RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 SLAQ13239 276 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 PSMG4Q5JS54 123 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 OR13C6PQ8NH95 151 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 DUX3Q96PT4 197 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 TRBV9A0A0B4J1U6 114 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 TRAV26-2A0A0B4J265 109 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 TRAV12-3A0A0B4J271 114 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 PAX8Q06710 450 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 TMEM95Q3KNT9 176 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 KRTAP27-1Q3LI81 207 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 C1orf229Q6ZS94 237 aaPredicted RBP3.83□□□□□ -1.8
UBR1-201ENST00000290650 TNFRSF14Q92956 283 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 RCHY1Q96PM5 261 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 OSTCQ9NRP0 149 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 CFAP47Q6ZTR5 3102 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 MUC3AQ02505 3323 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 A0A087X0K7 114 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 SH2D1AO60880 128 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 C3orf36Q3SXR2 165 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 ODF3L1Q8IXM7 274 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 TMEM242Q9NWH2 141 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 A0A1B0GWJ7 208 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 RNF223E7ERA6 249 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 CEACAM4O75871 244 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 IFI27P40305 119 aaPredicted RBP3.83□□□□□ -1.8
UBR1-201ENST00000290650 NSUN5P1Q3KNT7 163 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 SIGLEC15Q6ZMC9 328 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 TSKUQ8WUA8 353 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 GNB1LQ9BYB4 327 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 TRAV41A0A0B4J266 112 aa3.82□□□□□ -1.8
UBR1-201ENST00000290650 TYMSP04818 313 aa3.82□□□□□ -1.8
UBR1-201ENST00000290650 CEACAM8P31997 349 aaPredicted RBP3.82□□□□□ -1.8
UBR1-201ENST00000290650 TMEM30BQ3MIR4 351 aa3.82□□□□□ -1.8
UBR1-201ENST00000290650 TMEM155Q4W5P6 130 aa3.82□□□□□ -1.8
UBR1-201ENST00000290650 ZNF833PQ6ZTB9 187 aa3.82□□□□□ -1.8
UBR1-201ENST00000290650 ORMDL3Q8N138 153 aa3.82□□□□□ -1.8
UBR1-201ENST00000290650 SPRY4Q9C004 299 aa3.82□□□□□ -1.8
UBR1-201ENST00000290650 NPFFO15130 113 aa3.82□□□□□ -1.8
UBR1-201ENST00000290650 FAM169BQ8N8A8 192 aa3.82□□□□□ -1.8
UBR1-201ENST00000290650 A0A087WWL8 130 aa3.82□□□□□ -1.8
UBR1-201ENST00000290650 FAM181BA6NEQ2 426 aa3.82□□□□□ -1.8
UBR1-201ENST00000290650 DEFB1P60022 68 aa3.82□□□□□ -1.8
UBR1-201ENST00000290650 OR4X2Q8NGF9 303 aa3.82□□□□□ -1.8
UBR1-201ENST00000290650 DDB2Q92466 427 aa3.82□□□□□ -1.8
UBR1-201ENST00000290650 ANAPC13Q9BS18 74 aa3.82□□□□□ -1.8
UBR1-201ENST00000290650 PIEZO1Q92508 2521 aa3.82□□□□□ -1.8
UBR1-201ENST00000290650 FAM90A9PA6NNJ1 464 aa3.82□□□□□ -1.8
UBR1-201ENST00000290650 NUPR1O60356 82 aa3.82□□□□□ -1.8
UBR1-201ENST00000290650 C3orf79P0CE67 100 aa3.82□□□□□ -1.8
UBR1-201ENST00000290650 SNRPD3P62318 126 aaKnown RBP3.82□□□□□ -1.8
UBR1-201ENST00000290650 RNASE1P07998 156 aaKnown RBP3.82□□□□□ -1.8
UBR1-201ENST00000290650 FABP2P12104 132 aa3.82□□□□□ -1.8
UBR1-201ENST00000290650 TEX36Q5VZQ5 186 aa3.82□□□□□ -1.8
UBR1-201ENST00000290650 PRSS57Q6UWY2 283 aa3.82□□□□□ -1.8
UBR1-201ENST00000290650 ZNF418Q8TF45 676 aaPredicted RBP3.82□□□□□ -1.8
UBR1-201ENST00000290650 POLR3KQ9Y2Y1 108 aaPredicted RBP3.82□□□□□ -1.8
UBR1-201ENST00000290650 FABP5P3A8MUU1 101 aa3.82□□□□□ -1.8
UBR1-201ENST00000290650 APOMO95445 188 aa3.82□□□□□ -1.8
UBR1-201ENST00000290650 EFNA4P52798 201 aa3.82□□□□□ -1.8
UBR1-201ENST00000290650 SCGB3A1Q96QR1 104 aa3.82□□□□□ -1.8
UBR1-201ENST00000290650 YAE1D1Q9NRH1 226 aa3.82□□□□□ -1.8
UBR1-201ENST00000290650 SOX21Q9Y651 276 aaPredicted RBP3.82□□□□□ -1.8
UBR1-201ENST00000290650 IGHV3-53P01767 116 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 ASIPP42127 132 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 TDGF1P3P51864 188 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 Q6ZVH6 145 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 GTSCR1Q86UQ5 136 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 STPG4Q8N801 248 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 TRGV9Q99603 122 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 MRPL36Q9P0J6 103 aaKnown RBP3.81□□□□□ -1.8
UBR1-201ENST00000290650 COL5A1P20908 1838 aaPredicted RBP3.81□□□□□ -1.8
UBR1-201ENST00000290650 TRAV12-2A0A075B6T6 113 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 RRN3P1Q2M238 152 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 TDRG1Q3Y452 100 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 C14orf178Q8N769 122 aaPredicted RBP3.81□□□□□ -1.8
UBR1-201ENST00000290650 SPANXA1Q9NS26 97 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 PRRC2AP48634 2157 aaKnown RBP3.81□□□□□ -1.8
UBR1-201ENST00000290650 LDLRAD2Q5SZI1 272 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 PVRIGQ6DKI7 326 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 NEGR1Q7Z3B1 354 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 LINC01587Q99440 93 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 MSRB2Q9Y3D2 182 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 POLQO75417 2590 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 HTN3P15516 51 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 C1orf194Q5T5A4 169 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 IGFL3Q6UXB1 125 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 OR5AN1Q8NGI8 311 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 VGLL1Q99990 258 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 MIEN1Q9BRT3 115 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 C11orf68Q9H3H3 251 aaKnown RBP3.81□□□□□ -1.8
UBR1-201ENST00000290650 ZFYVE26Q68DK2 2539 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 OVOL3O00110 214 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 LHBP01229 141 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 UBE2E2Q96LR5 201 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 LAMTOR2Q9Y2Q5 125 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 IGKV1OR2-108A0A075B7D4 117 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 F6UB75 175 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 PSG3Q16557 428 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 Q6ZWC4 215 aa3.81□□□□□ -1.8
UBR1-201ENST00000290650 BEND2Q8NDZ0 799 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms