RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 C11orf68Q9H3H3 251 aaKnown RBP6.61□□□□□ -1.35
PTPDC1-201ENST00000288976 NBEAL1Q6ZS30 2694 aa6.61□□□□□ -1.35
PTPDC1-201ENST00000288976 TRBV20OR9-2A0A075B6H5 130 aa6.61□□□□□ -1.35
PTPDC1-201ENST00000288976 M0R2Z0 102 aa6.61□□□□□ -1.35
PTPDC1-201ENST00000288976 MALP21145 153 aa6.61□□□□□ -1.35
PTPDC1-201ENST00000288976 RAB9AP51151 201 aa6.61□□□□□ -1.35
PTPDC1-201ENST00000288976 DEFB131AP59861 70 aa6.61□□□□□ -1.35
PTPDC1-201ENST00000288976 CACNG8Q8WXS5 425 aa6.61□□□□□ -1.35
PTPDC1-201ENST00000288976 TMEM18Q96B42 140 aa6.61□□□□□ -1.35
PTPDC1-201ENST00000288976 SLC35B3Q9H1N7 401 aa6.61□□□□□ -1.35
PTPDC1-201ENST00000288976 FBLL1A6NHQ2 334 aaKnown RBP6.6□□□□□ -1.35
PTPDC1-201ENST00000288976 FAM223BA6NKX1 122 aa6.6□□□□□ -1.35
PTPDC1-201ENST00000288976 E7EUB6 86 aa6.6□□□□□ -1.35
PTPDC1-201ENST00000288976 OR10J3Q5JRS4 329 aa6.6□□□□□ -1.35
PTPDC1-201ENST00000288976 FAM223AQ8IWN6 122 aa6.6□□□□□ -1.35
PTPDC1-201ENST00000288976 ITPR2Q14571 2701 aa6.6□□□□□ -1.35
PTPDC1-201ENST00000288976 G3V318 75 aa6.6□□□□□ -1.35
PTPDC1-201ENST00000288976 FOXA3P55318 350 aaPredicted RBP6.6□□□□□ -1.35
PTPDC1-201ENST00000288976 SMAGPQ0VAQ4 97 aa6.6□□□□□ -1.35
PTPDC1-201ENST00000288976 TMEM183BQ1AE95 376 aa6.6□□□□□ -1.35
PTPDC1-201ENST00000288976 TMEM183AQ8IXX5 376 aa6.6□□□□□ -1.35
PTPDC1-201ENST00000288976 TAF15Q92804 592 aaKnown RBP eCLIP6.6□□□□□ -1.35
PTPDC1-201ENST00000288976 NKX6-2Q9C056 277 aaPredicted RBP6.6□□□□□ -1.35
PTPDC1-201ENST00000288976 NIT2Q9NQR4 276 aa6.6□□□□□ -1.35
PTPDC1-201ENST00000288976 LOC105371267A0A1B0GV96 52 aa6.6□□□□□ -1.35
PTPDC1-201ENST00000288976 RAB19A4D1S5 217 aa6.6□□□□□ -1.35
PTPDC1-201ENST00000288976 CYSRT1A8MQ03 144 aa6.6□□□□□ -1.35
PTPDC1-201ENST00000288976 RNF152Q8N8N0 203 aa6.6□□□□□ -1.35
PTPDC1-201ENST00000288976 TMEM170AQ8WVE7 144 aa6.6□□□□□ -1.35
PTPDC1-201ENST00000288976 ESM1Q9NQ30 184 aa6.6□□□□□ -1.35
PTPDC1-201ENST00000288976 IGLV11-55A0A075B6I3 123 aa6.6□□□□□ -1.35
PTPDC1-201ENST00000288976 IGLV1-40P01703 118 aa6.6□□□□□ -1.35
PTPDC1-201ENST00000288976 ARL14EPLP0DKL9 152 aa6.6□□□□□ -1.35
PTPDC1-201ENST00000288976 CXCL2P19875 107 aa6.6□□□□□ -1.35
PTPDC1-201ENST00000288976 NMUP48645 174 aa6.6□□□□□ -1.35
PTPDC1-201ENST00000288976 SRSF2Q01130 221 aaKnown RBP6.6□□□□□ -1.35
PTPDC1-201ENST00000288976 IGFL4Q6B9Z1 124 aa6.6□□□□□ -1.35
PTPDC1-201ENST00000288976 ZMAT4Q9H898 229 aa6.6□□□□□ -1.35
PTPDC1-201ENST00000288976 TET2Q6N021 2002 aaPredicted RBP6.59□□□□□ -1.35
PTPDC1-201ENST00000288976 TRBV9A0A0B4J1U6 114 aa6.59□□□□□ -1.35
PTPDC1-201ENST00000288976 VN1R17PQ8TDU5 208 aa6.59□□□□□ -1.35
PTPDC1-201ENST00000288976 TMEM101Q96IK0 257 aa6.59□□□□□ -1.35
PTPDC1-201ENST00000288976 CIDEAO60543 219 aa6.59□□□□□ -1.35
PTPDC1-201ENST00000288976 EIF4E3Q8N5X7 224 aaKnown RBP6.59□□□□□ -1.35
PTPDC1-201ENST00000288976 C18orf15Q96N68 181 aa6.59□□□□□ -1.35
PTPDC1-201ENST00000288976 VAX2Q9UIW0 290 aa6.59□□□□□ -1.35
PTPDC1-201ENST00000288976 HINT1P49773 126 aaPredicted RBP6.59□□□□□ -1.36
PTPDC1-201ENST00000288976 FAM3BP58499 235 aaPredicted RBP6.59□□□□□ -1.36
PTPDC1-201ENST00000288976 IBA57Q5T440 356 aaKnown RBP6.59□□□□□ -1.36
PTPDC1-201ENST00000288976 TMEM170BQ5T4T1 132 aa6.59□□□□□ -1.36
PTPDC1-201ENST00000288976 LYRM7Q5U5X0 104 aa6.59□□□□□ -1.36
PTPDC1-201ENST00000288976 ZNF600Q6ZNG1 722 aa6.59□□□□□ -1.36
PTPDC1-201ENST00000288976 MRAP2Q96G30 205 aa6.59□□□□□ -1.36
PTPDC1-201ENST00000288976 FOXE3Q13461 319 aa6.58□□□□□ -1.36
PTPDC1-201ENST00000288976 OR11H1Q8NG94 326 aa6.58□□□□□ -1.36
PTPDC1-201ENST00000288976 GATAD1Q8WUU5 269 aa6.58□□□□□ -1.36
PTPDC1-201ENST00000288976 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.58□□□□□ -1.36
PTPDC1-201ENST00000288976 TRGC1P0CF51 173 aa6.58□□□□□ -1.36
PTPDC1-201ENST00000288976 DEFB136Q30KP8 78 aa6.58□□□□□ -1.36
PTPDC1-201ENST00000288976 REC114Q7Z4M0 266 aa6.58□□□□□ -1.36
PTPDC1-201ENST00000288976 HAPLN4Q86UW8 402 aa6.58□□□□□ -1.36
PTPDC1-201ENST00000288976 RNF125Q96EQ8 232 aa6.58□□□□□ -1.36
PTPDC1-201ENST00000288976 A0A096LPF7 62 aa6.58□□□□□ -1.36
PTPDC1-201ENST00000288976 CFDP00746 253 aaPredicted RBP6.58□□□□□ -1.36
PTPDC1-201ENST00000288976 IGHG4P01861 327 aa6.58□□□□□ -1.36
PTPDC1-201ENST00000288976 ASIPP42127 132 aa6.58□□□□□ -1.36
PTPDC1-201ENST00000288976 C1QL4Q86Z23 238 aa6.58□□□□□ -1.36
PTPDC1-201ENST00000288976 KLHDC1Q8N7A1 406 aa6.58□□□□□ -1.36
PTPDC1-201ENST00000288976 WIPF2Q8TF74 440 aaPredicted RBP6.58□□□□□ -1.36
PTPDC1-201ENST00000288976 USMG5Q96IX5 58 aa6.58□□□□□ -1.36
PTPDC1-201ENST00000288976 NAT8Q9UHE5 227 aa6.58□□□□□ -1.36
PTPDC1-201ENST00000288976 ELOA3CA0A087WX78 387 aaPredicted RBP6.57□□□□□ -1.36
PTPDC1-201ENST00000288976 A0A1B0GUS0 222 aa6.57□□□□□ -1.36
PTPDC1-201ENST00000288976 KNCNA6PVL3 124 aa6.57□□□□□ -1.36
PTPDC1-201ENST00000288976 I3L2K1 104 aa6.57□□□□□ -1.36
PTPDC1-201ENST00000288976 DEFA6Q01524 100 aa6.57□□□□□ -1.36
PTPDC1-201ENST00000288976 RNF212Q495C1 297 aa6.57□□□□□ -1.36
PTPDC1-201ENST00000288976 GCSAMLQ5JQS6 135 aa6.57□□□□□ -1.36
PTPDC1-201ENST00000288976 THAP8Q8NA92 274 aa6.57□□□□□ -1.36
PTPDC1-201ENST00000288976 DMRT1Q9Y5R6 373 aa6.57□□□□□ -1.36
PTPDC1-201ENST00000288976 ELANEP08246 267 aa6.57□□□□□ -1.36
PTPDC1-201ENST00000288976 BLCAPP62952 87 aa6.57□□□□□ -1.36
PTPDC1-201ENST00000288976 PSG9Q00887 426 aa6.57□□□□□ -1.36
PTPDC1-201ENST00000288976 TMEM95Q3KNT9 176 aa6.57□□□□□ -1.36
PTPDC1-201ENST00000288976 CYP2G1PQ6ZSU1 146 aa6.57□□□□□ -1.36
PTPDC1-201ENST00000288976 SEPSECSQ9HD40 501 aaKnown RBP6.57□□□□□ -1.36
PTPDC1-201ENST00000288976 FUT9Q9Y231 359 aa6.57□□□□□ -1.36
PTPDC1-201ENST00000288976 CLLU1Q5K131 121 aa6.57□□□□□ -1.36
PTPDC1-201ENST00000288976 C12orf57Q99622 126 aa6.57□□□□□ -1.36
PTPDC1-201ENST00000288976 MANBALQ9NQG1 85 aa6.57□□□□□ -1.36
PTPDC1-201ENST00000288976 CYTL1Q9NRR1 136 aa6.57□□□□□ -1.36
PTPDC1-201ENST00000288976 TRAV12-3A0A0B4J271 114 aa6.57□□□□□ -1.36
PTPDC1-201ENST00000288976 CFAP161Q6P656 301 aa6.57□□□□□ -1.36
PTPDC1-201ENST00000288976 Q6ZSV7 163 aa6.57□□□□□ -1.36
PTPDC1-201ENST00000288976 SMIM12Q96EX1 92 aa6.57□□□□□ -1.36
PTPDC1-201ENST00000288976 PHYHIPLQ96FC7 376 aa6.57□□□□□ -1.36
PTPDC1-201ENST00000288976 FANCD2OSQ96PS1 177 aa6.57□□□□□ -1.36
PTPDC1-201ENST00000288976 TRBV7-1A0A0A6YYK4 115 aa6.56□□□□□ -1.36
PTPDC1-201ENST00000288976 H3BVH4 76 aa6.56□□□□□ -1.36
PTPDC1-201ENST00000288976 RHPN1-AS1Q9BWJ2 59 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 166 ms