□□□□ -1.29
CCDC58-201ENST00000291458 LYSTQ99698 3801 aa6.99□□□□□ -1.29
CCDC58-201ENST00000291458 ALMS1Q8TCU4 4167 aa6.98□□□□□ -1.29
CCDC58-201ENST00000291458 RYR2Q92736 4967 aa6.98□□□□□ -1.29
CCDC58-201ENST00000291458 TMEM189A5PLL7 270 aa6.98□□□□□ -1.29
CCDC58-201ENST00000291458 A8MTW9 85 aa6.98□□□□□ -1.29
CCDC58-201ENST00000291458 CRXO43186 299 aaPredicted RBP6.98□□□□□ -1.29
CCDC58-201ENST00000291458 AMBPP02760 352 aa6.98□□□□□ -1.29
CCDC58-201ENST00000291458 IGLC2P0DOY2 106 aa6.98□□□□□ -1.29
CCDC58-201ENST00000291458 CXCL2P19875 107 aa6.98□□□□□ -1.29
CCDC58-201ENST00000291458 RPL29P47914 159 aaKnown RBP6.98□□□□□ -1.29
CCDC58-201ENST00000291458 DAD1P61803 113 aa6.98□□□□□ -1.29
CCDC58-201ENST00000291458 ATP6V1FQ16864 119 aa6.98□□□□□ -1.29
CCDC58-201ENST00000291458 LGALS9CQ6DKI2 356 aa6.98□□□□□ -1.29
CCDC58-201ENST00000291458 OR10J6PQ8NGY7 276 aa6.98□□□□□ -1.29
CCDC58-201ENST00000291458 CLUHP3Q96NS8 147 aa6.98□□□□□ -1.29
CCDC58-201ENST00000291458 LINC01587Q99440 93 aa6.98□□□□□ -1.29
CCDC58-201ENST00000291458 NIPSNAP3BQ9BS92 247 aa6.98□□□□□ -1.29
CCDC58-201ENST00000291458 MARVELD1Q9BSK0 173 aa6.98□□□□□ -1.29
CCDC58-201ENST00000291458 BATF3Q9NR55 127 aa6.98□□□□□ -1.29
CCDC58-201ENST00000291458 ZNF586Q9NXT0 402 aa6.98□□□□□ -1.29
CCDC58-201ENST00000291458 MBD2Q9UBB5 411 aa6.98□□□□□ -1.29
CCDC58-201ENST00000291458 DKK2Q9UBU2 259 aa6.98□□□□□ -1.29
CCDC58-201ENST00000291458 RNF24Q9Y225 148 aa6.98□□□□□ -1.29
CCDC58-201ENST00000291458 SMIM9A6NGZ8 99 aa6.97□□□□□ -1.29
CCDC58-201ENST00000291458 M0R3E3 92 aa6.97□□□□□ -1.29
CCDC58-201ENST00000291458 EIF3GO75821 320 aaKnown RBP eCLIP6.97□□□□□ -1.29
CCDC58-201ENST00000291458 DEFB130BP0DP73 79 aa6.97□□□□□ -1.29
CCDC58-201ENST00000291458 DEFB130AP0DP74 79 aa6.97□□□□□ -1.29
CCDC58-201ENST00000291458 MED14OSP0DP75 135 aa6.97□□□□□ -1.29
CCDC58-201ENST00000291458 FCN2Q15485 313 aa6.97□□□□□ -1.29
CCDC58-201ENST00000291458 MIR17HGQ75NE6 70 aa6.97□□□□□ -1.29
CCDC58-201ENST00000291458 EXOC3-AS1Q8N2X6 119 aa6.97□□□□□ -1.29
CCDC58-201ENST00000291458 TIMM9Q9Y5J7 89 aa6.97□□□□□ -1.29
CCDC58-201ENST00000291458 ALG5Q9Y673 324 aa6.97□□□□□ -1.29
CCDC58-201ENST00000291458 MPC2O95563 127 aa6.96□□□□□ -1.3
CCDC58-201ENST00000291458 OR10J4P0C629 311 aa6.96□□□□□ -1.3
CCDC58-201ENST00000291458 PET100P0DJ07 73 aa6.96□□□□□ -1.3
CCDC58-201ENST00000291458 AZU1P20160 251 aa6.96□□□□□ -1.3
CCDC58-201ENST00000291458 CDKN1BP46527 198 aa6.96□□□□□ -1.3
CCDC58-201ENST00000291458 CYCSP99999 105 aaKnown RBP6.96□□□□□ -1.3
CCDC58-201ENST00000291458 ERCC8Q13216 396 aa6.96□□□□□ -1.3
CCDC58-201ENST00000291458 FFAR4Q5NUL3 377 aa6.96□□□□□ -1.3
CCDC58-201ENST00000291458 UBE2DNLQ8IWF7 75 aa6.96□□□□□ -1.3
CCDC58-201ENST00000291458 ATP5SQ99766 215 aa6.96□□□□□ -1.3
CCDC58-201ENST00000291458 NDUFAF3Q9BU61 184 aa6.96□□□□□ -1.3
CCDC58-201ENST00000291458 RNF126Q9BV68 326 aa6.96□□□□□ -1.3
CCDC58-201ENST00000291458 SLC25A2Q9BXI2 301 aa6.96□□□□□ -1.3
CCDC58-201ENST00000291458 WDR61Q9GZS3 305 aaKnown RBP6.96□□□□□ -1.3
CCDC58-201ENST00000291458 HSPB11Q9Y547 144 aa6.96□□□□□ -1.3
CCDC58-201ENST00000291458 TRBV19A0A075B6N1 114 aa6.95□□□□□ -1.3
CCDC58-201ENST00000291458 IGKV2-40A0A087WW87 121 aaPredicted RBP6.95□□□□□ -1.3
CCDC58-201ENST00000291458 TEX48A0A1B0GUV7 120 aa6.95□□□□□ -1.3
CCDC58-201ENST00000291458 OR7C2O60412 319 aa6.95□□□□□ -1.3
CCDC58-201ENST00000291458 MPDU1O75352 247 aa6.95□□□□□ -1.3
CCDC58-201ENST00000291458 IGKV2D-40P01614 121 aaPredicted RBP6.95□□□□□ -1.3
CCDC58-201ENST00000291458 SRSF3P84103 164 aaKnown RBP6.95□□□□□ -1.3
CCDC58-201ENST00000291458 GFI1BQ5VTD9 330 aa6.95□□□□□ -1.3
CCDC58-201ENST00000291458 FAM122CQ6P4D5 195 aa6.95□□□□□ -1.3
CCDC58-201ENST00000291458 SAT2Q96F10 170 aaPredicted RBP6.95□□□□□ -1.3
CCDC58-201ENST00000291458 TRAV12-3A0A0B4J271 114 aa6.94□□□□□ -1.3
CCDC58-201ENST00000291458 C17orf112F2Z3M2 114 aa6.94□□□□□ -1.3
CCDC58-201ENST00000291458 NDUFB4O95168 129 aa6.94□□□□□ -1.3
CCDC58-201ENST00000291458 IFNA5P01569 189 aa6.94□□□□□ -1.3
CCDC58-201ENST00000291458 CT45A10P0DMU9 189 aa6.94□□□□□ -1.3
CCDC58-201ENST00000291458 RPL12P30050 165 aaKnown RBP6.94□□□□□ -1.3
CCDC58-201ENST00000291458 TSPOP30536 169 aa6.94□□□□□ -1.3
CCDC58-201ENST00000291458 ICAM4Q14773 271 aa6.94□□□□□ -1.3
CCDC58-201ENST00000291458 GUK1Q16774 197 aa6.94□□□□□ -1.3
CCDC58-201ENST00000291458 TMEM88Q6PEY1 159 aa6.94□□□□□ -1.3
CCDC58-201ENST00000291458 SCGB1C1Q8TD33 95 aa6.94□□□□□ -1.3
CCDC58-201ENST00000291458 PHYHIPLQ96FC7 376 aa6.94□□□□□ -1.3
CCDC58-201ENST00000291458 PAXXQ9BUH6 204 aa6.94□□□□□ -1.3
CCDC58-201ENST00000291458 AAMDCQ9H7C9 122 aa6.94□□□□□ -1.3
CCDC58-201ENST00000291458 KCNIP2Q9NS61 270 aa6.94□□□□□ -1.3
CCDC58-201ENST00000291458 RPH3ALQ9UNE2 315 aa6.94□□□□□ -1.3
CCDC58-201ENST00000291458 IGLV2-18A0A075B6J9 118 aa6.93□□□□□ -1.3
CCDC58-201ENST00000291458 PLAC8L1A1L4L8 177 aa6.93□□□□□ -1.3
CCDC58-201ENST00000291458 NPIPB6E9PJ23 425 aa6.93□□□□□ -1.3
CCDC58-201ENST00000291458 F5H768 121 aa6.93□□□□□ -1.3
CCDC58-201ENST00000291458 M0R2N4 97 aa6.93□□□□□ -1.3
CCDC58-201ENST00000291458 HIST1H1EP10412 219 aaKnown RBP6.93□□□□□ -1.3
CCDC58-201ENST00000291458 LEPP41159 167 aa6.93□□□□□ -1.3
CCDC58-201ENST00000291458 TCTAP57738 103 aa6.93□□□□□ -1.3
CCDC58-201ENST00000291458 TAS2R60P59551 318 aa6.93□□□□□ -1.3
CCDC58-201ENST00000291458 UBE2L3P68036 154 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms