RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 KRTAP1-1Q07627 177 aa12.8□□□□□ -0.36
HIF3A-203ENST00000291300 BTF3L4Q96K17 158 aa12.8□□□□□ -0.36
HIF3A-203ENST00000291300 ATP6V0BQ99437 205 aa12.8□□□□□ -0.36
HIF3A-203ENST00000291300 PRDM13Q9H4Q3 707 aa12.8□□□□□ -0.36
HIF3A-203ENST00000291300 CHEK1O14757 476 aa12.79□□□□□ -0.36
HIF3A-203ENST00000291300 PSG9Q00887 426 aa12.79□□□□□ -0.36
HIF3A-203ENST00000291300 PRR31Q5SQ13 230 aa12.79□□□□□ -0.36
HIF3A-203ENST00000291300 MRPL54Q6P161 138 aaKnown RBP12.79□□□□□ -0.36
HIF3A-203ENST00000291300 VGLL1Q99990 258 aa12.79□□□□□ -0.36
HIF3A-203ENST00000291300 PRSS22Q9GZN4 317 aa12.79□□□□□ -0.36
HIF3A-203ENST00000291300 A0A1B0GUS0 222 aa12.79□□□□□ -0.36
HIF3A-203ENST00000291300 CRIP1P50238 77 aa12.79□□□□□ -0.36
HIF3A-203ENST00000291300 SMIM12Q96EX1 92 aa12.79□□□□□ -0.36
HIF3A-203ENST00000291300 GRAMD2BQ96HH9 432 aa12.79□□□□□ -0.36
HIF3A-203ENST00000291300 ZNF580Q9UK33 172 aa12.79□□□□□ -0.36
HIF3A-203ENST00000291300 A0A087X0K7 114 aa12.78□□□□□ -0.36
HIF3A-203ENST00000291300 TRAV8-2A0A0B4J237 113 aa12.78□□□□□ -0.36
HIF3A-203ENST00000291300 TRBV6-1A0A0K0K1D8 114 aa12.78□□□□□ -0.36
HIF3A-203ENST00000291300 RPLP1P05386 114 aaKnown RBP12.78□□□□□ -0.36
HIF3A-203ENST00000291300 TCF24Q7RTU0 167 aa12.78□□□□□ -0.36
HIF3A-203ENST00000291300 Q8TAT8 98 aa12.78□□□□□ -0.36
HIF3A-203ENST00000291300 TRAV9-1A0A075B6T8 112 aa12.77□□□□□ -0.36
HIF3A-203ENST00000291300 NDUFA4O00483 81 aa12.77□□□□□ -0.36
HIF3A-203ENST00000291300 NUP35Q8NFH5 326 aa12.77□□□□□ -0.36
HIF3A-203ENST00000291300 GTSF1Q8WW33 167 aa12.77□□□□□ -0.36
HIF3A-203ENST00000291300 NEU1Q99519 415 aa12.77□□□□□ -0.36
HIF3A-203ENST00000291300 GPR61Q9BZJ8 451 aa12.77□□□□□ -0.36
HIF3A-203ENST00000291300 GZMBP10144 247 aa12.77□□□□□ -0.37
HIF3A-203ENST00000291300 RPL19P84098 196 aaKnown RBP12.77□□□□□ -0.37
HIF3A-203ENST00000291300 TM4SF20Q53R12 229 aa12.77□□□□□ -0.37
HIF3A-203ENST00000291300 LCN12Q6JVE5 192 aa12.77□□□□□ -0.37
HIF3A-203ENST00000291300 C16orf54Q6UWD8 224 aa12.77□□□□□ -0.37
HIF3A-203ENST00000291300 GLMPQ8WWB7 406 aa12.77□□□□□ -0.37
HIF3A-203ENST00000291300 RPP21Q9H633 154 aaKnown RBP12.77□□□□□ -0.37
HIF3A-203ENST00000291300 ZNF492Q9P255 531 aa12.77□□□□□ -0.37
HIF3A-203ENST00000291300 ZNF253O75346 499 aa12.76□□□□□ -0.37
HIF3A-203ENST00000291300 ERCC8Q13216 396 aa12.76□□□□□ -0.37
HIF3A-203ENST00000291300 C1orf194Q5T5A4 169 aa12.76□□□□□ -0.37
HIF3A-203ENST00000291300 LINC00518Q8N0U6 118 aa12.76□□□□□ -0.37
HIF3A-203ENST00000291300 A0A0G2JLM5 398 aa12.76□□□□□ -0.37
HIF3A-203ENST00000291300 IZUMO1RA6ND01 250 aa12.76□□□□□ -0.37
HIF3A-203ENST00000291300 HIGD1CA8MV81 97 aa12.76□□□□□ -0.37
HIF3A-203ENST00000291300 SNURFLB1AK76 121 aa12.76□□□□□ -0.37
HIF3A-203ENST00000291300 P01737 135 aa12.76□□□□□ -0.37
HIF3A-203ENST00000291300 CSN1S1P47710 185 aa12.76□□□□□ -0.37
HIF3A-203ENST00000291300 GDF5OSQ5U4N7 250 aa12.76□□□□□ -0.37
HIF3A-203ENST00000291300 HIST2H2BDQ6DRA6 164 aa12.76□□□□□ -0.37
HIF3A-203ENST00000291300 C8orf86Q6ZUL3 223 aa12.76□□□□□ -0.37
HIF3A-203ENST00000291300 GPHB5Q86YW7 130 aa12.76□□□□□ -0.37
HIF3A-203ENST00000291300 HIST3H2BBQ8N257 126 aa12.76□□□□□ -0.37
HIF3A-203ENST00000291300 TSKUQ8WUA8 353 aa12.76□□□□□ -0.37
HIF3A-203ENST00000291300 MRPL18Q9H0U6 180 aaKnown RBP12.76□□□□□ -0.37
HIF3A-203ENST00000291300 MYO9AB2RTY4 2548 aa12.75□□□□□ -0.37
HIF3A-203ENST00000291300 XKRY2A2RUG3 117 aa12.75□□□□□ -0.37
HIF3A-203ENST00000291300 K7EQM0 130 aa12.75□□□□□ -0.37
HIF3A-203ENST00000291300 CDX1P47902 265 aaPredicted RBP12.75□□□□□ -0.37
HIF3A-203ENST00000291300 TMEM136Q6ZRR5 245 aa12.75□□□□□ -0.37
HIF3A-203ENST00000291300 GBGT1Q8N5D6 347 aa12.75□□□□□ -0.37
HIF3A-203ENST00000291300 TMEM190Q8WZ59 177 aa12.75□□□□□ -0.37
HIF3A-203ENST00000291300 NPFFR1Q9GZQ6 430 aa12.75□□□□□ -0.37
HIF3A-203ENST00000291300 PEF1Q9UBV8 284 aaKnown RBP12.75□□□□□ -0.37
HIF3A-203ENST00000291300 NPIPB6E9PJ23 425 aa12.74□□□□□ -0.37
HIF3A-203ENST00000291300 ZFP30Q9Y2G7 519 aa12.74□□□□□ -0.37
HIF3A-203ENST00000291300 S100A7P31151 101 aa12.74□□□□□ -0.37
HIF3A-203ENST00000291300 NF1P21359 2839 aa12.74□□□□□ -0.37
HIF3A-203ENST00000291300 GRIFINA4D1Z8 144 aa12.73□□□□□ -0.37
HIF3A-203ENST00000291300 KIAA1644Q3SXP7 199 aa12.73□□□□□ -0.37
HIF3A-203ENST00000291300 C20orf173Q96LM9 149 aa12.73□□□□□ -0.37
HIF3A-203ENST00000291300 FOXC2Q99958 501 aa12.73□□□□□ -0.37
HIF3A-203ENST00000291300 ZNF80P51504 273 aaPredicted RBP12.73□□□□□ -0.37
HIF3A-203ENST00000291300 C18orf65Q6ZTR6 163 aa12.73□□□□□ -0.37
HIF3A-203ENST00000291300 DAZAP1Q96EP5 407 aaKnown RBP12.73□□□□□ -0.37
HIF3A-203ENST00000291300 DEFB1P60022 68 aa12.72□□□□□ -0.37
HIF3A-203ENST00000291300 RAB4BP61018 213 aa12.72□□□□□ -0.37
HIF3A-203ENST00000291300 OR2D3Q8NGH3 330 aa12.72□□□□□ -0.37
HIF3A-203ENST00000291300 PGLYRP4Q96LB8 373 aa12.72□□□□□ -0.37
HIF3A-203ENST00000291300 PRR25Q96S07 402 aa12.72□□□□□ -0.37
HIF3A-203ENST00000291300 GNB1LQ9BYB4 327 aa12.72□□□□□ -0.37
HIF3A-203ENST00000291300 NAT8BQ9UHF3 227 aa12.72□□□□□ -0.37
HIF3A-203ENST00000291300 IGKV3-7A0A075B6H7 116 aa12.71□□□□□ -0.37
HIF3A-203ENST00000291300 FAM209BQ5JX69 171 aa12.71□□□□□ -0.37
HIF3A-203ENST00000291300 FAM181BA6NEQ2 426 aa12.71□□□□□ -0.38
HIF3A-203ENST00000291300 F2Z2F3 143 aa12.71□□□□□ -0.38
HIF3A-203ENST00000291300 NUPR1O60356 82 aa12.71□□□□□ -0.38
HIF3A-203ENST00000291300 ZNF705DP0CH99 300 aaPredicted RBP12.71□□□□□ -0.38
HIF3A-203ENST00000291300 ZNF705BP0CI00 300 aaPredicted RBP12.71□□□□□ -0.38
HIF3A-203ENST00000291300 TMEM256Q8N2U0 113 aa12.71□□□□□ -0.38
HIF3A-203ENST00000291300 SLC50A1Q9BRV3 221 aa12.71□□□□□ -0.38
HIF3A-203ENST00000291300 RHPN1-AS1Q9BWJ2 59 aa12.71□□□□□ -0.38
HIF3A-203ENST00000291300 ESM1Q9NQ30 184 aa12.71□□□□□ -0.38
HIF3A-203ENST00000291300 TP53TG3Q9ULZ0 132 aa12.71□□□□□ -0.38
HIF3A-203ENST00000291300 SRD5A1P18405 259 aa12.7□□□□□ -0.38
HIF3A-203ENST00000291300 COA6Q5JTJ3 125 aaKnown RBP12.7□□□□□ -0.38
HIF3A-203ENST00000291300 MYOZ3Q8TDC0 251 aa12.7□□□□□ -0.38
HIF3A-203ENST00000291300 YAE1D1Q9NRH1 226 aa12.7□□□□□ -0.38
HIF3A-203ENST00000291300 MTORP42345 2549 aa12.7□□□□□ -0.38
HIF3A-203ENST00000291300 IGHV7-4-1A0A0J9YVY3 117 aa12.7□□□□□ -0.38
HIF3A-203ENST00000291300 SERTM2A0A1B0GWG4 89 aa12.7□□□□□ -0.38
HIF3A-203ENST00000291300 A8MWL6 223 aa12.7□□□□□ -0.38
HIF3A-203ENST00000291300 SLAQ13239 276 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms