RNA–Protein interactions for RNA: ENST00000285681.6

USP25-202, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,216 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-202ENST00000285681 SFTA2Q6UW10 78 aa16.22■□□□□ 0.19
USP25-202ENST00000285681 LINC00479Q96M42 142 aa16.22■□□□□ 0.19
USP25-202ENST00000285681 C11orf68Q9H3H3 251 aaKnown RBP16.22■□□□□ 0.19
USP25-202ENST00000285681 A0A1B0GV90 55 aa16.22■□□□□ 0.19
USP25-202ENST00000285681 C1orf194Q5T5A4 169 aa16.22■□□□□ 0.19
USP25-202ENST00000285681 GSN-AS1Q9NRJ2 163 aa16.22■□□□□ 0.19
USP25-202ENST00000285681 H3BUT2 72 aa16.22■□□□□ 0.19
USP25-202ENST00000285681 GRNP28799 593 aaKnown RBP16.22■□□□□ 0.19
USP25-202ENST00000285681 SHISA9B4DS77 424 aa16.22■□□□□ 0.19
USP25-202ENST00000285681 HIST1H2BLQ99880 126 aa16.22■□□□□ 0.19
USP25-202ENST00000285681 MS4A6AQ9H2W1 248 aa16.22■□□□□ 0.19
USP25-202ENST00000285681 NDUFA4O00483 81 aa16.21■□□□□ 0.19
USP25-202ENST00000285681 VOPP1Q96AW1 172 aa16.21■□□□□ 0.19
USP25-202ENST00000285681 LIME1Q9H400 295 aa16.21■□□□□ 0.19
USP25-202ENST00000285681 ZGRF1Q86YA3 2104 aa16.21■□□□□ 0.19
USP25-202ENST00000285681 COLCA2A8K830 154 aa16.21■□□□□ 0.19
USP25-202ENST00000285681 LINC00587B1AMM8 73 aa16.21■□□□□ 0.19
USP25-202ENST00000285681 TCTEX1D4Q5JR98 221 aa16.21■□□□□ 0.19
USP25-202ENST00000285681 MALRD1Q5VYJ5 2156 aa16.21■□□□□ 0.19
USP25-202ENST00000285681 DOCK9Q9BZ29 2069 aa16.21■□□□□ 0.19
USP25-202ENST00000285681 RASL10AQ92737 203 aa16.21■□□□□ 0.18
USP25-202ENST00000285681 PTPRQQ9UMZ3 2332 aa16.2■□□□□ 0.18
USP25-202ENST00000285681 NDUFS7O75251 213 aa16.2■□□□□ 0.18
USP25-202ENST00000285681 DKK1O94907 266 aa16.2■□□□□ 0.18
USP25-202ENST00000285681 SPINK13Q1W4C9 94 aa16.2■□□□□ 0.18
USP25-202ENST00000285681 PHLDA1Q8WV24 401 aaPredicted RBP16.2■□□□□ 0.18
USP25-202ENST00000285681 PLEKHB2Q96CS7 222 aa16.2■□□□□ 0.18
USP25-202ENST00000285681 MST1LQ2TV78 715 aa16.2■□□□□ 0.18
USP25-202ENST00000285681 HOXA3O43365 443 aaPredicted RBP16.2■□□□□ 0.18
USP25-202ENST00000285681 AMN1Q8IY45 258 aa16.2■□□□□ 0.18
USP25-202ENST00000285681 ANAPC1Q9H1A4 1944 aa16.19■□□□□ 0.18
USP25-202ENST00000285681 TMEM238C9JI98 176 aa16.19■□□□□ 0.18
USP25-202ENST00000285681 ZNF134P52741 427 aa16.19■□□□□ 0.18
USP25-202ENST00000285681 JPT2Q9H910 190 aa16.19■□□□□ 0.18
USP25-202ENST00000285681 TDGF1P3P51864 188 aa16.19■□□□□ 0.18
USP25-202ENST00000285681 TPSG1Q9NRR2 321 aa16.19■□□□□ 0.18
USP25-202ENST00000285681 WT1-ASQ06250 92 aa16.19■□□□□ 0.18
USP25-202ENST00000285681 TMEM75Q8N9X5 138 aa16.19■□□□□ 0.18
USP25-202ENST00000285681 SPOCK3Q9BQ16 436 aa16.19■□□□□ 0.18
USP25-202ENST00000285681 TRBV19A0A075B6N1 114 aa16.18■□□□□ 0.18
USP25-202ENST00000285681 IGHV2-5P01817 119 aa16.18■□□□□ 0.18
USP25-202ENST00000285681 IGHV4-39P01824 125 aa16.18■□□□□ 0.18
USP25-202ENST00000285681 C6orf226Q5I0X4 101 aa16.18■□□□□ 0.18
USP25-202ENST00000285681 DMRTC2Q8IXT2 367 aaPredicted RBP16.18■□□□□ 0.18
USP25-202ENST00000285681 C22orf46C9J442 243 aa16.18■□□□□ 0.18
USP25-202ENST00000285681 IGKV1-39P01597 117 aa16.18■□□□□ 0.18
USP25-202ENST00000285681 IGKV1D-39P04432 117 aa16.18■□□□□ 0.18
USP25-202ENST00000285681 ELANEP08246 267 aa16.18■□□□□ 0.18
USP25-202ENST00000285681 RHODO00212 210 aa16.18■□□□□ 0.18
USP25-202ENST00000285681 DIAPH2-AS1Q14236 149 aa16.17■□□□□ 0.18
USP25-202ENST00000285681 C10orf126Q8N4M7 172 aa16.17■□□□□ 0.18
USP25-202ENST00000285681 GFRA4Q9GZZ7 299 aa16.17■□□□□ 0.18
USP25-202ENST00000285681 IGLV3-1P01715 115 aa16.17■□□□□ 0.18
USP25-202ENST00000285681 FAM90A2PQ658T7 463 aa16.17■□□□□ 0.18
USP25-202ENST00000285681 ORAOV1Q8WV07 137 aa16.17■□□□□ 0.18
USP25-202ENST00000285681 TMEM158Q8WZ71 300 aa16.17■□□□□ 0.18
USP25-202ENST00000285681 MCRIP2Q9BUT9 160 aaKnown RBP16.17■□□□□ 0.18
USP25-202ENST00000285681 CST9LQ9H4G1 147 aa16.17■□□□□ 0.18
USP25-202ENST00000285681 PLXNA2O75051 1894 aa16.17■□□□□ 0.18
USP25-202ENST00000285681 HELZP42694 1942 aaKnown RBP16.17■□□□□ 0.18
USP25-202ENST00000285681 TRAV13-1A0A0B4J241 112 aa16.17■□□□□ 0.18
USP25-202ENST00000285681 PFN1P07737 140 aaKnown RBP16.17■□□□□ 0.18
USP25-202ENST00000285681 HIST3H2BBQ8N257 126 aa16.17■□□□□ 0.18
USP25-202ENST00000285681 NOTCH2Q04721 2471 aa16.17■□□□□ 0.18
USP25-202ENST00000285681 SMKR1H3BMG3 65 aa16.16■□□□□ 0.18
USP25-202ENST00000285681 PAX4O43316 350 aa16.16■□□□□ 0.18
USP25-202ENST00000285681 OR2K2Q8NGT1 345 aa16.16■□□□□ 0.18
USP25-202ENST00000285681 KNCNA6PVL3 124 aa16.16■□□□□ 0.18
USP25-202ENST00000285681 UBE2CO00762 179 aa16.16■□□□□ 0.18
USP25-202ENST00000285681 C8orf86Q6ZUL3 223 aa16.16■□□□□ 0.18
USP25-202ENST00000285681 ACACBO00763 2458 aa16.16■□□□□ 0.18
USP25-202ENST00000285681 DAD1P61803 113 aa16.16■□□□□ 0.18
USP25-202ENST00000285681 IGHV2-70P01814 119 aa16.16■□□□□ 0.18
USP25-202ENST00000285681 PAX9P55771 341 aa16.16■□□□□ 0.18
USP25-202ENST00000285681 NDUFAF3Q9BU61 184 aa16.16■□□□□ 0.18
USP25-202ENST00000285681 TRPT1Q86TN4 253 aaKnown RBP16.15■□□□□ 0.18
USP25-202ENST00000285681 E9PQ18 207 aa16.15■□□□□ 0.18
USP25-202ENST00000285681 F5H768 121 aa16.15■□□□□ 0.18
USP25-202ENST00000285681 M0R2P5 195 aa16.15■□□□□ 0.18
USP25-202ENST00000285681 FAM120AOSQ5T036 256 aa16.15■□□□□ 0.18
USP25-202ENST00000285681 HSD52Q0P140 79 aa16.14■□□□□ 0.17
USP25-202ENST00000285681 MRPL27Q9P0M9 148 aaKnown RBP16.14■□□□□ 0.17
USP25-202ENST00000285681 SS18Q15532 418 aa16.14■□□□□ 0.17
USP25-202ENST00000285681 ZNF492Q9P255 531 aa16.14■□□□□ 0.17
USP25-202ENST00000285681 SHANK1Q9Y566 2161 aa16.14■□□□□ 0.17
USP25-202ENST00000285681 KLK9Q9UKQ9 250 aa16.14■□□□□ 0.17
USP25-202ENST00000285681 GGTLC3B5MD39 225 aa16.13■□□□□ 0.17
USP25-202ENST00000285681 CTSZQ9UBR2 303 aa16.13■□□□□ 0.17
USP25-202ENST00000285681 C21orf62-AS1Q17RA5 79 aa16.13■□□□□ 0.17
USP25-202ENST00000285681 ERG28Q9UKR5 140 aa16.13■□□□□ 0.17
USP25-202ENST00000285681 PRB1P04280 392 aa16.13■□□□□ 0.17
USP25-202ENST00000285681 DEFB112Q30KQ8 113 aa16.13■□□□□ 0.17
USP25-202ENST00000285681 TMEM256Q8N2U0 113 aa16.12■□□□□ 0.17
USP25-202ENST00000285681 LY6G5BQ8NDX9 201 aa16.12■□□□□ 0.17
USP25-202ENST00000285681 IGHV1OR15-1A0A075B7D0 117 aa16.12■□□□□ 0.17
USP25-202ENST00000285681 FRMPD3Q5JV73 1810 aa16.12■□□□□ 0.17
USP25-202ENST00000285681 H3BRN7 92 aa16.12■□□□□ 0.17
USP25-202ENST00000285681 DEFB113Q30KQ7 82 aa16.12■□□□□ 0.17
USP25-202ENST00000285681 APOC4P55056 127 aa16.12■□□□□ 0.17
USP25-202ENST00000285681 NPC2P61916 151 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms