RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 PDE6HQ13956 83 aa10.37□□□□□ -0.75
SLC28A1-201ENST00000286749 CFHR4Q92496 578 aa10.37□□□□□ -0.75
SLC28A1-201ENST00000286749 U3KQK5 164 aa10.37□□□□□ -0.75
SLC28A1-201ENST00000286749 TRAV8-6A0A0B4J262 113 aa10.37□□□□□ -0.75
SLC28A1-201ENST00000286749 KLRD1Q13241 179 aa10.37□□□□□ -0.75
SLC28A1-201ENST00000286749 HES1Q14469 280 aa10.37□□□□□ -0.75
SLC28A1-201ENST00000286749 ORMDL3Q8N138 153 aa10.37□□□□□ -0.75
SLC28A1-201ENST00000286749 FANCD2OSQ96PS1 177 aa10.37□□□□□ -0.75
SLC28A1-201ENST00000286749 SMKR1H3BMG3 65 aa10.36□□□□□ -0.75
SLC28A1-201ENST00000286749 IGHV3-23P01764 117 aa10.36□□□□□ -0.75
SLC28A1-201ENST00000286749 FGF6P10767 208 aa10.36□□□□□ -0.75
SLC28A1-201ENST00000286749 MRPL51Q4U2R6 128 aaKnown RBP10.36□□□□□ -0.75
SLC28A1-201ENST00000286749 LINC01560Q8TB33 94 aa10.36□□□□□ -0.75
SLC28A1-201ENST00000286749 DPM3Q9P2X0 92 aa10.36□□□□□ -0.75
SLC28A1-201ENST00000286749 F8W735 103 aaPredicted RBP10.36□□□□□ -0.75
SLC28A1-201ENST00000286749 LY6HO94772 140 aa10.36□□□□□ -0.75
SLC28A1-201ENST00000286749 MFAP4P55083 255 aa10.36□□□□□ -0.75
SLC28A1-201ENST00000286749 CACNG7P62955 275 aa10.36□□□□□ -0.75
SLC28A1-201ENST00000286749 ZNF672Q499Z4 452 aaPredicted RBP10.36□□□□□ -0.75
SLC28A1-201ENST00000286749 TMEM97Q5BJF2 176 aa10.36□□□□□ -0.75
SLC28A1-201ENST00000286749 Q8TAT8 98 aa10.36□□□□□ -0.75
SLC28A1-201ENST00000286749 IGLV11-55A0A075B6I3 123 aa10.35□□□□□ -0.75
SLC28A1-201ENST00000286749 C7orf71A4D174 169 aa10.35□□□□□ -0.75
SLC28A1-201ENST00000286749 NDUFA3O95167 84 aa10.35□□□□□ -0.75
SLC28A1-201ENST00000286749 UQCRFS1P47985 274 aa10.35□□□□□ -0.75
SLC28A1-201ENST00000286749 NPBQ8NG41 125 aa10.35□□□□□ -0.75
SLC28A1-201ENST00000286749 CST9LQ9H4G1 147 aa10.35□□□□□ -0.75
SLC28A1-201ENST00000286749 ABCA4P78363 2273 aa10.35□□□□□ -0.75
SLC28A1-201ENST00000286749 SPTBN2O15020 2390 aa10.35□□□□□ -0.75
SLC28A1-201ENST00000286749 EGR2P11161 476 aaPredicted RBP10.35□□□□□ -0.75
SLC28A1-201ENST00000286749 RPS20P60866 119 aaKnown RBP10.35□□□□□ -0.75
SLC28A1-201ENST00000286749 C5orf64Q2M2E5 130 aa10.35□□□□□ -0.75
SLC28A1-201ENST00000286749 S100A7AQ86SG5 101 aa10.35□□□□□ -0.75
SLC28A1-201ENST00000286749 LY6G5BQ8NDX9 201 aa10.35□□□□□ -0.75
SLC28A1-201ENST00000286749 PEF1Q9UBV8 284 aaKnown RBP10.35□□□□□ -0.75
SLC28A1-201ENST00000286749 IGFL4Q6B9Z1 124 aa10.34□□□□□ -0.75
SLC28A1-201ENST00000286749 PRR25Q96S07 402 aa10.34□□□□□ -0.75
SLC28A1-201ENST00000286749 RABAC1Q9UI14 185 aa10.34□□□□□ -0.75
SLC28A1-201ENST00000286749 NPYP01303 97 aa10.34□□□□□ -0.75
SLC28A1-201ENST00000286749 HBDP02042 147 aa10.34□□□□□ -0.75
SLC28A1-201ENST00000286749 CKS2P33552 79 aa10.34□□□□□ -0.75
SLC28A1-201ENST00000286749 ZNF80P51504 273 aaPredicted RBP10.34□□□□□ -0.75
SLC28A1-201ENST00000286749 NDPQ00604 133 aa10.34□□□□□ -0.75
SLC28A1-201ENST00000286749 TWIST1Q15672 202 aa10.34□□□□□ -0.75
SLC28A1-201ENST00000286749 LGALS9BQ3B8N2 356 aa10.34□□□□□ -0.75
SLC28A1-201ENST00000286749 LGALS9CQ6DKI2 356 aa10.34□□□□□ -0.75
SLC28A1-201ENST00000286749 OR11H6Q8NGC7 330 aa10.34□□□□□ -0.75
SLC28A1-201ENST00000286749 C21orf62Q9NYP8 219 aa10.34□□□□□ -0.75
SLC28A1-201ENST00000286749 SAPCD1Q5SSQ6 148 aa10.33□□□□□ -0.76
SLC28A1-201ENST00000286749 FER1L6-AS1Q8NA97 138 aa10.33□□□□□ -0.76
SLC28A1-201ENST00000286749 ARPC1AQ92747 370 aa10.33□□□□□ -0.76
SLC28A1-201ENST00000286749 DPF1Q92782 380 aa10.33□□□□□ -0.76
SLC28A1-201ENST00000286749 VGLL1Q99990 258 aa10.33□□□□□ -0.76
SLC28A1-201ENST00000286749 ANKHD1Q8IWZ3 2542 aaKnown RBP10.33□□□□□ -0.76
SLC28A1-201ENST00000286749 PIEZO1Q92508 2521 aa10.33□□□□□ -0.76
SLC28A1-201ENST00000286749 NPIPB5A8MRT5 1133 aa10.33□□□□□ -0.76
SLC28A1-201ENST00000286749 HLA-DMBP28068 263 aa10.33□□□□□ -0.76
SLC28A1-201ENST00000286749 GRNP28799 593 aaKnown RBP10.33□□□□□ -0.76
SLC28A1-201ENST00000286749 CEACAM3P40198 252 aa10.33□□□□□ -0.76
SLC28A1-201ENST00000286749 SEC11AP67812 179 aa10.33□□□□□ -0.76
SLC28A1-201ENST00000286749 PAX8Q06710 450 aa10.33□□□□□ -0.76
SLC28A1-201ENST00000286749 OCIAD2Q56VL3 154 aa10.33□□□□□ -0.76
SLC28A1-201ENST00000286749 ZNF48Q96MX3 618 aaPredicted RBP10.33□□□□□ -0.76
SLC28A1-201ENST00000286749 CSMD1Q96PZ7 3565 aa10.33□□□□□ -0.76
SLC28A1-201ENST00000286749 IGHV3OR16-8A0A075B7F1 116 aa10.32□□□□□ -0.76
SLC28A1-201ENST00000286749 RPL7P18124 248 aaKnown RBP10.32□□□□□ -0.76
SLC28A1-201ENST00000286749 WFDC3Q8IUB2 231 aa10.32□□□□□ -0.76
SLC28A1-201ENST00000286749 OR1N2Q8NGR9 330 aa10.32□□□□□ -0.76
SLC28A1-201ENST00000286749 NCBP2LA6PVI3 153 aaKnown RBP10.32□□□□□ -0.76
SLC28A1-201ENST00000286749 COX8CQ7Z4L0 72 aa10.32□□□□□ -0.76
SLC28A1-201ENST00000286749 BOD1L2Q8IYS8 172 aa10.32□□□□□ -0.76
SLC28A1-201ENST00000286749 IFI27L1Q96BM0 104 aa10.32□□□□□ -0.76
SLC28A1-201ENST00000286749 THYN1Q9P016 225 aa10.32□□□□□ -0.76
SLC28A1-201ENST00000286749 TLN1Q9Y490 2541 aaKnown RBP10.32□□□□□ -0.76
SLC28A1-201ENST00000286749 FAM90A27PA6NNH2 459 aa10.31□□□□□ -0.76
SLC28A1-201ENST00000286749 SMAD5-AS1Q9Y6J3 95 aa10.31□□□□□ -0.76
SLC28A1-201ENST00000286749 GAGE12BA1L429 117 aa10.31□□□□□ -0.76
SLC28A1-201ENST00000286749 SMAD7O15105 426 aaKnown RBP10.31□□□□□ -0.76
SLC28A1-201ENST00000286749 ZNF562Q6V9R5 426 aa10.31□□□□□ -0.76
SLC28A1-201ENST00000286749 TTC9CQ8N5M4 171 aa10.31□□□□□ -0.76
SLC28A1-201ENST00000286749 MSRB1Q9NZV6 116 aa10.31□□□□□ -0.76
SLC28A1-201ENST00000286749 IGHV3-35A0A0C4DH35 117 aa10.3□□□□□ -0.76
SLC28A1-201ENST00000286749 ODF3BA8MYP8 253 aa10.3□□□□□ -0.76
SLC28A1-201ENST00000286749 IGHG4P01861 327 aa10.3□□□□□ -0.76
SLC28A1-201ENST00000286749 IGLC6P0CF74 106 aa10.3□□□□□ -0.76
SLC28A1-201ENST00000286749 DYNAPQ8N1N2 210 aa10.3□□□□□ -0.76
SLC28A1-201ENST00000286749 NDUFS7O75251 213 aa10.3□□□□□ -0.76
SLC28A1-201ENST00000286749 PPBPP02775 128 aa10.3□□□□□ -0.76
SLC28A1-201ENST00000286749 BMI1P35226 326 aa10.3□□□□□ -0.76
SLC28A1-201ENST00000286749 ZNF575Q86XF7 245 aa10.3□□□□□ -0.76
SLC28A1-201ENST00000286749 C18orf15Q96N68 181 aa10.3□□□□□ -0.76
SLC28A1-201ENST00000286749 VKORC1Q9BQB6 163 aa10.3□□□□□ -0.76
SLC28A1-201ENST00000286749 VPS25Q9BRG1 176 aa10.3□□□□□ -0.76
SLC28A1-201ENST00000286749 A1L4Q6 167 aa10.29□□□□□ -0.76
SLC28A1-201ENST00000286749 ORM1P02763 201 aa10.29□□□□□ -0.76
SLC28A1-201ENST00000286749 CTSGP08311 255 aa10.29□□□□□ -0.76
SLC28A1-201ENST00000286749 NMUP48645 174 aa10.29□□□□□ -0.76
SLC28A1-201ENST00000286749 PRSS57Q6UWY2 283 aa10.29□□□□□ -0.76
SLC28A1-201ENST00000286749 NAA38Q9BRA0 125 aaKnown RBP10.29□□□□□ -0.76
SLC28A1-201ENST00000286749 DKK2Q9UBU2 259 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms