RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 FOXG1P55316 489 aaPredicted RBP3.58□□□□□ -1.84
NCOA1-201ENST00000288599 ZNF79Q15937 498 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 KLF14Q8TD94 323 aaPredicted RBP3.58□□□□□ -1.84
NCOA1-201ENST00000288599 MARVELD1Q9BSK0 173 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 IGHV4OR15-8A0A075B7B6 117 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 A0A087WW49 117 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 C1orf194Q5T5A4 169 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 SPINK6Q6UWN8 80 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 STPG4Q8N801 248 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 SAP25Q8TEE9 199 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 LAMTOR2Q9Y2Q5 125 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 IGHV1-45A0A0A0MS14 117 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 NDUFA1O15239 70 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.58□□□□□ -1.84
NCOA1-201ENST00000288599 ANKRD36A6QL64 1941 aa3.58□□□□□ -1.84
NCOA1-201ENST00000288599 A0A087WWC5 75 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 PTGDSP41222 190 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 COQ2Q96H96 371 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 FMC1Q96HJ9 113 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 OSTCQ9NRP0 149 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 RNASE2P10153 161 aaKnown RBP3.57□□□□□ -1.84
NCOA1-201ENST00000288599 PRSS41Q7RTY9 318 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 C1QL4Q86Z23 238 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 HIST1H2BAQ96A08 127 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 VSIG2Q96IQ7 327 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 LINC00477Q96M19 166 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 DAZ1Q9NQZ3 744 aaKnown RBP3.57□□□□□ -1.84
NCOA1-201ENST00000288599 FAM236AA0A1B0GUQ0 79 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 FAM236BA0A1B0GV22 79 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 SPRY2O43597 315 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 IGKV1-39P01597 117 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 IGKV1D-39P04432 117 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 GNG5P63218 68 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 TCF15Q12870 199 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 ZNF345Q14585 488 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 C1orf100Q5SVJ3 147 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 ZNF660Q6AZW8 331 aaPredicted RBP3.57□□□□□ -1.84
NCOA1-201ENST00000288599 ZNF826PQ6ZT77 177 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 Q6ZT83 130 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 TIMM21Q9BVV7 248 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 ZFC3H1O60293 1989 aaKnown RBP3.57□□□□□ -1.84
NCOA1-201ENST00000288599 A0A087WWL8 130 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 SCO2A0A1W2PP80 73 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 TIAF1O95411 115 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 UMODP07911 640 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 KIAA0040Q15053 153 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 NPIPB13A6NJU9 1138 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 NPIPB5A8MRT5 1133 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 NGFRP08138 427 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 NREPQ16612 68 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 ZNF672Q499Z4 452 aaPredicted RBP3.57□□□□□ -1.84
NCOA1-201ENST00000288599 HIGD2AQ9BW72 106 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 LY96Q9Y6Y9 160 aa3.57□□□□□ -1.84
NCOA1-201ENST00000288599 NDUFC2O95298 119 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 CGAP01215 116 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 CA7P43166 264 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 LYZL1Q6UWQ5 148 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 C9orf139Q6ZV77 190 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 IGHV3-16A0A0C4DH30 117 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 XAF1Q6GPH4 301 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 C8orf49Q96NF6 230 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 A0A087X0K7 114 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 IGKV1-6A0A0C4DH72 117 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 FAM19A1Q7Z5A9 133 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 VWCEQ96DN2 955 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 RNASE7Q9H1E1 156 aaKnown RBP3.56□□□□□ -1.84
NCOA1-201ENST00000288599 MDC1Q14676 2089 aaKnown RBP3.56□□□□□ -1.84
NCOA1-201ENST00000288599 SHISA9B4DS77 424 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 IGHMP01871 453 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 INSL3P51460 131 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 FOXL2P58012 376 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 ZNF474Q6S9Z5 364 aaPredicted RBP3.56□□□□□ -1.84
NCOA1-201ENST00000288599 ZNF525Q8N782 197 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 RHPN1-AS1Q9BWJ2 59 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 TMEM133Q9H2Q1 129 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 V9GYH0 126 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 IGLV2-18A0A075B6J9 118 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 A0A1W2PRS3 328 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 NDUFS6O75380 124 aaKnown RBP3.56□□□□□ -1.84
NCOA1-201ENST00000288599 SERF1AO75920 110 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 HLA-DRB4P13762 266 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 UCN2Q96RP3 112 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 NRTNQ99748 197 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 LINC00312Q9Y6C7 94 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 HLA-DRB4X5D2U9 266 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 TDRD15B5MCY1 1934 aaKnown RBP3.56□□□□□ -1.84
NCOA1-201ENST00000288599 M0R1W7 72 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 IL18BPO95998 194 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 IGHG2P01859 326 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 CRYGBP07316 175 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 NBEAP1P0C6P0 100 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 FOXE3Q13461 319 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 ZNF493Q6ZR52 646 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 BPESC1Q9GZL8 116 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 CSDC2Q9Y534 153 aaKnown RBP3.56□□□□□ -1.84
NCOA1-201ENST00000288599 DNAJC13O75165 2243 aa3.56□□□□□ -1.84
NCOA1-201ENST00000288599 MIA3Q5JRA6 1907 aa3.55□□□□□ -1.84
NCOA1-201ENST00000288599 ALPK3Q96L96 1907 aa3.55□□□□□ -1.84
NCOA1-201ENST00000288599 PIKFYVEQ9Y2I7 2098 aa3.55□□□□□ -1.84
NCOA1-201ENST00000288599 A0A096LNI7 61 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms